RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 SPATA6LQ8N4H0 392 aa12.97□□□□□ -0.33
CSNK1D-220ENST00000581737 ZNF781Q8N8C0 355 aa12.97□□□□□ -0.33
CSNK1D-220ENST00000581737 WDR36Q8NI36 951 aaKnown RBP12.97□□□□□ -0.33
CSNK1D-220ENST00000581737 KCNE4Q8WWG9 221 aa12.97□□□□□ -0.33
CSNK1D-220ENST00000581737 FBXL8Q96CD0 374 aa12.97□□□□□ -0.33
CSNK1D-220ENST00000581737 NSL1Q96IY1 281 aa12.97□□□□□ -0.33
CSNK1D-220ENST00000581737 TMEM237Q96Q45 408 aa12.97□□□□□ -0.33
CSNK1D-220ENST00000581737 ATOH8Q96SQ7 321 aa12.97□□□□□ -0.33
CSNK1D-220ENST00000581737 EGFL8Q99944 293 aa12.97□□□□□ -0.33
CSNK1D-220ENST00000581737 ZNF768Q9H5H4 540 aaKnown RBP12.97□□□□□ -0.33
CSNK1D-220ENST00000581737 KCNK13Q9HB14 408 aa12.97□□□□□ -0.33
CSNK1D-220ENST00000581737 SPHK1Q9NYA1 384 aa12.97□□□□□ -0.33
CSNK1D-220ENST00000581737 UTP6Q9NYH9 597 aaKnown RBP12.97□□□□□ -0.33
CSNK1D-220ENST00000581737 SEMA5BQ9P283 1151 aa12.97□□□□□ -0.33
CSNK1D-220ENST00000581737 SSUH2Q9Y2M2 353 aa12.97□□□□□ -0.33
CSNK1D-220ENST00000581737 PCDHB11Q9Y5F2 797 aa12.97□□□□□ -0.33
CSNK1D-220ENST00000581737 CAPN7Q9Y6W3 813 aa12.97□□□□□ -0.33
CSNK1D-220ENST00000581737 SNRNP200O75643 2136 aaKnown RBP12.97□□□□□ -0.33
CSNK1D-220ENST00000581737 SLC28A2O43868 658 aa12.96□□□□□ -0.33
CSNK1D-220ENST00000581737 VPS4BO75351 444 aa12.96□□□□□ -0.33
CSNK1D-220ENST00000581737 DXOO77932 396 aaKnown RBP12.96□□□□□ -0.33
CSNK1D-220ENST00000581737 WISP1O95388 367 aa12.96□□□□□ -0.33
CSNK1D-220ENST00000581737 ZBTB11O95625 1053 aaPredicted RBP12.96□□□□□ -0.33
CSNK1D-220ENST00000581737 GUCA1CO95843 209 aa12.96□□□□□ -0.33
CSNK1D-220ENST00000581737 MPSTP25325 297 aa12.96□□□□□ -0.33
CSNK1D-220ENST00000581737 CMPK1P30085 196 aa12.96□□□□□ -0.33
CSNK1D-220ENST00000581737 GMPRP36959 345 aa12.96□□□□□ -0.33
CSNK1D-220ENST00000581737 MLLT3P42568 568 aaPredicted RBP12.96□□□□□ -0.33
CSNK1D-220ENST00000581737 PPP1CAP62136 330 aa12.96□□□□□ -0.33
CSNK1D-220ENST00000581737 LCP2Q13094 533 aa12.96□□□□□ -0.33
CSNK1D-220ENST00000581737 TSTA3Q13630 321 aaPredicted RBP12.96□□□□□ -0.33
CSNK1D-220ENST00000581737 TGFBIQ15582 683 aa12.96□□□□□ -0.33
CSNK1D-220ENST00000581737 SF1Q15637 639 aaKnown RBP12.96□□□□□ -0.33
CSNK1D-220ENST00000581737 KIF26BQ2KJY2 2108 aa12.96□□□□□ -0.33
CSNK1D-220ENST00000581737 TMTC4Q5T4D3 741 aa12.96□□□□□ -0.33
CSNK1D-220ENST00000581737 THEMIS2Q5TEJ8 643 aa12.96□□□□□ -0.33
CSNK1D-220ENST00000581737 CAPN13Q6MZZ7 669 aaPredicted RBP12.96□□□□□ -0.33
CSNK1D-220ENST00000581737 EPGNQ6UW88 154 aa12.96□□□□□ -0.33
CSNK1D-220ENST00000581737 RAB11FIP2Q7L804 512 aa12.96□□□□□ -0.33
CSNK1D-220ENST00000581737 CUZD1Q86UP6 607 aa12.96□□□□□ -0.33
CSNK1D-220ENST00000581737 LMNTD1Q8N9Z9 388 aa12.96□□□□□ -0.33
CSNK1D-220ENST00000581737 SNRNP27Q8WVK2 155 aaKnown RBP12.96□□□□□ -0.33
CSNK1D-220ENST00000581737 KLHL6Q8WZ60 621 aa12.96□□□□□ -0.33
CSNK1D-220ENST00000581737 PTERQ96BW5 349 aa12.96□□□□□ -0.33
CSNK1D-220ENST00000581737 PHF21BQ96EK2 531 aa12.96□□□□□ -0.33
CSNK1D-220ENST00000581737 OR2A14Q96R47 310 aa12.96□□□□□ -0.33
CSNK1D-220ENST00000581737 MAP3K3Q99759 626 aa12.96□□□□□ -0.33
CSNK1D-220ENST00000581737 CCT7Q99832 543 aa12.96□□□□□ -0.33
CSNK1D-220ENST00000581737 C1QTNF3Q9BXJ4 246 aa12.96□□□□□ -0.33
CSNK1D-220ENST00000581737 UNKQ9C0B0 810 aaKnown RBP12.96□□□□□ -0.33
CSNK1D-220ENST00000581737 LRMDAQ9H2I8 198 aa12.96□□□□□ -0.33
CSNK1D-220ENST00000581737 PNPOQ9NVS9 261 aa12.96□□□□□ -0.33
CSNK1D-220ENST00000581737 SOHLH2Q9NX45 425 aa12.96□□□□□ -0.33
CSNK1D-220ENST00000581737 IKZF3Q9UKT9 509 aa12.96□□□□□ -0.33
CSNK1D-220ENST00000581737 LOXL2Q9Y4K0 774 aa12.96□□□□□ -0.33
CSNK1D-220ENST00000581737 SPENQ96T58 3664 aaKnown RBP12.95□□□□□ -0.34
CSNK1D-220ENST00000581737 NBPF19A0A087WUL8 3843 aa12.95□□□□□ -0.34
CSNK1D-220ENST00000581737 KRT87PA6NCN2 255 aa12.95□□□□□ -0.34
CSNK1D-220ENST00000581737 A8MU76 341 aa12.95□□□□□ -0.34
CSNK1D-220ENST00000581737 E7ENX8 843 aa12.95□□□□□ -0.34
CSNK1D-220ENST00000581737 UBXN8O00124 270 aa12.95□□□□□ -0.34
CSNK1D-220ENST00000581737 PLD2O14939 933 aa12.95□□□□□ -0.34
CSNK1D-220ENST00000581737 KIF1CO43896 1103 aaKnown RBP12.95□□□□□ -0.34
CSNK1D-220ENST00000581737 KLK8O60259 260 aa12.95□□□□□ -0.34
CSNK1D-220ENST00000581737 JMJD7P0C870 316 aa12.95□□□□□ -0.34
CSNK1D-220ENST00000581737 NELFEP18615 380 aaKnown RBP12.95□□□□□ -0.34
CSNK1D-220ENST00000581737 PTPN4P29074 926 aa12.95□□□□□ -0.34
CSNK1D-220ENST00000581737 PRDX6P30041 224 aa12.95□□□□□ -0.34
CSNK1D-220ENST00000581737 PEBP1P30086 187 aaKnown RBP12.95□□□□□ -0.34
CSNK1D-220ENST00000581737 LSSP48449 732 aa12.95□□□□□ -0.34
CSNK1D-220ENST00000581737 IDH3AP50213 366 aa12.95□□□□□ -0.34
CSNK1D-220ENST00000581737 NCALDP61601 193 aa12.95□□□□□ -0.34
CSNK1D-220ENST00000581737 TBPL1P62380 186 aa12.95□□□□□ -0.34
CSNK1D-220ENST00000581737 HSD11B2P80365 405 aa12.95□□□□□ -0.34
CSNK1D-220ENST00000581737 ABATP80404 500 aa12.95□□□□□ -0.34
CSNK1D-220ENST00000581737 TAP2Q03519 686 aa12.95□□□□□ -0.34
CSNK1D-220ENST00000581737 C16orf72Q14CZ0 275 aa12.95□□□□□ -0.34
CSNK1D-220ENST00000581737 MAPRE2Q15555 327 aa12.95□□□□□ -0.34
CSNK1D-220ENST00000581737 OR4D1Q15615 310 aa12.95□□□□□ -0.34
CSNK1D-220ENST00000581737 PFKFB4Q16877 469 aa12.95□□□□□ -0.34
CSNK1D-220ENST00000581737 DNAL1Q4LDG9 190 aa12.95□□□□□ -0.34
CSNK1D-220ENST00000581737 PRAMEF13Q5VWM6 474 aa12.95□□□□□ -0.34
CSNK1D-220ENST00000581737 SULT1C3Q6IMI6 304 aa12.95□□□□□ -0.34
CSNK1D-220ENST00000581737 MBOAT1Q6ZNC8 495 aa12.95□□□□□ -0.34
CSNK1D-220ENST00000581737 CLYBLQ8N0X4 340 aa12.95□□□□□ -0.34
CSNK1D-220ENST00000581737 C2orf73Q8N5S3 287 aaPredicted RBP12.95□□□□□ -0.34
CSNK1D-220ENST00000581737 PDPRQ8NCN5 879 aa12.95□□□□□ -0.34
CSNK1D-220ENST00000581737 RCBTB1Q8NDN9 531 aa12.95□□□□□ -0.34
CSNK1D-220ENST00000581737 CEP70Q8NHQ1 597 aa12.95□□□□□ -0.34
CSNK1D-220ENST00000581737 CMTM5Q96DZ9 223 aa12.95□□□□□ -0.34
CSNK1D-220ENST00000581737 MED8Q96G25 268 aa12.95□□□□□ -0.34
CSNK1D-220ENST00000581737 SLC41A2Q96JW4 573 aa12.95□□□□□ -0.34
CSNK1D-220ENST00000581737 MAGEB10Q96LZ2 347 aaPredicted RBP12.95□□□□□ -0.34
CSNK1D-220ENST00000581737 NRTNQ99748 197 aa12.95□□□□□ -0.34
CSNK1D-220ENST00000581737 HAUS8Q9BT25 410 aa12.95□□□□□ -0.34
CSNK1D-220ENST00000581737 TRIM4Q9C037 500 aa12.95□□□□□ -0.34
CSNK1D-220ENST00000581737 C20orf27Q9GZN8 174 aa12.95□□□□□ -0.34
CSNK1D-220ENST00000581737 RASSF4Q9H2L5 321 aa12.95□□□□□ -0.34
CSNK1D-220ENST00000581737 WWOXQ9NZC7 414 aa12.95□□□□□ -0.34
CSNK1D-220ENST00000581737 ANKMY1Q9P2S6 941 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms