RNA–Protein interactions for RNA: ENST00000583454.1

TSEN54-209, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-209ENST00000583454 MLXIPLQ9NP71 852 aa23.73■■□□□ 1.39
TSEN54-209ENST00000583454 TEX15Q9BXT5 2789 aa23.72■■□□□ 1.39
TSEN54-209ENST00000583454 TRIM49D1C9J1S8 452 aa23.72■■□□□ 1.39
TSEN54-209ENST00000583454 KLK3P07288 261 aaPredicted RBP23.72■■□□□ 1.39
TSEN54-209ENST00000583454 SNRPAP09012 282 aaKnown RBP23.72■■□□□ 1.39
TSEN54-209ENST00000583454 MLLT10P55197 1068 aa23.72■■□□□ 1.39
TSEN54-209ENST00000583454 VSX2P58304 361 aaPredicted RBP23.72■■□□□ 1.39
TSEN54-209ENST00000583454 RPS15P62841 145 aaKnown RBP23.72■■□□□ 1.39
TSEN54-209ENST00000583454 CSNK1G2P78368 415 aa23.72■■□□□ 1.39
TSEN54-209ENST00000583454 CHAF1BQ13112 559 aa23.72■■□□□ 1.39
TSEN54-209ENST00000583454 WASHC2DQ5SRD0 308 aa23.72■■□□□ 1.39
TSEN54-209ENST00000583454 LGSNQ5TDP6 509 aa23.72■■□□□ 1.39
TSEN54-209ENST00000583454 ZNF385CQ66K41 422 aaPredicted RBP23.72■■□□□ 1.39
TSEN54-209ENST00000583454 TCAIMQ8N3R3 496 aa23.72■■□□□ 1.39
TSEN54-209ENST00000583454 TEX19Q8NA77 164 aa23.72■■□□□ 1.39
TSEN54-209ENST00000583454 RHEBL1Q8TAI7 183 aa23.72■■□□□ 1.39
TSEN54-209ENST00000583454 OR2A5Q96R48 311 aa23.72■■□□□ 1.39
TSEN54-209ENST00000583454 ATOH8Q96SQ7 321 aa23.72■■□□□ 1.39
TSEN54-209ENST00000583454 SYNPO2LQ9H987 977 aa23.72■■□□□ 1.39
TSEN54-209ENST00000583454 NOL12Q9UGY1 213 aaKnown RBP eCLIP23.72■■□□□ 1.39
TSEN54-209ENST00000583454 RNF112Q9ULX5 631 aa23.72■■□□□ 1.39
TSEN54-209ENST00000583454 SRPK3Q9UPE1 567 aa23.72■■□□□ 1.39
TSEN54-209ENST00000583454 V9GYY5 206 aaPredicted RBP23.72■■□□□ 1.39
TSEN54-209ENST00000583454 KCNE1BA0A087WTH5 132 aa23.71■■□□□ 1.39
TSEN54-209ENST00000583454 H0YGG7 62 aa23.71■■□□□ 1.39
TSEN54-209ENST00000583454 HAT1O14929 419 aa23.71■■□□□ 1.39
TSEN54-209ENST00000583454 TAPBPO15533 448 aa23.71■■□□□ 1.39
TSEN54-209ENST00000583454 ARF3P61204 181 aaPredicted RBP23.71■■□□□ 1.39
TSEN54-209ENST00000583454 GRM7Q14831 915 aa23.71■■□□□ 1.39
TSEN54-209ENST00000583454 ERCC6LQ2NKX8 1250 aa23.71■■□□□ 1.39
TSEN54-209ENST00000583454 C18orf21Q32NC0 220 aaPredicted RBP23.71■■□□□ 1.39
TSEN54-209ENST00000583454 FAM69BQ5VUD6 431 aa23.71■■□□□ 1.39
TSEN54-209ENST00000583454 YOD1Q5VVQ6 348 aaPredicted RBP23.71■■□□□ 1.39
TSEN54-209ENST00000583454 SULT1C3Q6IMI6 304 aa23.71■■□□□ 1.39
TSEN54-209ENST00000583454 FAM198BQ6UWH4 519 aa23.71■■□□□ 1.39
TSEN54-209ENST00000583454 TIFABQ6ZNK6 161 aa23.71■■□□□ 1.39
TSEN54-209ENST00000583454 THOC6Q86W42 341 aaKnown RBP23.71■■□□□ 1.39
TSEN54-209ENST00000583454 CNPY4Q8N129 248 aa23.71■■□□□ 1.39
TSEN54-209ENST00000583454 PDPRQ8NCN5 879 aa23.71■■□□□ 1.39
TSEN54-209ENST00000583454 OR4K1Q8NGD4 311 aa23.71■■□□□ 1.39
TSEN54-209ENST00000583454 DPH2Q9BQC3 489 aaPredicted RBP23.71■■□□□ 1.39
TSEN54-209ENST00000583454 CCDC77Q9BR77 488 aa23.71■■□□□ 1.39
TSEN54-209ENST00000583454 NDC1Q9BTX1 674 aa23.71■■□□□ 1.39
TSEN54-209ENST00000583454 SLC7A5P2Q9GIP4 190 aa23.71■■□□□ 1.39
TSEN54-209ENST00000583454 VPS11Q9H270 941 aa23.71■■□□□ 1.39
TSEN54-209ENST00000583454 IRAK4Q9NWZ3 460 aa23.71■■□□□ 1.39
TSEN54-209ENST00000583454 PTBP2Q9UKA9 531 aaKnown RBP23.71■■□□□ 1.39
TSEN54-209ENST00000583454 SLC22A14Q9Y267 594 aa23.71■■□□□ 1.39
TSEN54-209ENST00000583454 NCF1BA6NI72 391 aaPredicted RBP23.7■■□□□ 1.38
TSEN54-209ENST00000583454 NCF1CA8MVU1 366 aaPredicted RBP23.7■■□□□ 1.38
TSEN54-209ENST00000583454 KERAO60938 352 aa23.7■■□□□ 1.38
TSEN54-209ENST00000583454 CDH1P12830 882 aa23.7■■□□□ 1.38
TSEN54-209ENST00000583454 NCF1P14598 390 aaPredicted RBP23.7■■□□□ 1.38
TSEN54-209ENST00000583454 ARSFP54793 590 aa23.7■■□□□ 1.38
TSEN54-209ENST00000583454 ACAP2Q15057 778 aa23.7■■□□□ 1.38
TSEN54-209ENST00000583454 PRTGQ2VWP7 1150 aa23.7■■□□□ 1.38
TSEN54-209ENST00000583454 ADCK2Q7Z695 626 aa23.7■■□□□ 1.38
TSEN54-209ENST00000583454 ENDOVQ8N8Q3 282 aaKnown RBP23.7■■□□□ 1.38
TSEN54-209ENST00000583454 PROKR1Q8TCW9 393 aa23.7■■□□□ 1.38
TSEN54-209ENST00000583454 UBLCP1Q8WVY7 318 aaPredicted RBP23.7■■□□□ 1.38
TSEN54-209ENST00000583454 MTBPQ96DY7 904 aa23.7■■□□□ 1.38
TSEN54-209ENST00000583454 GBP5Q96PP8 586 aa23.7■■□□□ 1.38
TSEN54-209ENST00000583454 CD274Q9NZQ7 290 aa23.7■■□□□ 1.38
TSEN54-209ENST00000583454 IPO13O94829 963 aaKnown RBP23.69■■□□□ 1.38
TSEN54-209ENST00000583454 RAB40ALP0C0E4 278 aa23.69■■□□□ 1.38
TSEN54-209ENST00000583454 COL6A2P12110 1019 aa23.69■■□□□ 1.38
TSEN54-209ENST00000583454 CCR8P51685 355 aa23.69■■□□□ 1.38
TSEN54-209ENST00000583454 PLD3Q8IV08 490 aa23.69■■□□□ 1.38
TSEN54-209ENST00000583454 PLD6Q8N2A8 252 aaKnown RBP23.69■■□□□ 1.38
TSEN54-209ENST00000583454 AENQ8WTP8 325 aaKnown RBP23.69■■□□□ 1.38
TSEN54-209ENST00000583454 SLC5A11Q8WWX8 675 aa23.69■■□□□ 1.38
TSEN54-209ENST00000583454 NEIL2Q969S2 332 aa23.69■■□□□ 1.38
TSEN54-209ENST00000583454 TMEM79Q9BSE2 394 aa23.69■■□□□ 1.38
TSEN54-209ENST00000583454 CNOT10Q9H9A5 744 aaKnown RBP23.69■■□□□ 1.38
TSEN54-209ENST00000583454 NUDT4Q9NZJ9 180 aa23.69■■□□□ 1.38
TSEN54-209ENST00000583454 PCDHGA9Q9Y5G4 932 aaKnown RBP23.69■■□□□ 1.38
TSEN54-209ENST00000583454 KCNE2Q9Y6J6 123 aa23.69■■□□□ 1.38
TSEN54-209ENST00000583454 ARGFXA6NJG6 315 aa23.68■■□□□ 1.38
TSEN54-209ENST00000583454 CEACAM4O75871 244 aa23.68■■□□□ 1.38
TSEN54-209ENST00000583454 MTHFD2P13995 350 aa23.68■■□□□ 1.38
TSEN54-209ENST00000583454 GDF5P43026 501 aa23.68■■□□□ 1.38
TSEN54-209ENST00000583454 EMP3P54852 163 aa23.68■■□□□ 1.38
TSEN54-209ENST00000583454 RPS15AP62244 130 aaKnown RBP23.68■■□□□ 1.38
TSEN54-209ENST00000583454 FAM214AQ32MH5 1076 aa23.68■■□□□ 1.38
TSEN54-209ENST00000583454 TTC29Q8NA56 475 aaPredicted RBP23.68■■□□□ 1.38
TSEN54-209ENST00000583454 THAP11Q96EK4 314 aa23.68■■□□□ 1.38
TSEN54-209ENST00000583454 SARGQ9BW04 601 aa23.68■■□□□ 1.38
TSEN54-209ENST00000583454 NLNQ9BYT8 704 aa23.68■■□□□ 1.38
TSEN54-209ENST00000583454 ING2Q9H160 280 aa23.68■■□□□ 1.38
TSEN54-209ENST00000583454 CUTCQ9NTM9 273 aa23.68■■□□□ 1.38
TSEN54-209ENST00000583454 TXLNGQ9NUQ3 528 aa23.68■■□□□ 1.38
TSEN54-209ENST00000583454 WWOXQ9NZC7 414 aa23.68■■□□□ 1.38
TSEN54-209ENST00000583454 PSMC3IPQ9P2W1 217 aaPredicted RBP23.68■■□□□ 1.38
TSEN54-209ENST00000583454 DHCR7Q9UBM7 475 aaKnown RBP23.68■■□□□ 1.38
TSEN54-209ENST00000583454 TCFL5Q9UL49 500 aa23.68■■□□□ 1.38
TSEN54-209ENST00000583454 DYRK1BQ9Y463 629 aa23.68■■□□□ 1.38
TSEN54-209ENST00000583454 ICE1Q9Y2F5 2266 aa23.67■■□□□ 1.38
TSEN54-209ENST00000583454 ONECUT2O95948 504 aa23.67■■□□□ 1.38
TSEN54-209ENST00000583454 SHBGP04278 402 aa23.67■■□□□ 1.38
TSEN54-209ENST00000583454 EIF2S1P05198 315 aaKnown RBP23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms