RNA–Protein interactions for RNA: ENST00000588472.6

SDF2-207, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 681 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-207ENST00000588472 HNF4AP41235 474 aa8.41□□□□□ -1.06
SDF2-207ENST00000588472 AVPR1BP47901 424 aa8.41□□□□□ -1.06
SDF2-207ENST00000588472 CCR8P51685 355 aa8.41□□□□□ -1.06
SDF2-207ENST00000588472 EMP2P54851 167 aa8.41□□□□□ -1.06
SDF2-207ENST00000588472 AP1S2P56377 157 aa8.41□□□□□ -1.06
SDF2-207ENST00000588472 SNRPNP63162 240 aaKnown RBP8.41□□□□□ -1.06
SDF2-207ENST00000588472 POU4F1Q01851 419 aa8.41□□□□□ -1.06
SDF2-207ENST00000588472 CSHL1Q14406 222 aa8.41□□□□□ -1.06
SDF2-207ENST00000588472 SLMAPQ14BN4 828 aa8.41□□□□□ -1.06
SDF2-207ENST00000588472 EFTUD2Q15029 972 aaKnown RBP eCLIP8.41□□□□□ -1.06
SDF2-207ENST00000588472 UAP1Q16222 522 aaPredicted RBP8.41□□□□□ -1.06
SDF2-207ENST00000588472 NDUFA9Q16795 377 aa8.41□□□□□ -1.06
SDF2-207ENST00000588472 WHAMMP3Q1A5X7 153 aa8.41□□□□□ -1.06
SDF2-207ENST00000588472 FBXO48Q5FWF7 155 aa8.41□□□□□ -1.06
SDF2-207ENST00000588472 CATSPEREQ5SY80 951 aa8.41□□□□□ -1.06
SDF2-207ENST00000588472 KIRREL2Q6UWL6 708 aa8.41□□□□□ -1.06
SDF2-207ENST00000588472 LCTLQ6UWM7 567 aa8.41□□□□□ -1.06
SDF2-207ENST00000588472 RAPH1Q70E73 1250 aa8.41□□□□□ -1.06
SDF2-207ENST00000588472 PRSS41Q7RTY9 318 aa8.41□□□□□ -1.06
SDF2-207ENST00000588472 ZNF572Q7Z3I7 529 aaPredicted RBP8.41□□□□□ -1.06
SDF2-207ENST00000588472 ASPGQ86U10 573 aa8.41□□□□□ -1.06
SDF2-207ENST00000588472 THOC6Q86W42 341 aaKnown RBP8.41□□□□□ -1.06
SDF2-207ENST00000588472 GALNT16Q8N428 558 aa8.41□□□□□ -1.06
SDF2-207ENST00000588472 KCT2Q8NC54 265 aa8.41□□□□□ -1.06
SDF2-207ENST00000588472 ZNF740Q8NDX6 193 aa8.41□□□□□ -1.06
SDF2-207ENST00000588472 OR56A3Q8NH54 315 aa8.41□□□□□ -1.06
SDF2-207ENST00000588472 SLC13A3Q8WWT9 602 aa8.41□□□□□ -1.06
SDF2-207ENST00000588472 EXT2Q93063 718 aa8.41□□□□□ -1.06
SDF2-207ENST00000588472 NEIL2Q969S2 332 aa8.41□□□□□ -1.06
SDF2-207ENST00000588472 FBXL8Q96CD0 374 aa8.41□□□□□ -1.06
SDF2-207ENST00000588472 TSPAN17Q96FV3 270 aa8.41□□□□□ -1.06
SDF2-207ENST00000588472 PDLIM5Q96HC4 596 aaKnown RBP8.41□□□□□ -1.06
SDF2-207ENST00000588472 OR4K3Q96R72 315 aa8.41□□□□□ -1.06
SDF2-207ENST00000588472 RBBP8Q99708 897 aa8.41□□□□□ -1.06
SDF2-207ENST00000588472 CPNE1Q99829 537 aa8.41□□□□□ -1.06
SDF2-207ENST00000588472 WDR54Q9H977 334 aa8.41□□□□□ -1.06
SDF2-207ENST00000588472 LRRC4CQ9HCJ2 640 aa8.41□□□□□ -1.06
SDF2-207ENST00000588472 ATP13A2Q9NQ11 1180 aa8.41□□□□□ -1.06
SDF2-207ENST00000588472 HCN3Q9P1Z3 774 aa8.41□□□□□ -1.06
SDF2-207ENST00000588472 NXT1Q9UKK6 140 aaKnown RBP8.41□□□□□ -1.06
SDF2-207ENST00000588472 PLAAQ9Y263 795 aa8.41□□□□□ -1.06
SDF2-207ENST00000588472 SLC22A14Q9Y267 594 aa8.41□□□□□ -1.06
SDF2-207ENST00000588472 ZNF451Q9Y4E5 1061 aa8.41□□□□□ -1.06
SDF2-207ENST00000588472 HS3ST3B1Q9Y662 390 aa8.41□□□□□ -1.06
SDF2-207ENST00000588472 SPENQ96T58 3664 aaKnown RBP8.41□□□□□ -1.06
SDF2-207ENST00000588472 MED13Q9UHV7 2174 aa8.4□□□□□ -1.06
SDF2-207ENST00000588472 OR2W5A6NFC9 320 aa8.4□□□□□ -1.06
SDF2-207ENST00000588472 ZNF860A6NHJ4 632 aa8.4□□□□□ -1.06
SDF2-207ENST00000588472 VSTM2BA6NLU5 285 aa8.4□□□□□ -1.06
SDF2-207ENST00000588472 IDSB3KWA1 339 aa8.4□□□□□ -1.06
SDF2-207ENST00000588472 SOCS6O14544 535 aa8.4□□□□□ -1.06
SDF2-207ENST00000588472 PRPF4O43172 522 aaKnown RBP eCLIP8.4□□□□□ -1.062e-6■■■■□ 23.9
SDF2-207ENST00000588472 NDUFS4O43181 175 aa8.4□□□□□ -1.06
SDF2-207ENST00000588472 FOXS1O43638 330 aa8.4□□□□□ -1.06
SDF2-207ENST00000588472 JRKO75564 520 aa8.4□□□□□ -1.06
SDF2-207ENST00000588472 ONECUT2O95948 504 aa8.4□□□□□ -1.06
SDF2-207ENST00000588472 IGHEP01854 428 aa8.4□□□□□ -1.06
SDF2-207ENST00000588472 ENO2P09104 434 aaPredicted RBP8.4□□□□□ -1.06
SDF2-207ENST00000588472 GSTA2P09210 222 aa8.4□□□□□ -1.06
SDF2-207ENST00000588472 STMN1P16949 149 aa8.4□□□□□ -1.06
SDF2-207ENST00000588472 IL1RNP18510 177 aa8.4□□□□□ -1.06
SDF2-207ENST00000588472 STX2P32856 288 aa8.4□□□□□ -1.06
SDF2-207ENST00000588472 SPRP35270 261 aaPredicted RBP8.4□□□□□ -1.06
SDF2-207ENST00000588472 SLC26A3P40879 764 aa8.4□□□□□ -1.06
SDF2-207ENST00000588472 GDF5P43026 501 aa8.4□□□□□ -1.06
SDF2-207ENST00000588472 EMP3P54852 163 aa8.4□□□□□ -1.06
SDF2-207ENST00000588472 EEF1A2Q05639 463 aaKnown RBP8.4□□□□□ -1.06
SDF2-207ENST00000588472 DSG2Q14126 1118 aa8.4□□□□□ -1.06
SDF2-207ENST00000588472 RBBP5Q15291 538 aaKnown RBP8.4□□□□□ -1.06
SDF2-207ENST00000588472 OR4D1Q15615 310 aa8.4□□□□□ -1.06
SDF2-207ENST00000588472 PPP1R3AQ16821 1122 aa8.4□□□□□ -1.06
SDF2-207ENST00000588472 TUBB8Q3ZCM7 444 aa8.4□□□□□ -1.06
SDF2-207ENST00000588472 C4orf17Q53FE4 359 aa8.4□□□□□ -1.06
SDF2-207ENST00000588472 GRTP1Q5TC63 336 aa8.4□□□□□ -1.06
SDF2-207ENST00000588472 IRAK1BP1Q5VVH5 260 aa8.4□□□□□ -1.06
SDF2-207ENST00000588472 GARNL3Q5VVW2 1013 aa8.4□□□□□ -1.06
SDF2-207ENST00000588472 VN1R4Q7Z5H5 301 aa8.4□□□□□ -1.06
SDF2-207ENST00000588472 CMC1Q7Z7K0 106 aa8.4□□□□□ -1.06
SDF2-207ENST00000588472 TMPRSS11BQ86T26 416 aa8.4□□□□□ -1.06
SDF2-207ENST00000588472 GPSM1Q86YR5 675 aa8.4□□□□□ -1.06
SDF2-207ENST00000588472 SHISA5Q8N114 240 aa8.4□□□□□ -1.06
SDF2-207ENST00000588472 TBC1D19Q8N5T2 526 aa8.4□□□□□ -1.06
SDF2-207ENST00000588472 AMER3Q8N944 861 aa8.4□□□□□ -1.06
SDF2-207ENST00000588472 MFSD9Q8NBP5 474 aa8.4□□□□□ -1.06
SDF2-207ENST00000588472 NOA1Q8NC60 698 aaKnown RBP8.4□□□□□ -1.06
SDF2-207ENST00000588472 CAMKVQ8NCB2 501 aa8.4□□□□□ -1.06
SDF2-207ENST00000588472 SLC5A11Q8WWX8 675 aa8.4□□□□□ -1.06
SDF2-207ENST00000588472 ESAMQ96AP7 390 aa8.4□□□□□ -1.06
SDF2-207ENST00000588472 TRIM44Q96DX7 344 aaPredicted RBP8.4□□□□□ -1.06
SDF2-207ENST00000588472 MOCOSQ96EN8 888 aa8.4□□□□□ -1.06
SDF2-207ENST00000588472 SLC26A1Q9H2B4 701 aa8.4□□□□□ -1.06
SDF2-207ENST00000588472 SPNS1Q9H2V7 528 aa8.4□□□□□ -1.06
SDF2-207ENST00000588472 ZNF160Q9HCG1 818 aa8.4□□□□□ -1.06
SDF2-207ENST00000588472 SEMA3GQ9NS98 782 aa8.4□□□□□ -1.06
SDF2-207ENST00000588472 MKL2Q9ULH7 1088 aa8.4□□□□□ -1.06
SDF2-207ENST00000588472 NOVA2Q9UNW9 492 aaKnown RBP8.4□□□□□ -1.06
SDF2-207ENST00000588472 OARD1Q9Y530 152 aa8.4□□□□□ -1.06
SDF2-207ENST00000588472 PCDHGA9Q9Y5G4 932 aaKnown RBP8.4□□□□□ -1.06
SDF2-207ENST00000588472 UBR5O95071 2799 aaPredicted RBP8.39□□□□□ -1.07
SDF2-207ENST00000588472 HEATR5BQ9P2D3 2071 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms