RNA–Protein interactions for RNA: ENST00000583683.1

NDEL1-217, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 2

Gene NDEL1, Length 1,802 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-217ENST00000583683 CSTF3Q12996 717 aaKnown RBP17.4■□□□□ 0.38
NDEL1-217ENST00000583683 TMEM198Q66K66 360 aa17.4■□□□□ 0.38
NDEL1-217ENST00000583683 FCRL6Q6DN72 434 aa17.4■□□□□ 0.38
NDEL1-217ENST00000583683 FIGLAQ6QHK4 219 aa17.4■□□□□ 0.38
NDEL1-217ENST00000583683 GBP7Q8N8V2 638 aaPredicted RBP17.4■□□□□ 0.38
NDEL1-217ENST00000583683 NCSTNQ92542 709 aa17.4■□□□□ 0.38
NDEL1-217ENST00000583683 AHCYL2Q96HN2 611 aaKnown RBP17.4■□□□□ 0.38
NDEL1-217ENST00000583683 NMUR2Q9GZQ4 415 aa17.4■□□□□ 0.38
NDEL1-217ENST00000583683 KLHL25Q9H0H3 589 aa17.4■□□□□ 0.38
NDEL1-217ENST00000583683 DMRT3Q9NQL9 472 aa17.4■□□□□ 0.38
NDEL1-217ENST00000583683 SEMA4GQ9NTN9 838 aa17.4■□□□□ 0.38
NDEL1-217ENST00000583683 ANKMY1Q9P2S6 941 aa17.4■□□□□ 0.38
NDEL1-217ENST00000583683 ASCC3Q8N3C0 2202 aaKnown RBP17.39■□□□□ 0.37
NDEL1-217ENST00000583683 COL5A1P20908 1838 aaPredicted RBP17.39■□□□□ 0.37
NDEL1-217ENST00000583683 CASC3O15234 703 aaKnown RBP17.39■□□□□ 0.37
NDEL1-217ENST00000583683 ZW10O43264 779 aa17.39■□□□□ 0.37
NDEL1-217ENST00000583683 DCTN3O75935 186 aa17.39■□□□□ 0.37
NDEL1-217ENST00000583683 LMNAP02545 664 aaKnown RBP17.39■□□□□ 0.37
NDEL1-217ENST00000583683 HSD3B1P14060 373 aa17.39■□□□□ 0.37
NDEL1-217ENST00000583683 HSD3B2P26439 372 aa17.39■□□□□ 0.37
NDEL1-217ENST00000583683 CD1CP29017 333 aa17.39■□□□□ 0.37
NDEL1-217ENST00000583683 BCL6P41182 706 aa17.39■□□□□ 0.37
NDEL1-217ENST00000583683 GRK6P43250 576 aa17.39■□□□□ 0.37
NDEL1-217ENST00000583683 SCTRP47872 440 aa17.39■□□□□ 0.37
NDEL1-217ENST00000583683 PPM1FP49593 454 aaPredicted RBP17.39■□□□□ 0.37
NDEL1-217ENST00000583683 GFERP55789 205 aa17.39■□□□□ 0.37
NDEL1-217ENST00000583683 NR6A1Q15406 480 aa17.39■□□□□ 0.37
NDEL1-217ENST00000583683 IMPG1Q17R60 797 aa17.39■□□□□ 0.37
NDEL1-217ENST00000583683 ATP6AP1LQ52LC2 224 aa17.39■□□□□ 0.37
NDEL1-217ENST00000583683 C6orf136Q5SQH8 315 aa17.39■□□□□ 0.37
NDEL1-217ENST00000583683 PERM1Q5SV97 790 aa17.39■□□□□ 0.37
NDEL1-217ENST00000583683 CHSY3Q70JA7 882 aa17.39■□□□□ 0.37
NDEL1-217ENST00000583683 YTHDF3Q7Z739 585 aaKnown RBP17.39■□□□□ 0.37
NDEL1-217ENST00000583683 BAHD1Q8TBE0 780 aaPredicted RBP17.39■□□□□ 0.37
NDEL1-217ENST00000583683 NAT6Q93015 286 aa17.39■□□□□ 0.37
NDEL1-217ENST00000583683 LRRC37BQ96QE4 947 aa17.39■□□□□ 0.37
NDEL1-217ENST00000583683 SEMA6CQ9H3T2 930 aa17.39■□□□□ 0.37
NDEL1-217ENST00000583683 SYNPO2LQ9H987 977 aa17.39■□□□□ 0.37
NDEL1-217ENST00000583683 ANKDD1BA6NHY2 528 aa17.38■□□□□ 0.37
NDEL1-217ENST00000583683 DUX1O43812 170 aa17.38■□□□□ 0.37
NDEL1-217ENST00000583683 PRAMEF10O60809 474 aa17.38■□□□□ 0.37
NDEL1-217ENST00000583683 ETHE1O95571 254 aa17.38■□□□□ 0.37
NDEL1-217ENST00000583683 SERPINA6P08185 405 aa17.38■□□□□ 0.37
NDEL1-217ENST00000583683 EZRP15311 586 aaKnown RBP17.38■□□□□ 0.37
NDEL1-217ENST00000583683 LBPP18428 481 aa17.38■□□□□ 0.37
NDEL1-217ENST00000583683 PRPH2P23942 346 aa17.38■□□□□ 0.37
NDEL1-217ENST00000583683 RPS13P62277 151 aaKnown RBP17.38■□□□□ 0.37
NDEL1-217ENST00000583683 CFHR1Q03591 330 aa17.38■□□□□ 0.37
NDEL1-217ENST00000583683 NAA25Q14CX7 972 aa17.38■□□□□ 0.37
NDEL1-217ENST00000583683 ZIC1Q15915 447 aa17.38■□□□□ 0.37
NDEL1-217ENST00000583683 AMZ1Q400G9 498 aa17.38■□□□□ 0.37
NDEL1-217ENST00000583683 GALNTL6Q49A17 601 aa17.38■□□□□ 0.37
NDEL1-217ENST00000583683 OGFOD2Q6N063 350 aa17.38■□□□□ 0.37
NDEL1-217ENST00000583683 FBXO42Q6P3S6 717 aa17.38■□□□□ 0.37
NDEL1-217ENST00000583683 FAM92BQ6ZTR7 304 aa17.38■□□□□ 0.37
NDEL1-217ENST00000583683 FITM2Q8N6M3 262 aa17.38■□□□□ 0.37
NDEL1-217ENST00000583683 TGM7Q96PF1 710 aa17.38■□□□□ 0.37
NDEL1-217ENST00000583683 MAP3K3Q99759 626 aa17.38■□□□□ 0.37
NDEL1-217ENST00000583683 EDEM2Q9BV94 578 aa17.38■□□□□ 0.37
NDEL1-217ENST00000583683 ADGRE2Q9UHX3 823 aa17.38■□□□□ 0.37
NDEL1-217ENST00000583683 TRIM33Q9UPN9 1127 aa17.38■□□□□ 0.37
NDEL1-217ENST00000583683 NPIPB8E9PQR5 432 aa17.37■□□□□ 0.37
NDEL1-217ENST00000583683 FCHO1O14526 889 aa17.37■□□□□ 0.37
NDEL1-217ENST00000583683 FLRT2O43155 660 aa17.37■□□□□ 0.37
NDEL1-217ENST00000583683 KIF1CO43896 1103 aaKnown RBP17.37■□□□□ 0.37
NDEL1-217ENST00000583683 CTSVO60911 334 aa17.37■□□□□ 0.37
NDEL1-217ENST00000583683 LRP3O75074 770 aa17.37■□□□□ 0.37
NDEL1-217ENST00000583683 RSL1D1O76021 490 aaKnown RBP17.37■□□□□ 0.37
NDEL1-217ENST00000583683 TBX6O95947 436 aaPredicted RBP17.37■□□□□ 0.37
NDEL1-217ENST00000583683 ALDOCP09972 364 aaKnown RBP17.37■□□□□ 0.37
NDEL1-217ENST00000583683 ST6GAL1P15907 406 aa17.37■□□□□ 0.37
NDEL1-217ENST00000583683 NCF2P19878 526 aaPredicted RBP17.37■□□□□ 0.37
NDEL1-217ENST00000583683 CDH3P22223 829 aa17.37■□□□□ 0.37
NDEL1-217ENST00000583683 HNRNPH1P31943 449 aaKnown RBP17.37■□□□□ 0.37
NDEL1-217ENST00000583683 CSF2RBP32927 897 aa17.37■□□□□ 0.37
NDEL1-217ENST00000583683 RELAQ04206 551 aa17.37■□□□□ 0.37
NDEL1-217ENST00000583683 CSRP2Q16527 193 aa17.37■□□□□ 0.37
NDEL1-217ENST00000583683 AP5B1Q2VPB7 878 aa17.37■□□□□ 0.37
NDEL1-217ENST00000583683 RFTN2Q52LD8 501 aaPredicted RBP17.37■□□□□ 0.37
NDEL1-217ENST00000583683 PPP3R2Q96LZ3 170 aa17.37■□□□□ 0.37
NDEL1-217ENST00000583683 FCRL4Q96PJ5 515 aa17.37■□□□□ 0.37
NDEL1-217ENST00000583683 TRAPPC9Q96Q05 1148 aa17.37■□□□□ 0.37
NDEL1-217ENST00000583683 MYLK2Q9H1R3 596 aa17.37■□□□□ 0.37
NDEL1-217ENST00000583683 PARD6AQ9NPB6 346 aa17.37■□□□□ 0.37
NDEL1-217ENST00000583683 C1GALT1Q9NS00 363 aa17.37■□□□□ 0.37
NDEL1-217ENST00000583683 NCDNQ9UBB6 729 aa17.37■□□□□ 0.37
NDEL1-217ENST00000583683 VPS29Q9UBQ0 182 aa17.37■□□□□ 0.37
NDEL1-217ENST00000583683 PILRAQ9UKJ1 303 aa17.37■□□□□ 0.37
NDEL1-217ENST00000583683 PPT2Q9UMR5 302 aa17.37■□□□□ 0.37
NDEL1-217ENST00000583683 SLC12A4Q9UP95 1085 aa17.37■□□□□ 0.37
NDEL1-217ENST00000583683 PCDHGA4Q9Y5G9 962 aa17.37■□□□□ 0.37
NDEL1-217ENST00000583683 CCDC22O60826 627 aa17.37■□□□□ 0.37
NDEL1-217ENST00000583683 TGFB1P01137 390 aa17.37■□□□□ 0.37
NDEL1-217ENST00000583683 AHRP35869 848 aa17.37■□□□□ 0.37
NDEL1-217ENST00000583683 RPS15AP62244 130 aaKnown RBP17.37■□□□□ 0.37
NDEL1-217ENST00000583683 CYP4F2P78329 520 aa17.37■□□□□ 0.37
NDEL1-217ENST00000583683 PHEXP78562 749 aa17.37■□□□□ 0.37
NDEL1-217ENST00000583683 DAB2P98082 770 aa17.37■□□□□ 0.37
NDEL1-217ENST00000583683 SLC14A1Q13336 389 aa17.37■□□□□ 0.37
NDEL1-217ENST00000583683 KIAA0040Q15053 153 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms