RNA–Protein interactions for RNA: ENST00000587201.5

TPM4-206, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-206ENST00000587201 ASPGQ86U10 573 aa16.8■□□□□ 0.28
TPM4-206ENST00000587201 OR9A4Q8NGU2 314 aa16.8■□□□□ 0.28
TPM4-206ENST00000587201 TM9SF4Q92544 642 aa16.8■□□□□ 0.28
TPM4-206ENST00000587201 PNPLA2Q96AD5 504 aa16.8■□□□□ 0.28
TPM4-206ENST00000587201 C8orf44Q96CB5 159 aa16.8■□□□□ 0.28
TPM4-206ENST00000587201 GPAMQ9HCL2 828 aa16.8■□□□□ 0.28
TPM4-206ENST00000587201 TXNDC16Q9P2K2 825 aa16.8■□□□□ 0.28
TPM4-206ENST00000587201 IDSB3KWA1 339 aa16.79■□□□□ 0.28
TPM4-206ENST00000587201 CDC7O00311 574 aa16.79■□□□□ 0.28
TPM4-206ENST00000587201 LCMT2O60294 686 aaKnown RBP16.79■□□□□ 0.28
TPM4-206ENST00000587201 VPS4BO75351 444 aa16.79■□□□□ 0.28
TPM4-206ENST00000587201 CXCR2P25025 360 aa16.79■□□□□ 0.28
TPM4-206ENST00000587201 CD97P48960 835 aa16.79■□□□□ 0.28
TPM4-206ENST00000587201 MEF2AQ02078 507 aaPredicted RBP16.79■□□□□ 0.28
TPM4-206ENST00000587201 CAV1Q03135 178 aa16.79■□□□□ 0.28
TPM4-206ENST00000587201 PPP1R3AQ16821 1122 aa16.79■□□□□ 0.28
TPM4-206ENST00000587201 FAAH2Q6GMR7 532 aa16.79■□□□□ 0.28
TPM4-206ENST00000587201 C3orf62Q6ZUJ4 267 aa16.79■□□□□ 0.28
TPM4-206ENST00000587201 CEP97Q8IW35 865 aa16.79■□□□□ 0.28
TPM4-206ENST00000587201 ZADH2Q8N4Q0 377 aa16.79■□□□□ 0.28
TPM4-206ENST00000587201 Q8NA96 180 aa16.79■□□□□ 0.28
TPM4-206ENST00000587201 SLC13A3Q8WWT9 602 aa16.79■□□□□ 0.28
TPM4-206ENST00000587201 ANKRD7Q92527 254 aa16.79■□□□□ 0.28
TPM4-206ENST00000587201 TM4SF19Q96DZ7 209 aa16.79■□□□□ 0.28
TPM4-206ENST00000587201 THOC3Q96J01 351 aaKnown RBP16.79■□□□□ 0.28
TPM4-206ENST00000587201 OR4K3Q96R72 315 aa16.79■□□□□ 0.28
TPM4-206ENST00000587201 MESP1Q9BRJ9 268 aa16.79■□□□□ 0.28
TPM4-206ENST00000587201 FAM129AQ9BZQ8 928 aa16.79■□□□□ 0.28
TPM4-206ENST00000587201 TGIF2Q9GZN2 237 aa16.79■□□□□ 0.28
TPM4-206ENST00000587201 ZNF160Q9HCG1 818 aa16.79■□□□□ 0.28
TPM4-206ENST00000587201 MAP10Q9P2G4 905 aa16.79■□□□□ 0.28
TPM4-206ENST00000587201 VPS4AQ9UN37 437 aa16.79■□□□□ 0.28
TPM4-206ENST00000587201 NUP210LQ5VU65 1888 aa16.78■□□□□ 0.28
TPM4-206ENST00000587201 CXorf49A8MYA2 514 aaPredicted RBP16.78■□□□□ 0.28
TPM4-206ENST00000587201 H0YIG0 161 aa16.78■□□□□ 0.28
TPM4-206ENST00000587201 NSA2O95478 260 aaKnown RBP16.78■□□□□ 0.28
TPM4-206ENST00000587201 HPP00738 406 aa16.78■□□□□ 0.28
TPM4-206ENST00000587201 IL1RNP18510 177 aa16.78■□□□□ 0.28
TPM4-206ENST00000587201 SNRPNP63162 240 aaKnown RBP16.78■□□□□ 0.28
TPM4-206ENST00000587201 POU4F1Q01851 419 aa16.78■□□□□ 0.28
TPM4-206ENST00000587201 CSHL1Q14406 222 aa16.78■□□□□ 0.28
TPM4-206ENST00000587201 INPP5JQ15735 1006 aaPredicted RBP16.78■□□□□ 0.28
TPM4-206ENST00000587201 CATSPEREQ5SY80 951 aa16.78■□□□□ 0.28
TPM4-206ENST00000587201 AGAP7PQ5VUJ5 663 aa16.78■□□□□ 0.28
TPM4-206ENST00000587201 ATG9BQ674R7 924 aa16.78■□□□□ 0.28
TPM4-206ENST00000587201 TMEM214Q6NUQ4 689 aaKnown RBP16.78■□□□□ 0.28
TPM4-206ENST00000587201 IGFL3Q6UXB1 125 aa16.78■□□□□ 0.28
TPM4-206ENST00000587201 FRA10AC1Q70Z53 315 aa16.78■□□□□ 0.28
TPM4-206ENST00000587201 PRSS41Q7RTY9 318 aa16.78■□□□□ 0.28
TPM4-206ENST00000587201 CCDC25Q86WR0 208 aa16.78■□□□□ 0.28
TPM4-206ENST00000587201 TBC1D19Q8N5T2 526 aa16.78■□□□□ 0.28
TPM4-206ENST00000587201 MFSD9Q8NBP5 474 aa16.78■□□□□ 0.28
TPM4-206ENST00000587201 KCT2Q8NC54 265 aa16.78■□□□□ 0.28
TPM4-206ENST00000587201 ABHD11Q8NFV4 315 aa16.78■□□□□ 0.28
TPM4-206ENST00000587201 ZCCHC10Q8TBK6 192 aa16.78■□□□□ 0.28
TPM4-206ENST00000587201 ANKRD49Q8WVL7 239 aa16.78■□□□□ 0.28
TPM4-206ENST00000587201 SLC5A11Q8WWX8 675 aa16.78■□□□□ 0.28
TPM4-206ENST00000587201 AGAP4Q96P64 663 aa16.78■□□□□ 0.28
TPM4-206ENST00000587201 EGFL8Q99944 293 aa16.78■□□□□ 0.28
TPM4-206ENST00000587201 MCMBPQ9BTE3 642 aa16.78■□□□□ 0.28
TPM4-206ENST00000587201 LHPPQ9H008 270 aa16.78■□□□□ 0.28
TPM4-206ENST00000587201 POPDC3Q9HBV1 291 aa16.78■□□□□ 0.28
TPM4-206ENST00000587201 ZBTB20Q9HC78 741 aaPredicted RBP16.78■□□□□ 0.28
TPM4-206ENST00000587201 ANKHQ9HCJ1 492 aa16.78■□□□□ 0.28
TPM4-206ENST00000587201 CTNNAL1Q9UBT7 734 aa16.78■□□□□ 0.28
TPM4-206ENST00000587201 MKL2Q9ULH7 1088 aa16.78■□□□□ 0.28
TPM4-206ENST00000587201 MTO1Q9Y2Z2 717 aaKnown RBP16.78■□□□□ 0.28
TPM4-206ENST00000587201 DYRK1BQ9Y463 629 aa16.78■□□□□ 0.28
TPM4-206ENST00000587201 OARD1Q9Y530 152 aa16.78■□□□□ 0.28
TPM4-206ENST00000587201 NBASA2RRP1 2371 aa16.77■□□□□ 0.28
TPM4-206ENST00000587201 NSG1A0A0A6YYJ2 146 aa16.77■□□□□ 0.28
TPM4-206ENST00000587201 TCRBV9S1A1TA0A576 114 aa16.77■□□□□ 0.28
TPM4-206ENST00000587201 OR1F1O43749 312 aa16.77■□□□□ 0.28
TPM4-206ENST00000587201 GSTA2P09210 222 aa16.77■□□□□ 0.28
TPM4-206ENST00000587201 SLC35G6P0C7Q6 338 aa16.77■□□□□ 0.28
TPM4-206ENST00000587201 EEF1A2Q05639 463 aaKnown RBP16.77■□□□□ 0.28
TPM4-206ENST00000587201 CKAP4Q07065 602 aaKnown RBP16.77■□□□□ 0.28
TPM4-206ENST00000587201 Q0VFX4 171 aa16.77■□□□□ 0.28
TPM4-206ENST00000587201 USP10Q14694 798 aaKnown RBP16.77■□□□□ 0.28
TPM4-206ENST00000587201 TSNQ15631 228 aaKnown RBP16.77■□□□□ 0.28
TPM4-206ENST00000587201 PLEKHN1Q494U1 663 aaPredicted RBP16.77■□□□□ 0.28
TPM4-206ENST00000587201 MFSD4BQ5TF39 518 aa16.77■□□□□ 0.28
TPM4-206ENST00000587201 NDUFAF7Q7L592 441 aa16.77■□□□□ 0.28
TPM4-206ENST00000587201 ZNF572Q7Z3I7 529 aaPredicted RBP16.77■□□□□ 0.28
TPM4-206ENST00000587201 ADAMTSL2Q86TH1 951 aa16.77■□□□□ 0.28
TPM4-206ENST00000587201 THOC6Q86W42 341 aaKnown RBP16.77■□□□□ 0.28
TPM4-206ENST00000587201 ZC3H7AQ8IWR0 971 aaKnown RBP16.77■□□□□ 0.28
TPM4-206ENST00000587201 OR4K1Q8NGD4 311 aa16.77■□□□□ 0.28
TPM4-206ENST00000587201 FBXO25Q8TCJ0 367 aa16.77■□□□□ 0.28
TPM4-206ENST00000587201 NEIL2Q969S2 332 aa16.77■□□□□ 0.28
TPM4-206ENST00000587201 TSPAN17Q96FV3 270 aa16.77■□□□□ 0.28
TPM4-206ENST00000587201 TSNARE1Q96NA8 513 aa16.77■□□□□ 0.28
TPM4-206ENST00000587201 CPNE1Q99829 537 aa16.77■□□□□ 0.28
TPM4-206ENST00000587201 ILKAPQ9H0C8 392 aaPredicted RBP16.77■□□□□ 0.28
TPM4-206ENST00000587201 CAB39LQ9H9S4 337 aa16.77■□□□□ 0.28
TPM4-206ENST00000587201 B3GNT3Q9Y2A9 372 aa16.77■□□□□ 0.28
TPM4-206ENST00000587201 UBR5O95071 2799 aaPredicted RBP16.76■□□□□ 0.27
TPM4-206ENST00000587201 FAM159BA6NKW6 160 aa16.76■□□□□ 0.27
TPM4-206ENST00000587201 SGK494L7N484 410 aa16.76■□□□□ 0.27
TPM4-206ENST00000587201 PCDH17O14917 1159 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms