RNA–Protein interactions for RNA: ENST00000587525.5

CACNA1A-209, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 1 (best)

Gene CACNA1A, Length 3,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-209ENST00000587525 KLHL17Q6TDP4 642 aa13.31□□□□□ -0.28
CACNA1A-209ENST00000587525 C11orf65Q8NCR3 313 aa13.31□□□□□ -0.28
CACNA1A-209ENST00000587525 FEVQ99581 238 aa13.31□□□□□ -0.28
CACNA1A-209ENST00000587525 ARMC1Q9NVT9 282 aa13.31□□□□□ -0.28
CACNA1A-209ENST00000587525 UCKL1Q9NWZ5 548 aa13.31□□□□□ -0.28
CACNA1A-209ENST00000587525 GPR83Q9NYM4 423 aa13.31□□□□□ -0.28
CACNA1A-209ENST00000587525 WBP11Q9Y2W2 641 aaKnown RBP13.31□□□□□ -0.28
CACNA1A-209ENST00000587525 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.31□□□□□ -0.28
CACNA1A-209ENST00000587525 AQP9O43315 295 aa13.31□□□□□ -0.28
CACNA1A-209ENST00000587525 GMFGO60234 142 aa13.31□□□□□ -0.28
CACNA1A-209ENST00000587525 AP2A2O94973 939 aa13.31□□□□□ -0.28
CACNA1A-209ENST00000587525 HTR1BP28222 390 aa13.31□□□□□ -0.28
CACNA1A-209ENST00000587525 MLLT1Q03111 559 aaPredicted RBP13.31□□□□□ -0.28
CACNA1A-209ENST00000587525 ILF2Q12905 390 aaKnown RBP13.31□□□□□ -0.28
CACNA1A-209ENST00000587525 MRPL28Q13084 256 aaKnown RBP13.31□□□□□ -0.28
CACNA1A-209ENST00000587525 CCSMST1Q4G0I0 132 aa13.31□□□□□ -0.28
CACNA1A-209ENST00000587525 SPARTQ8N0X7 666 aa13.31□□□□□ -0.28
CACNA1A-209ENST00000587525 FLCNQ8NFG4 579 aa13.31□□□□□ -0.28
CACNA1A-209ENST00000587525 OR10G2Q8NGC3 310 aa13.31□□□□□ -0.28
CACNA1A-209ENST00000587525 OR9Q2Q8NGE9 314 aa13.31□□□□□ -0.28
CACNA1A-209ENST00000587525 GTF2H4Q92759 462 aa13.31□□□□□ -0.28
CACNA1A-209ENST00000587525 NLNQ9BYT8 704 aa13.31□□□□□ -0.28
CACNA1A-209ENST00000587525 TTTY10Q9BZA0 68 aa13.31□□□□□ -0.28
CACNA1A-209ENST00000587525 FAM220BPB1ANY3 271 aa13.3□□□□□ -0.28
CACNA1A-209ENST00000587525 E7EQ34 232 aa13.3□□□□□ -0.28
CACNA1A-209ENST00000587525 SPTBP11277 2137 aa13.3□□□□□ -0.28
CACNA1A-209ENST00000587525 HTR1EP28566 365 aa13.3□□□□□ -0.28
CACNA1A-209ENST00000587525 CCR7P32248 378 aa13.3□□□□□ -0.28
CACNA1A-209ENST00000587525 CTBSQ01459 385 aa13.3□□□□□ -0.28
CACNA1A-209ENST00000587525 ATAD3BQ5T9A4 648 aa13.3□□□□□ -0.28
CACNA1A-209ENST00000587525 ERAP2Q6P179 960 aa13.3□□□□□ -0.28
CACNA1A-209ENST00000587525 CYHR1Q6ZMK1 362 aa13.3□□□□□ -0.28
CACNA1A-209ENST00000587525 MRPL10Q7Z7H8 261 aaKnown RBP13.3□□□□□ -0.28
CACNA1A-209ENST00000587525 THOC6Q86W42 341 aaKnown RBP13.3□□□□□ -0.28
CACNA1A-209ENST00000587525 RNF130Q86XS8 419 aa13.3□□□□□ -0.28
CACNA1A-209ENST00000587525 PGBD3Q8N328 593 aa13.3□□□□□ -0.28
CACNA1A-209ENST00000587525 ATL1Q8WXF7 558 aa13.3□□□□□ -0.28
CACNA1A-209ENST00000587525 TBX5Q99593 518 aa13.3□□□□□ -0.28
CACNA1A-209ENST00000587525 P2RY13Q9BPV8 354 aa13.3□□□□□ -0.28
CACNA1A-209ENST00000587525 NEURL2Q9BR09 285 aa13.3□□□□□ -0.28
CACNA1A-209ENST00000587525 SLC35A5Q9BS91 424 aa13.3□□□□□ -0.28
CACNA1A-209ENST00000587525 NEK6Q9HC98 313 aa13.3□□□□□ -0.28
CACNA1A-209ENST00000587525 MRPS23Q9Y3D9 190 aaKnown RBP13.3□□□□□ -0.28
CACNA1A-209ENST00000587525 H3BSH0 61 aa13.3□□□□□ -0.28
CACNA1A-209ENST00000587525 AP1G1O43747 822 aa13.3□□□□□ -0.28
CACNA1A-209ENST00000587525 MMP20O60882 483 aa13.3□□□□□ -0.28
CACNA1A-209ENST00000587525 SLC16A8O95907 504 aa13.3□□□□□ -0.28
CACNA1A-209ENST00000587525 PEX11BO96011 259 aa13.3□□□□□ -0.28
CACNA1A-209ENST00000587525 SLC26A3P40879 764 aa13.3□□□□□ -0.28
CACNA1A-209ENST00000587525 OR2B6P58173 313 aa13.3□□□□□ -0.28
CACNA1A-209ENST00000587525 NKX3-2P78367 333 aa13.3□□□□□ -0.28
CACNA1A-209ENST00000587525 DOC2AQ14183 400 aa13.3□□□□□ -0.28
CACNA1A-209ENST00000587525 SKIV2LQ15477 1246 aaKnown RBP13.3□□□□□ -0.28
CACNA1A-209ENST00000587525 PDZK1Q5T2W1 519 aa13.3□□□□□ -0.28
CACNA1A-209ENST00000587525 CEP68Q76N32 757 aa13.3□□□□□ -0.28
CACNA1A-209ENST00000587525 C12orf76Q8N812 135 aaPredicted RBP13.3□□□□□ -0.28
CACNA1A-209ENST00000587525 RAD18Q9NS91 495 aa13.3□□□□□ -0.28
CACNA1A-209ENST00000587525 CABIN1Q9Y6J0 2220 aa13.3□□□□□ -0.28
CACNA1A-209ENST00000587525 LEFTY1O75610 366 aa13.3□□□□□ -0.28
CACNA1A-209ENST00000587525 SNRPD2P62316 118 aaKnown RBP13.3□□□□□ -0.28
CACNA1A-209ENST00000587525 CATSPEREQ5SY80 951 aa13.3□□□□□ -0.28
CACNA1A-209ENST00000587525 C1QTNF12Q5T7M4 302 aa13.3□□□□□ -0.28
CACNA1A-209ENST00000587525 MANEALQ5VSG8 457 aa13.3□□□□□ -0.28
CACNA1A-209ENST00000587525 SDE2Q6IQ49 451 aa13.3□□□□□ -0.28
CACNA1A-209ENST00000587525 CCBE1Q6UXH8 406 aaPredicted RBP13.3□□□□□ -0.28
CACNA1A-209ENST00000587525 TICAM1Q8IUC6 712 aa13.3□□□□□ -0.28
CACNA1A-209ENST00000587525 ZFP41Q8N8Y5 198 aa13.3□□□□□ -0.28
CACNA1A-209ENST00000587525 CLIP3Q96DZ5 547 aa13.3□□□□□ -0.28
CACNA1A-209ENST00000587525 ZNF641Q96N77 438 aaPredicted RBP13.3□□□□□ -0.28
CACNA1A-209ENST00000587525 PHOX2BQ99453 314 aa13.3□□□□□ -0.28
CACNA1A-209ENST00000587525 XKR8Q9H6D3 395 aa13.3□□□□□ -0.28
CACNA1A-209ENST00000587525 KAT8Q9H7Z6 458 aaKnown RBP13.3□□□□□ -0.28
CACNA1A-209ENST00000587525 H2AFY2Q9P0M6 372 aaPredicted RBP13.3□□□□□ -0.28
CACNA1A-209ENST00000587525 GREB1LQ9C091 1923 aaPredicted RBP13.29□□□□□ -0.28
CACNA1A-209ENST00000587525 TTC34A8MYJ7 566 aa13.29□□□□□ -0.28
CACNA1A-209ENST00000587525 WASH3PC4AMC7 463 aa13.29□□□□□ -0.28
CACNA1A-209ENST00000587525 MYL12BO14950 172 aa13.29□□□□□ -0.28
CACNA1A-209ENST00000587525 GGT1P19440 569 aa13.29□□□□□ -0.28
CACNA1A-209ENST00000587525 KDELR2P33947 212 aa13.29□□□□□ -0.28
CACNA1A-209ENST00000587525 SRP54P61011 504 aaKnown RBP13.29□□□□□ -0.28
CACNA1A-209ENST00000587525 SMU1Q2TAY7 513 aa13.29□□□□□ -0.28
CACNA1A-209ENST00000587525 BORAQ6PGQ7 559 aa13.29□□□□□ -0.28
CACNA1A-209ENST00000587525 SMARCD3Q6STE5 483 aa13.29□□□□□ -0.28
CACNA1A-209ENST00000587525 CRTC1Q6UUV9 634 aa13.29□□□□□ -0.28
CACNA1A-209ENST00000587525 NAGSQ8N159 534 aa13.29□□□□□ -0.28
CACNA1A-209ENST00000587525 STARD8Q92502 1023 aa13.29□□□□□ -0.28
CACNA1A-209ENST00000587525 LGALS12Q96DT0 336 aa13.29□□□□□ -0.28
CACNA1A-209ENST00000587525 IRF2BPLQ9H1B7 796 aa13.29□□□□□ -0.28
CACNA1A-209ENST00000587525 ZDHHC3Q9NYG2 299 aa13.29□□□□□ -0.28
CACNA1A-209ENST00000587525 PTBP2Q9UKA9 531 aaKnown RBP13.29□□□□□ -0.28
CACNA1A-209ENST00000587525 FBXW2Q9UKT8 454 aa13.29□□□□□ -0.28
CACNA1A-209ENST00000587525 PIPSLA2A3N6 862 aa13.29□□□□□ -0.28
CACNA1A-209ENST00000587525 FAM25AB3EWG3 89 aa13.29□□□□□ -0.28
CACNA1A-209ENST00000587525 FAM25CB3EWG5 89 aa13.29□□□□□ -0.28
CACNA1A-209ENST00000587525 FAM25GB3EWG6 89 aa13.29□□□□□ -0.28
CACNA1A-209ENST00000587525 GNB5O14775 395 aa13.29□□□□□ -0.28
CACNA1A-209ENST00000587525 PSIP1O75475 530 aaKnown RBP13.29□□□□□ -0.28
CACNA1A-209ENST00000587525 PDHA2P29803 388 aa13.29□□□□□ -0.28
CACNA1A-209ENST00000587525 MTA1Q13330 715 aa13.29□□□□□ -0.28
CACNA1A-209ENST00000587525 KCT2Q8NC54 265 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms