RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 HRH2P25021 359 aa10.83□□□□□ -0.68
VMP1-207ENST00000588131 HSD3B2P26439 372 aa10.83□□□□□ -0.68
VMP1-207ENST00000588131 PIK3CBP42338 1070 aa10.83□□□□□ -0.68
VMP1-207ENST00000588131 GPR3P46089 330 aa10.83□□□□□ -0.68
VMP1-207ENST00000588131 PPM1FP49593 454 aaPredicted RBP10.83□□□□□ -0.68
VMP1-207ENST00000588131 RPL38P63173 70 aaKnown RBP10.83□□□□□ -0.68
VMP1-207ENST00000588131 CFHR1Q03591 330 aa10.83□□□□□ -0.68
VMP1-207ENST00000588131 CYP4F3Q08477 520 aa10.83□□□□□ -0.68
VMP1-207ENST00000588131 SPEM2Q0P670 501 aa10.83□□□□□ -0.68
VMP1-207ENST00000588131 ZIC1Q15915 447 aa10.83□□□□□ -0.68
VMP1-207ENST00000588131 AP5B1Q2VPB7 878 aa10.83□□□□□ -0.68
VMP1-207ENST00000588131 AMZ1Q400G9 498 aa10.83□□□□□ -0.68
VMP1-207ENST00000588131 ATP6AP1LQ52LC2 224 aa10.83□□□□□ -0.68
VMP1-207ENST00000588131 RFTN2Q52LD8 501 aaPredicted RBP10.83□□□□□ -0.68
VMP1-207ENST00000588131 OGFOD2Q6N063 350 aa10.83□□□□□ -0.68
VMP1-207ENST00000588131 FIGLAQ6QHK4 219 aa10.83□□□□□ -0.68
VMP1-207ENST00000588131 FAM92BQ6ZTR7 304 aa10.83□□□□□ -0.68
VMP1-207ENST00000588131 SPRED1Q7Z699 444 aa10.83□□□□□ -0.68
VMP1-207ENST00000588131 CLNKQ7Z7G1 428 aa10.83□□□□□ -0.68
VMP1-207ENST00000588131 ZFAND4Q86XD8 727 aa10.83□□□□□ -0.68
VMP1-207ENST00000588131 HOMEZQ8IX15 550 aa10.83□□□□□ -0.68
VMP1-207ENST00000588131 GBP7Q8N8V2 638 aaPredicted RBP10.83□□□□□ -0.68
VMP1-207ENST00000588131 BAHD1Q8TBE0 780 aaPredicted RBP10.83□□□□□ -0.68
VMP1-207ENST00000588131 ATOH1Q92858 354 aaPredicted RBP10.83□□□□□ -0.68
VMP1-207ENST00000588131 SLC45A3Q96JT2 553 aa10.83□□□□□ -0.68
VMP1-207ENST00000588131 PPP3R2Q96LZ3 170 aa10.83□□□□□ -0.68
VMP1-207ENST00000588131 TGM7Q96PF1 710 aa10.83□□□□□ -0.68
VMP1-207ENST00000588131 FCRL4Q96PJ5 515 aa10.83□□□□□ -0.68
VMP1-207ENST00000588131 PRRX2Q99811 253 aa10.83□□□□□ -0.68
VMP1-207ENST00000588131 C1orf50Q9BV19 199 aa10.83□□□□□ -0.68
VMP1-207ENST00000588131 CCDC106Q9BWC9 280 aa10.83□□□□□ -0.68
VMP1-207ENST00000588131 PITHD1Q9GZP4 211 aaPredicted RBP10.83□□□□□ -0.68
VMP1-207ENST00000588131 OR51B5Q9H339 312 aa10.83□□□□□ -0.68
VMP1-207ENST00000588131 BRF2Q9HAW0 419 aa10.83□□□□□ -0.68
VMP1-207ENST00000588131 LRTM1Q9HBL6 345 aa10.83□□□□□ -0.68
VMP1-207ENST00000588131 PRM3Q9NNZ6 103 aa10.83□□□□□ -0.68
VMP1-207ENST00000588131 RXFP3Q9NSD7 469 aa10.83□□□□□ -0.68
VMP1-207ENST00000588131 DNAAF2Q9NVR5 837 aaKnown RBP10.83□□□□□ -0.68
VMP1-207ENST00000588131 ANKMY1Q9P2S6 941 aa10.83□□□□□ -0.68
VMP1-207ENST00000588131 SLC12A4Q9UP95 1085 aa10.83□□□□□ -0.68
VMP1-207ENST00000588131 TRIM33Q9UPN9 1127 aa10.83□□□□□ -0.68
VMP1-207ENST00000588131 PCDHGA4Q9Y5G9 962 aa10.83□□□□□ -0.68
VMP1-207ENST00000588131 KLK4Q9Y5K2 254 aa10.83□□□□□ -0.68
VMP1-207ENST00000588131 COPG1Q9Y678 874 aaKnown RBP10.83□□□□□ -0.68
VMP1-207ENST00000588131 EME2A4GXA9 379 aaPredicted RBP10.82□□□□□ -0.68
VMP1-207ENST00000588131 ERICH4A6NGS2 130 aa10.82□□□□□ -0.68
VMP1-207ENST00000588131 ANKDD1BA6NHY2 528 aa10.82□□□□□ -0.68
VMP1-207ENST00000588131 CDX4O14627 284 aaPredicted RBP10.82□□□□□ -0.68
VMP1-207ENST00000588131 CAPN5O15484 640 aaPredicted RBP10.82□□□□□ -0.68
VMP1-207ENST00000588131 KIF1CO43896 1103 aaKnown RBP10.82□□□□□ -0.68
VMP1-207ENST00000588131 SH3BP5O60239 455 aa10.82□□□□□ -0.68
VMP1-207ENST00000588131 CTSVO60911 334 aa10.82□□□□□ -0.68
VMP1-207ENST00000588131 UBOX5O94941 541 aa10.82□□□□□ -0.68
VMP1-207ENST00000588131 FKBP9O95302 570 aa10.82□□□□□ -0.68
VMP1-207ENST00000588131 CD1EP15812 388 aa10.82□□□□□ -0.68
VMP1-207ENST00000588131 PNLIPP16233 465 aa10.82□□□□□ -0.68
VMP1-207ENST00000588131 CDH3P22223 829 aa10.82□□□□□ -0.68
VMP1-207ENST00000588131 CD1CP29017 333 aa10.82□□□□□ -0.68
VMP1-207ENST00000588131 CSF2RBP32927 897 aa10.82□□□□□ -0.68
VMP1-207ENST00000588131 GRK3P35626 688 aa10.82□□□□□ -0.68
VMP1-207ENST00000588131 DIO3P55073 304 aa10.82□□□□□ -0.68
VMP1-207ENST00000588131 ERVK-8P63133 956 aa10.82□□□□□ -0.68
VMP1-207ENST00000588131 PHEXP78562 749 aa10.82□□□□□ -0.68
VMP1-207ENST00000588131 EMX2Q04743 252 aa10.82□□□□□ -0.68
VMP1-207ENST00000588131 TBL3Q12788 808 aaKnown RBP10.82□□□□□ -0.68
VMP1-207ENST00000588131 KIAA0040Q15053 153 aa10.82□□□□□ -0.68
VMP1-207ENST00000588131 ZSCAN26Q16670 478 aa10.82□□□□□ -0.68
VMP1-207ENST00000588131 C10orf62Q5T681 223 aaPredicted RBP10.82□□□□□ -0.68
VMP1-207ENST00000588131 FBXO42Q6P3S6 717 aa10.82□□□□□ -0.68
VMP1-207ENST00000588131 DBX2Q6ZNG2 339 aa10.82□□□□□ -0.68
VMP1-207ENST00000588131 PRR23CQ6ZRP0 262 aa10.82□□□□□ -0.68
VMP1-207ENST00000588131 SPATA19Q7Z5L4 167 aa10.82□□□□□ -0.68
VMP1-207ENST00000588131 TREML1Q86YW5 311 aa10.82□□□□□ -0.68
VMP1-207ENST00000588131 CPSF7Q8N684 471 aaKnown RBP10.82□□□□□ -0.68
VMP1-207ENST00000588131 FNDC5Q8NAU1 212 aa10.82□□□□□ -0.68
VMP1-207ENST00000588131 MFSD9Q8NBP5 474 aa10.82□□□□□ -0.68
VMP1-207ENST00000588131 CREB3L4Q8TEY5 395 aa10.82□□□□□ -0.68
VMP1-207ENST00000588131 NCSTNQ92542 709 aa10.82□□□□□ -0.68
VMP1-207ENST00000588131 FAM122AQ96E09 287 aa10.82□□□□□ -0.68
VMP1-207ENST00000588131 CMTM7Q96FZ5 175 aa10.82□□□□□ -0.68
VMP1-207ENST00000588131 AHCYL2Q96HN2 611 aaKnown RBP10.82□□□□□ -0.68
VMP1-207ENST00000588131 TRAPPC9Q96Q05 1148 aa10.82□□□□□ -0.68
VMP1-207ENST00000588131 MAP3K3Q99759 626 aa10.82□□□□□ -0.68
VMP1-207ENST00000588131 SARGQ9BW04 601 aa10.82□□□□□ -0.68
VMP1-207ENST00000588131 MS4A8Q9BY19 250 aa10.82□□□□□ -0.68
VMP1-207ENST00000588131 AICDAQ9GZX7 198 aa10.82□□□□□ -0.68
VMP1-207ENST00000588131 RAB33BQ9H082 229 aa10.82□□□□□ -0.68
VMP1-207ENST00000588131 SEMA6CQ9H3T2 930 aa10.82□□□□□ -0.68
VMP1-207ENST00000588131 AIG1Q9NVV5 245 aa10.82□□□□□ -0.68
VMP1-207ENST00000588131 C1orf109Q9NX04 203 aa10.82□□□□□ -0.68
VMP1-207ENST00000588131 TMEM9Q9P0T7 183 aa10.82□□□□□ -0.68
VMP1-207ENST00000588131 VPS29Q9UBQ0 182 aa10.82□□□□□ -0.68
VMP1-207ENST00000588131 EPHA6Q9UF33 1036 aa10.82□□□□□ -0.68
VMP1-207ENST00000588131 PILRAQ9UKJ1 303 aa10.82□□□□□ -0.68
VMP1-207ENST00000588131 POLR3HQ9Y535 204 aaPredicted RBP10.82□□□□□ -0.68
VMP1-207ENST00000588131 PCDHGB2Q9Y5G2 931 aa10.82□□□□□ -0.68
VMP1-207ENST00000588131 HEATR5BQ9P2D3 2071 aa10.81□□□□□ -0.68
VMP1-207ENST00000588131 A0A0J9YVX5 310 aa10.81□□□□□ -0.68
VMP1-207ENST00000588131 SLC9B1P1A6NJY1 282 aa10.81□□□□□ -0.68
VMP1-207ENST00000588131 CAPN14A8MX76 684 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms