RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 PHKG1Q16816 387 aa13.58□□□□□ -0.24
VMP1-206ENST00000587945 ZNF787Q6DD87 383 aa13.58□□□□□ -0.24
VMP1-206ENST00000587945 UGT3A1Q6NUS8 523 aa13.58□□□□□ -0.24
VMP1-206ENST00000587945 TMEM205Q6UW68 189 aa13.58□□□□□ -0.24
VMP1-206ENST00000587945 LANCL3Q6ZV70 420 aa13.58□□□□□ -0.24
VMP1-206ENST00000587945 MAMDC2Q7Z304 686 aaPredicted RBP13.58□□□□□ -0.24
VMP1-206ENST00000587945 MYO1HQ8N1T3 1032 aa13.58□□□□□ -0.24
VMP1-206ENST00000587945 ZCCHC10Q8TBK6 192 aa13.58□□□□□ -0.24
VMP1-206ENST00000587945 LINGO1Q96FE5 620 aa13.58□□□□□ -0.24
VMP1-206ENST00000587945 VN1R1Q9GZP7 353 aa13.58□□□□□ -0.24
VMP1-206ENST00000587945 ZNF700Q9H0M5 742 aa13.58□□□□□ -0.24
VMP1-206ENST00000587945 PARVBQ9HBI1 364 aa13.58□□□□□ -0.24
VMP1-206ENST00000587945 RIC8BQ9NVN3 520 aa13.58□□□□□ -0.24
VMP1-206ENST00000587945 TAS2R13Q9NYV9 303 aa13.58□□□□□ -0.24
VMP1-206ENST00000587945 HIVEP3Q5T1R4 2406 aa13.57□□□□□ -0.24
VMP1-206ENST00000587945 KCNE1BA0A087WTH5 132 aa13.57□□□□□ -0.24
VMP1-206ENST00000587945 DYTNA2CJ06 578 aa13.57□□□□□ -0.24
VMP1-206ENST00000587945 SEC24DO94855 1032 aaPredicted RBP13.57□□□□□ -0.24
VMP1-206ENST00000587945 TTC4O95801 387 aa13.57□□□□□ -0.24
VMP1-206ENST00000587945 C8GP07360 202 aa13.57□□□□□ -0.24
VMP1-206ENST00000587945 C8orf89P0DMQ9 161 aa13.57□□□□□ -0.24
VMP1-206ENST00000587945 CDH1P12830 882 aa13.57□□□□□ -0.24
VMP1-206ENST00000587945 FDXRP22570 491 aa13.57□□□□□ -0.24
VMP1-206ENST00000587945 HRH2P25021 359 aa13.57□□□□□ -0.24
VMP1-206ENST00000587945 SRSF11Q05519 484 aaKnown RBP13.57□□□□□ -0.24
VMP1-206ENST00000587945 ZXDCQ2QGD7 858 aaPredicted RBP13.57□□□□□ -0.24
VMP1-206ENST00000587945 MINDY4Q4G0A6 757 aa13.57□□□□□ -0.24
VMP1-206ENST00000587945 SPANXN3Q5MJ09 141 aa13.57□□□□□ -0.24
VMP1-206ENST00000587945 MFSD4BQ5TF39 518 aa13.57□□□□□ -0.24
VMP1-206ENST00000587945 TMEM214Q6NUQ4 689 aaKnown RBP13.57□□□□□ -0.24
VMP1-206ENST00000587945 FAM180AQ6UWF9 173 aa13.57□□□□□ -0.24
VMP1-206ENST00000587945 C17orf64Q86WR6 236 aa13.57□□□□□ -0.24
VMP1-206ENST00000587945 PALM2Q8IXS6 379 aa13.57□□□□□ -0.24
VMP1-206ENST00000587945 KCT2Q8NC54 265 aa13.57□□□□□ -0.24
VMP1-206ENST00000587945 OR51Q1Q8NH59 317 aa13.57□□□□□ -0.24
VMP1-206ENST00000587945 CFAP36Q96G28 342 aa13.57□□□□□ -0.24
VMP1-206ENST00000587945 IMMP1LQ96LU5 166 aa13.57□□□□□ -0.24
VMP1-206ENST00000587945 PCBD2Q9H0N5 130 aa13.57□□□□□ -0.24
VMP1-206ENST00000587945 PPANQ9NQ55 473 aaKnown RBP13.57□□□□□ -0.24
VMP1-206ENST00000587945 H0YIG0 161 aa13.56□□□□□ -0.24
VMP1-206ENST00000587945 CES2O00748 559 aa13.56□□□□□ -0.24
VMP1-206ENST00000587945 SLC16A5O15375 505 aa13.56□□□□□ -0.24
VMP1-206ENST00000587945 LRRTM2O43300 516 aa13.56□□□□□ -0.24
VMP1-206ENST00000587945 NSA2O95478 260 aaKnown RBP13.56□□□□□ -0.24
VMP1-206ENST00000587945 TSPAN12O95859 305 aa13.56□□□□□ -0.24
VMP1-206ENST00000587945 WDPCPO95876 746 aa13.56□□□□□ -0.24
VMP1-206ENST00000587945 EDN3P14138 238 aa13.56□□□□□ -0.24
VMP1-206ENST00000587945 IVDP26440 423 aa13.56□□□□□ -0.24
VMP1-206ENST00000587945 XCR1P46094 333 aa13.56□□□□□ -0.24
VMP1-206ENST00000587945 TNFSF10P50591 281 aa13.56□□□□□ -0.24
VMP1-206ENST00000587945 SP140Q13342 867 aa13.56□□□□□ -0.24
VMP1-206ENST00000587945 TEDDM1Q5T9Z0 273 aa13.56□□□□□ -0.24
VMP1-206ENST00000587945 LRRC8EQ6NSJ5 796 aa13.56□□□□□ -0.24
VMP1-206ENST00000587945 TRMT10BQ6PF06 316 aaKnown RBP13.56□□□□□ -0.24
VMP1-206ENST00000587945 RIPOR1Q6ZS17 1223 aa13.56□□□□□ -0.24
VMP1-206ENST00000587945 ASPGQ86U10 573 aa13.56□□□□□ -0.24
VMP1-206ENST00000587945 SLC26A11Q86WA9 606 aa13.56□□□□□ -0.24
VMP1-206ENST00000587945 PDSS2Q86YH6 399 aa13.56□□□□□ -0.24
VMP1-206ENST00000587945 CNTN4Q8IWV2 1026 aa13.56□□□□□ -0.24
VMP1-206ENST00000587945 BCORP1Q8N888 145 aa13.56□□□□□ -0.24
VMP1-206ENST00000587945 GPATCH11Q8N954 259 aa13.56□□□□□ -0.24
VMP1-206ENST00000587945 CAMKVQ8NCB2 501 aa13.56□□□□□ -0.24
VMP1-206ENST00000587945 METTL21AQ8WXB1 218 aa13.56□□□□□ -0.24
VMP1-206ENST00000587945 HAS2Q92819 552 aa13.56□□□□□ -0.24
VMP1-206ENST00000587945 PYCR2Q96C36 320 aa13.56□□□□□ -0.24
VMP1-206ENST00000587945 TM4SF19Q96DZ7 209 aa13.56□□□□□ -0.24
VMP1-206ENST00000587945 THAP11Q96EK4 314 aa13.56□□□□□ -0.24
VMP1-206ENST00000587945 CERS2Q96G23 380 aa13.56□□□□□ -0.24
VMP1-206ENST00000587945 TAAR6Q96RI8 345 aa13.56□□□□□ -0.24
VMP1-206ENST00000587945 CYTH2Q99418 400 aa13.56□□□□□ -0.24
VMP1-206ENST00000587945 WDR83Q9BRX9 315 aaKnown RBP13.56□□□□□ -0.24
VMP1-206ENST00000587945 SGPP1Q9BX95 441 aa13.56□□□□□ -0.24
VMP1-206ENST00000587945 RBCK1Q9BYM8 510 aa13.56□□□□□ -0.24
VMP1-206ENST00000587945 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.56□□□□□ -0.24
VMP1-206ENST00000587945 KCNF1Q9H3M0 494 aa13.56□□□□□ -0.24
VMP1-206ENST00000587945 OLAHQ9NV23 265 aa13.56□□□□□ -0.24
VMP1-206ENST00000587945 CHMP2BQ9UQN3 213 aa13.56□□□□□ -0.24
VMP1-206ENST00000587945 CNTRLQ7Z7A1 2325 aa13.56□□□□□ -0.24
VMP1-206ENST00000587945 TRAV17A0A0B4J275 112 aa13.55□□□□□ -0.24
VMP1-206ENST00000587945 ZNF860A6NHJ4 632 aa13.55□□□□□ -0.24
VMP1-206ENST00000587945 A8MUI8 341 aa13.55□□□□□ -0.24
VMP1-206ENST00000587945 PCDH17O14917 1159 aa13.55□□□□□ -0.24
VMP1-206ENST00000587945 ZSCAN12O43309 604 aa13.55□□□□□ -0.24
VMP1-206ENST00000587945 RDH16O75452 317 aa13.55□□□□□ -0.24
VMP1-206ENST00000587945 NPPBP16860 134 aa13.55□□□□□ -0.24
VMP1-206ENST00000587945 ELK3P41970 407 aa13.55□□□□□ -0.24
VMP1-206ENST00000587945 MEF2AQ02078 507 aaPredicted RBP13.55□□□□□ -0.24
VMP1-206ENST00000587945 PDAP1Q13442 181 aaKnown RBP13.55□□□□□ -0.24
VMP1-206ENST00000587945 HECTD2Q5U5R9 776 aa13.55□□□□□ -0.24
VMP1-206ENST00000587945 CAPN13Q6MZZ7 669 aaPredicted RBP13.55□□□□□ -0.24
VMP1-206ENST00000587945 HIBCHQ6NVY1 386 aaPredicted RBP13.55□□□□□ -0.24
VMP1-206ENST00000587945 RPUSD3Q6P087 351 aaKnown RBP13.55□□□□□ -0.24
VMP1-206ENST00000587945 LCTLQ6UWM7 567 aa13.55□□□□□ -0.24
VMP1-206ENST00000587945 KIAA0408Q6ZU52 694 aa13.55□□□□□ -0.24
VMP1-206ENST00000587945 CPEB2Q7Z5Q1 589 aaKnown RBP13.55□□□□□ -0.24
VMP1-206ENST00000587945 PCGF5Q86SE9 256 aa13.55□□□□□ -0.24
VMP1-206ENST00000587945 KLHL7Q8IXQ5 586 aa13.55□□□□□ -0.24
VMP1-206ENST00000587945 SLC13A3Q8WWT9 602 aa13.55□□□□□ -0.24
VMP1-206ENST00000587945 MOCOSQ96EN8 888 aa13.55□□□□□ -0.24
VMP1-206ENST00000587945 CAPZA3Q96KX2 299 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms