RNA–Protein interactions for RNA: ENST00000579743.2

GGA3-208, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-208ENST00000579743 CORO1CQ9ULV4 474 aaPredicted RBP13□□□□□ -0.33
GGA3-208ENST00000579743 CNTRLQ7Z7A1 2325 aa13□□□□□ -0.33
GGA3-208ENST00000579743 FFAR3O14843 346 aa12.99□□□□□ -0.33
GGA3-208ENST00000579743 GPR42O15529 346 aa12.99□□□□□ -0.33
GGA3-208ENST00000579743 LRRTM2O43300 516 aa12.99□□□□□ -0.33
GGA3-208ENST00000579743 FOXS1O43638 330 aa12.99□□□□□ -0.33
GGA3-208ENST00000579743 JRKO75564 520 aa12.99□□□□□ -0.33
GGA3-208ENST00000579743 SOX11P35716 441 aa12.99□□□□□ -0.33
GGA3-208ENST00000579743 TNFSF10P50591 281 aa12.99□□□□□ -0.33
GGA3-208ENST00000579743 AP1S2P56377 157 aa12.99□□□□□ -0.33
GGA3-208ENST00000579743 MPP1Q00013 466 aa12.99□□□□□ -0.33
GGA3-208ENST00000579743 ZNF33BQ06732 778 aa12.99□□□□□ -0.33
GGA3-208ENST00000579743 ACTN3Q08043 901 aaPredicted RBP12.99□□□□□ -0.33
GGA3-208ENST00000579743 NAE1Q13564 534 aa12.99□□□□□ -0.33
GGA3-208ENST00000579743 CRYMQ14894 314 aa12.99□□□□□ -0.33
GGA3-208ENST00000579743 HERC3Q15034 1050 aa12.99□□□□□ -0.33
GGA3-208ENST00000579743 AGTRAPQ6RW13 159 aa12.99□□□□□ -0.33
GGA3-208ENST00000579743 TMEM205Q6UW68 189 aa12.99□□□□□ -0.33
GGA3-208ENST00000579743 LCTLQ6UWM7 567 aa12.99□□□□□ -0.33
GGA3-208ENST00000579743 CPEB2Q7Z5Q1 589 aaKnown RBP12.99□□□□□ -0.33
GGA3-208ENST00000579743 ASPGQ86U10 573 aa12.99□□□□□ -0.33
GGA3-208ENST00000579743 PLD3Q8IV08 490 aa12.99□□□□□ -0.33
GGA3-208ENST00000579743 ZC3H7AQ8IWR0 971 aaKnown RBP12.99□□□□□ -0.33
GGA3-208ENST00000579743 LRRC56Q8IYG6 542 aaPredicted RBP12.99□□□□□ -0.33
GGA3-208ENST00000579743 SLC34A3Q8N130 599 aa12.99□□□□□ -0.33
GGA3-208ENST00000579743 GPATCH11Q8N954 259 aa12.99□□□□□ -0.33
GGA3-208ENST00000579743 CATSPER1Q8NEC5 780 aa12.99□□□□□ -0.33
GGA3-208ENST00000579743 OR51Q1Q8NH59 317 aa12.99□□□□□ -0.33
GGA3-208ENST00000579743 DNAJB8Q8NHS0 232 aa12.99□□□□□ -0.33
GGA3-208ENST00000579743 SLC13A3Q8WWT9 602 aa12.99□□□□□ -0.33
GGA3-208ENST00000579743 ZNF354BQ96LW1 612 aa12.99□□□□□ -0.33
GGA3-208ENST00000579743 RUNDC3BQ96NL0 473 aa12.99□□□□□ -0.33
GGA3-208ENST00000579743 ARL15Q9NXU5 204 aa12.99□□□□□ -0.33
GGA3-208ENST00000579743 PDE10AQ9Y233 779 aa12.99□□□□□ -0.33
GGA3-208ENST00000579743 MED16Q9Y2X0 877 aa12.99□□□□□ -0.33
GGA3-208ENST00000579743 HEATR5BQ9P2D3 2071 aa12.98□□□□□ -0.33
GGA3-208ENST00000579743 URADA6NGE7 173 aa12.98□□□□□ -0.33
GGA3-208ENST00000579743 DNALI1O14645 258 aaPredicted RBP12.98□□□□□ -0.33
GGA3-208ENST00000579743 RASAL1O95294 804 aa12.98□□□□□ -0.33
GGA3-208ENST00000579743 TCP1P17987 556 aaKnown RBP12.98□□□□□ -0.33
GGA3-208ENST00000579743 BCL6P41182 706 aa12.98□□□□□ -0.33
GGA3-208ENST00000579743 XCR1P46094 333 aa12.98□□□□□ -0.33
GGA3-208ENST00000579743 CCR8P51685 355 aa12.98□□□□□ -0.33
GGA3-208ENST00000579743 CASP6P55212 293 aa12.98□□□□□ -0.33
GGA3-208ENST00000579743 MAT1AQ00266 395 aaKnown RBP12.98□□□□□ -0.33
GGA3-208ENST00000579743 RBPJQ06330 500 aa12.98□□□□□ -0.33
GGA3-208ENST00000579743 PCOLCEQ15113 449 aa12.98□□□□□ -0.33
GGA3-208ENST00000579743 EXT1Q16394 746 aa12.98□□□□□ -0.33
GGA3-208ENST00000579743 SYT16Q17RD7 645 aa12.98□□□□□ -0.33
GGA3-208ENST00000579743 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.98□□□□□ -0.33
GGA3-208ENST00000579743 BTBD16Q32M84 506 aa12.98□□□□□ -0.33
GGA3-208ENST00000579743 RNASEH2BQ5TBB1 312 aaKnown RBP12.98□□□□□ -0.33
GGA3-208ENST00000579743 DUPD1Q68J44 220 aa12.98□□□□□ -0.33
GGA3-208ENST00000579743 MTFR2Q6P444 385 aa12.98□□□□□ -0.33
GGA3-208ENST00000579743 SYDE1Q6ZW31 735 aaPredicted RBP12.98□□□□□ -0.33
GGA3-208ENST00000579743 GALNT7Q86SF2 657 aa12.98□□□□□ -0.33
GGA3-208ENST00000579743 HORMAD2Q8N7B1 307 aa12.98□□□□□ -0.33
GGA3-208ENST00000579743 PSMF1Q92530 271 aa12.98□□□□□ -0.33
GGA3-208ENST00000579743 LINGO1Q96FE5 620 aa12.98□□□□□ -0.33
GGA3-208ENST00000579743 CYTH2Q99418 400 aa12.98□□□□□ -0.33
GGA3-208ENST00000579743 NDNQ99608 321 aa12.98□□□□□ -0.33
GGA3-208ENST00000579743 SLX1AQ9BQ83 275 aa12.98□□□□□ -0.33
GGA3-208ENST00000579743 ATG10Q9H0Y0 220 aa12.98□□□□□ -0.33
GGA3-208ENST00000579743 PLA2G3Q9NZ20 509 aa12.98□□□□□ -0.33
GGA3-208ENST00000579743 SUCOQ9UBS9 1254 aaKnown RBP12.98□□□□□ -0.33
GGA3-208ENST00000579743 NEU2Q9Y3R4 380 aa12.98□□□□□ -0.33
GGA3-208ENST00000579743 SLC22A7Q9Y694 548 aa12.98□□□□□ -0.33
GGA3-208ENST00000579743 MDC1Q14676 2089 aaKnown RBP12.98□□□□□ -0.33
GGA3-208ENST00000579743 HIVEP3Q5T1R4 2406 aa12.98□□□□□ -0.33
GGA3-208ENST00000579743 RELNP78509 3460 aa12.97□□□□□ -0.33
GGA3-208ENST00000579743 OR5H15A6NDH6 313 aa12.97□□□□□ -0.33
GGA3-208ENST00000579743 A8MUI8 341 aa12.97□□□□□ -0.33
GGA3-208ENST00000579743 NDC80O14777 642 aa12.97□□□□□ -0.33
GGA3-208ENST00000579743 P2RX6O15547 441 aa12.97□□□□□ -0.33
GGA3-208ENST00000579743 ENO2P09104 434 aaPredicted RBP12.97□□□□□ -0.33
GGA3-208ENST00000579743 IL1RNP18510 177 aa12.97□□□□□ -0.33
GGA3-208ENST00000579743 JAK1P23458 1154 aa12.97□□□□□ -0.33
GGA3-208ENST00000579743 TAS2R50P59544 299 aa12.97□□□□□ -0.33
GGA3-208ENST00000579743 CSNK1G2P78368 415 aa12.97□□□□□ -0.33
GGA3-208ENST00000579743 RGS1Q08116 209 aa12.97□□□□□ -0.33
GGA3-208ENST00000579743 DHX9Q08211 1270 aaKnown RBP12.97□□□□□ -0.33
GGA3-208ENST00000579743 ILF2Q12905 390 aaKnown RBP12.97□□□□□ -0.33
GGA3-208ENST00000579743 KCTD19Q17RG1 926 aaPredicted RBP12.97□□□□□ -0.33
GGA3-208ENST00000579743 BBS9Q3SYG4 887 aa12.97□□□□□ -0.33
GGA3-208ENST00000579743 PLAG1Q6DJT9 500 aa12.97□□□□□ -0.33
GGA3-208ENST00000579743 HIST2H2BCQ6DN03 193 aa12.97□□□□□ -0.33
GGA3-208ENST00000579743 TMEM214Q6NUQ4 689 aaKnown RBP12.97□□□□□ -0.33
GGA3-208ENST00000579743 HIBCHQ6NVY1 386 aaPredicted RBP12.97□□□□□ -0.33
GGA3-208ENST00000579743 PAQR3Q6TCH7 311 aa12.97□□□□□ -0.33
GGA3-208ENST00000579743 TMEM207Q6UWW9 146 aa12.97□□□□□ -0.33
GGA3-208ENST00000579743 GFRALQ6UXV0 394 aa12.97□□□□□ -0.33
GGA3-208ENST00000579743 SLC35F6Q8N357 371 aa12.97□□□□□ -0.33
GGA3-208ENST00000579743 ARHGEF39Q8N4T4 335 aa12.97□□□□□ -0.33
GGA3-208ENST00000579743 NR4A3Q92570 626 aa12.97□□□□□ -0.33
GGA3-208ENST00000579743 LRRC39Q96DD0 335 aa12.97□□□□□ -0.33
GGA3-208ENST00000579743 CERS2Q96G23 380 aa12.97□□□□□ -0.33
GGA3-208ENST00000579743 OR1F2PQ96R84 312 aa12.97□□□□□ -0.33
GGA3-208ENST00000579743 VN1R1Q9GZP7 353 aa12.97□□□□□ -0.33
GGA3-208ENST00000579743 HCN3Q9P1Z3 774 aa12.97□□□□□ -0.33
GGA3-208ENST00000579743 SNX12Q9UMY4 172 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms