RNA–Protein interactions for RNA: ENST00000584773.5

SRSF1-208, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5 BASIC

Gene SRSF1, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-208ENST00000584773 ACPPP15309 386 aa17.09■□□□□ 0.33
SRSF1-208ENST00000584773 EMP2P54851 167 aa17.09■□□□□ 0.33
SRSF1-208ENST00000584773 RPS15AP62244 130 aaKnown RBP17.09■□□□□ 0.33
SRSF1-208ENST00000584773 TRADDQ15628 312 aa17.09■□□□□ 0.33
SRSF1-208ENST00000584773 PPP1R3AQ16821 1122 aa17.09■□□□□ 0.33
SRSF1-208ENST00000584773 CATSPEREQ5SY80 951 aa17.09■□□□□ 0.33
SRSF1-208ENST00000584773 ATG9BQ674R7 924 aa17.09■□□□□ 0.33
SRSF1-208ENST00000584773 CAPN13Q6MZZ7 669 aaPredicted RBP17.09■□□□□ 0.33
SRSF1-208ENST00000584773 SLC26A11Q86WA9 606 aa17.09■□□□□ 0.33
SRSF1-208ENST00000584773 ATCAYQ86WG3 371 aa17.09■□□□□ 0.33
SRSF1-208ENST00000584773 ZNF740Q8NDX6 193 aa17.09■□□□□ 0.33
SRSF1-208ENST00000584773 OR56A3Q8NH54 315 aa17.09■□□□□ 0.33
SRSF1-208ENST00000584773 ANKRD49Q8WVL7 239 aa17.09■□□□□ 0.33
SRSF1-208ENST00000584773 NACC2Q96BF6 587 aa17.09■□□□□ 0.33
SRSF1-208ENST00000584773 MOCOSQ96EN8 888 aa17.09■□□□□ 0.33
SRSF1-208ENST00000584773 THOC3Q96J01 351 aaKnown RBP17.09■□□□□ 0.33
SRSF1-208ENST00000584773 PCBD2Q9H0N5 130 aa17.09■□□□□ 0.33
SRSF1-208ENST00000584773 HCN3Q9P1Z3 774 aa17.09■□□□□ 0.33
SRSF1-208ENST00000584773 SCN2AQ99250 2005 aa17.09■□□□□ 0.33
SRSF1-208ENST00000584773 PRRC2CQ9Y520 2896 aaKnown RBP17.08■□□□□ 0.33
SRSF1-208ENST00000584773 CTAGE15A4D2H0 777 aa17.08■□□□□ 0.32
SRSF1-208ENST00000584773 OR2W5A6NFC9 320 aa17.08■□□□□ 0.32
SRSF1-208ENST00000584773 SGK494L7N484 410 aa17.08■□□□□ 0.32
SRSF1-208ENST00000584773 VPS4BO75351 444 aa17.08■□□□□ 0.32
SRSF1-208ENST00000584773 MRPL49Q13405 166 aaKnown RBP17.08■□□□□ 0.32
SRSF1-208ENST00000584773 UBAP2LQ14157 1087 aaKnown RBP17.08■□□□□ 0.32
SRSF1-208ENST00000584773 C18orf21Q32NC0 220 aaPredicted RBP17.08■□□□□ 0.32
SRSF1-208ENST00000584773 DUPD1Q68J44 220 aa17.08■□□□□ 0.32
SRSF1-208ENST00000584773 TMEM214Q6NUQ4 689 aaKnown RBP17.08■□□□□ 0.32
SRSF1-208ENST00000584773 IGFL3Q6UXB1 125 aa17.08■□□□□ 0.32
SRSF1-208ENST00000584773 ASPGQ86U10 573 aa17.08■□□□□ 0.32
SRSF1-208ENST00000584773 CTAGE6Q86UF2 777 aa17.08■□□□□ 0.32
SRSF1-208ENST00000584773 CUZD1Q86UP6 607 aa17.08■□□□□ 0.32
SRSF1-208ENST00000584773 HPS6Q86YV9 775 aa17.08■□□□□ 0.32
SRSF1-208ENST00000584773 PYROXD1Q8WU10 500 aa17.08■□□□□ 0.32
SRSF1-208ENST00000584773 FBXL8Q96CD0 374 aa17.08■□□□□ 0.32
SRSF1-208ENST00000584773 TSNARE1Q96NA8 513 aa17.08■□□□□ 0.32
SRSF1-208ENST00000584773 MCMBPQ9BTE3 642 aa17.08■□□□□ 0.32
SRSF1-208ENST00000584773 CAB39LQ9H9S4 337 aa17.08■□□□□ 0.32
SRSF1-208ENST00000584773 MKKSQ9NPJ1 570 aaPredicted RBP17.08■□□□□ 0.32
SRSF1-208ENST00000584773 WHRNQ9P202 907 aa17.08■□□□□ 0.32
SRSF1-208ENST00000584773 VPS4AQ9UN37 437 aa17.08■□□□□ 0.32
SRSF1-208ENST00000584773 B3GNT3Q9Y2A9 372 aa17.08■□□□□ 0.32
SRSF1-208ENST00000584773 KCNE1BA0A087WTH5 132 aa17.07■□□□□ 0.32
SRSF1-208ENST00000584773 CLEC18AA5D8T8 446 aa17.07■□□□□ 0.32
SRSF1-208ENST00000584773 PABPN1LA6NDY0 278 aaKnown RBP17.07■□□□□ 0.32
SRSF1-208ENST00000584773 TXNDC9O14530 226 aa17.07■□□□□ 0.32
SRSF1-208ENST00000584773 PRPF4O43172 522 aaKnown RBP eCLIP17.07■□□□□ 0.322e-8■■■□□ 16.4
SRSF1-208ENST00000584773 KLHL18O94889 574 aa17.07■□□□□ 0.32
SRSF1-208ENST00000584773 B3GALT4O96024 378 aa17.07■□□□□ 0.32
SRSF1-208ENST00000584773 HPP00738 406 aa17.07■□□□□ 0.32
SRSF1-208ENST00000584773 HEXBP07686 556 aa17.07■□□□□ 0.32
SRSF1-208ENST00000584773 CCND1P24385 295 aa17.07■□□□□ 0.32
SRSF1-208ENST00000584773 HRH2P25021 359 aa17.07■□□□□ 0.32
SRSF1-208ENST00000584773 GMPRP36959 345 aa17.07■□□□□ 0.32
SRSF1-208ENST00000584773 AP1S2P56377 157 aa17.07■□□□□ 0.32
SRSF1-208ENST00000584773 ETF1P62495 437 aaKnown RBP17.07■□□□□ 0.32
SRSF1-208ENST00000584773 FAM53BQ14153 422 aa17.07■□□□□ 0.32
SRSF1-208ENST00000584773 NDUFA9Q16795 377 aa17.07■□□□□ 0.32
SRSF1-208ENST00000584773 CLEC18BQ6UXF7 455 aa17.07■□□□□ 0.32
SRSF1-208ENST00000584773 LINC00696Q6ZRV3 163 aa17.07■□□□□ 0.32
SRSF1-208ENST00000584773 PDSS2Q86YH6 399 aa17.07■□□□□ 0.32
SRSF1-208ENST00000584773 SPATA6LQ8N4H0 392 aa17.07■□□□□ 0.32
SRSF1-208ENST00000584773 CISD2Q8N5K1 135 aaKnown RBP17.07■□□□□ 0.32
SRSF1-208ENST00000584773 CLEC18CQ8NCF0 446 aa17.07■□□□□ 0.32
SRSF1-208ENST00000584773 NEIL2Q969S2 332 aa17.07■□□□□ 0.32
SRSF1-208ENST00000584773 SNRNP40Q96DI7 357 aaKnown RBP17.07■□□□□ 0.32
SRSF1-208ENST00000584773 TM4SF19Q96DZ7 209 aa17.07■□□□□ 0.32
SRSF1-208ENST00000584773 VPS39Q96JC1 886 aa17.07■□□□□ 0.32
SRSF1-208ENST00000584773 RBCK1Q9BYM8 510 aa17.07■□□□□ 0.32
SRSF1-208ENST00000584773 LHPPQ9H008 270 aa17.07■□□□□ 0.32
SRSF1-208ENST00000584773 ILKAPQ9H0C8 392 aaPredicted RBP17.07■□□□□ 0.32
SRSF1-208ENST00000584773 RHOJQ9H4E5 214 aa17.07■□□□□ 0.32
SRSF1-208ENST00000584773 C14orf105Q9NVL8 296 aa17.07■□□□□ 0.32
SRSF1-208ENST00000584773 MKL2Q9ULH7 1088 aa17.07■□□□□ 0.32
SRSF1-208ENST00000584773 NTNG1Q9Y2I2 539 aa17.07■□□□□ 0.32
SRSF1-208ENST00000584773 MTO1Q9Y2Z2 717 aaKnown RBP17.07■□□□□ 0.32
SRSF1-208ENST00000584773 LRRK2Q5S007 2527 aa17.07■□□□□ 0.32
SRSF1-208ENST00000584773 USP9XQ93008 2570 aaPredicted RBP17.07■□□□□ 0.32
SRSF1-208ENST00000584773 ESPL1Q14674 2120 aa17.07■□□□□ 0.32
SRSF1-208ENST00000584773 ZNF860A6NHJ4 632 aa17.06■□□□□ 0.32
SRSF1-208ENST00000584773 TCP11X1B4DZS4 312 aa17.06■□□□□ 0.32
SRSF1-208ENST00000584773 RDH16O75452 317 aa17.06■□□□□ 0.32
SRSF1-208ENST00000584773 BMP10O95393 424 aa17.06■□□□□ 0.32
SRSF1-208ENST00000584773 AVPR1BP47901 424 aa17.06■□□□□ 0.32
SRSF1-208ENST00000584773 CALCOCO2Q13137 446 aa17.06■□□□□ 0.32
SRSF1-208ENST00000584773 TSNQ15631 228 aaKnown RBP17.06■□□□□ 0.32
SRSF1-208ENST00000584773 AGAP7PQ5VUJ5 663 aa17.06■□□□□ 0.32
SRSF1-208ENST00000584773 Q6ZS92 163 aa17.06■□□□□ 0.32
SRSF1-208ENST00000584773 LANCL3Q6ZV70 420 aa17.06■□□□□ 0.32
SRSF1-208ENST00000584773 ZADH2Q8N4Q0 377 aa17.06■□□□□ 0.32
SRSF1-208ENST00000584773 MFSD9Q8NBP5 474 aa17.06■□□□□ 0.32
SRSF1-208ENST00000584773 GALNT11Q8NCW6 608 aa17.06■□□□□ 0.32
SRSF1-208ENST00000584773 BBOF1Q8ND07 529 aa17.06■□□□□ 0.32
SRSF1-208ENST00000584773 ABHD11Q8NFV4 315 aa17.06■□□□□ 0.32
SRSF1-208ENST00000584773 SLC13A3Q8WWT9 602 aa17.06■□□□□ 0.32
SRSF1-208ENST00000584773 PDLIM5Q96HC4 596 aaKnown RBP17.06■□□□□ 0.32
SRSF1-208ENST00000584773 AGAP4Q96P64 663 aa17.06■□□□□ 0.32
SRSF1-208ENST00000584773 HAUS8Q9BT25 410 aa17.06■□□□□ 0.32
SRSF1-208ENST00000584773 TRIM54Q9BYV2 358 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms