RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 DNAJB5O75953 348 aa6.24□□□□□ -1.41
TRAF4-213ENST00000578917 KRT38O76015 456 aa6.24□□□□□ -1.41
TRAF4-213ENST00000578917 ALPPP05187 535 aa6.24□□□□□ -1.41
TRAF4-213ENST00000578917 HEXBP07686 556 aa6.24□□□□□ -1.41
TRAF4-213ENST00000578917 LTA4HP09960 611 aaKnown RBP6.24□□□□□ -1.41
TRAF4-213ENST00000578917 ZGLP1P0C6A0 271 aa6.24□□□□□ -1.41
TRAF4-213ENST00000578917 TFEBP19484 476 aa6.24□□□□□ -1.41
TRAF4-213ENST00000578917 HNF4AP41235 474 aa6.24□□□□□ -1.41
TRAF4-213ENST00000578917 GDF5P43026 501 aa6.24□□□□□ -1.41
TRAF4-213ENST00000578917 EMP2P54851 167 aa6.24□□□□□ -1.41
TRAF4-213ENST00000578917 EMP3P54852 163 aa6.24□□□□□ -1.41
TRAF4-213ENST00000578917 FOXL2P58012 376 aa6.24□□□□□ -1.41
TRAF4-213ENST00000578917 SKP1P63208 163 aa6.24□□□□□ -1.41
TRAF4-213ENST00000578917 CDKL1Q00532 357 aa6.24□□□□□ -1.41
TRAF4-213ENST00000578917 RGS1Q08116 209 aa6.24□□□□□ -1.41
TRAF4-213ENST00000578917 RAPSNQ13702 412 aa6.24□□□□□ -1.41
TRAF4-213ENST00000578917 BMPR2Q13873 1038 aa6.24□□□□□ -1.41
TRAF4-213ENST00000578917 EFTUD2Q15029 972 aaKnown RBP eCLIP6.24□□□□□ -1.412e-16■■■■■ 45.6
TRAF4-213ENST00000578917 TGFBIQ15582 683 aa6.24□□□□□ -1.41
TRAF4-213ENST00000578917 NKG7Q16617 165 aa6.24□□□□□ -1.41
TRAF4-213ENST00000578917 HIST2H2ACQ16777 129 aaPredicted RBP6.24□□□□□ -1.41
TRAF4-213ENST00000578917 PRTGQ2VWP7 1150 aa6.24□□□□□ -1.41
TRAF4-213ENST00000578917 MINDY4Q4G0A6 757 aa6.24□□□□□ -1.41
TRAF4-213ENST00000578917 LACTB2Q53H82 288 aaPredicted RBP6.24□□□□□ -1.41
TRAF4-213ENST00000578917 CATSPEREQ5SY80 951 aa6.24□□□□□ -1.41
TRAF4-213ENST00000578917 HIST2H2AA3Q6FI13 130 aa6.24□□□□□ -1.41
TRAF4-213ENST00000578917 SULT1C3Q6IMI6 304 aa6.24□□□□□ -1.41
TRAF4-213ENST00000578917 ZNF425Q6IV72 752 aa6.24□□□□□ -1.41
TRAF4-213ENST00000578917 NXPE4Q6UWF7 544 aa6.24□□□□□ -1.41
TRAF4-213ENST00000578917 FAM198BQ6UWH4 519 aa6.24□□□□□ -1.41
TRAF4-213ENST00000578917 SBSNQ6UWP8 590 aa6.24□□□□□ -1.41
TRAF4-213ENST00000578917 ATG14Q6ZNE5 492 aa6.24□□□□□ -1.41
TRAF4-213ENST00000578917 CCDC91Q7Z6B0 441 aa6.24□□□□□ -1.41
TRAF4-213ENST00000578917 CMC1Q7Z7K0 106 aa6.24□□□□□ -1.41
TRAF4-213ENST00000578917 MRGPREQ86SM8 312 aa6.24□□□□□ -1.41
TRAF4-213ENST00000578917 ASPGQ86U10 573 aa6.24□□□□□ -1.41
TRAF4-213ENST00000578917 KRT78Q8N1N4 520 aa6.24□□□□□ -1.41
TRAF4-213ENST00000578917 MFSD9Q8NBP5 474 aa6.24□□□□□ -1.41
TRAF4-213ENST00000578917 OR9A4Q8NGU2 314 aa6.24□□□□□ -1.41
TRAF4-213ENST00000578917 ZCCHC10Q8TBK6 192 aa6.24□□□□□ -1.41
TRAF4-213ENST00000578917 STT3BQ8TCJ2 826 aa6.24□□□□□ -1.41
TRAF4-213ENST00000578917 METTL21AQ8WXB1 218 aa6.24□□□□□ -1.41
TRAF4-213ENST00000578917 CCT6BQ92526 530 aa6.24□□□□□ -1.41
TRAF4-213ENST00000578917 NEIL2Q969S2 332 aa6.24□□□□□ -1.41
TRAF4-213ENST00000578917 KIAA1191Q96A73 305 aa6.24□□□□□ -1.41
TRAF4-213ENST00000578917 FKBP10Q96AY3 582 aa6.24□□□□□ -1.41
TRAF4-213ENST00000578917 MVB12AQ96EY5 273 aa6.24□□□□□ -1.41
TRAF4-213ENST00000578917 FAR2Q96K12 515 aa6.24□□□□□ -1.41
TRAF4-213ENST00000578917 ZNF285Q96NJ3 590 aa6.24□□□□□ -1.41
TRAF4-213ENST00000578917 CRB3Q9BUF7 120 aa6.24□□□□□ -1.41
TRAF4-213ENST00000578917 VPS11Q9H270 941 aa6.24□□□□□ -1.41
TRAF4-213ENST00000578917 ALG9Q9H6U8 611 aa6.24□□□□□ -1.41
TRAF4-213ENST00000578917 MKKSQ9NPJ1 570 aaPredicted RBP6.24□□□□□ -1.41
TRAF4-213ENST00000578917 DNAJC11Q9NVH1 559 aa6.24□□□□□ -1.41
TRAF4-213ENST00000578917 P4HTMQ9NXG6 502 aa6.24□□□□□ -1.41
TRAF4-213ENST00000578917 NINJ2Q9NZG7 142 aa6.24□□□□□ -1.41
TRAF4-213ENST00000578917 CTSFQ9UBX1 484 aa6.24□□□□□ -1.41
TRAF4-213ENST00000578917 C3orf18Q9UK00 162 aa6.24□□□□□ -1.41
TRAF4-213ENST00000578917 IKZF3Q9UKT9 509 aa6.24□□□□□ -1.41
TRAF4-213ENST00000578917 MKL2Q9ULH7 1088 aa6.24□□□□□ -1.41
TRAF4-213ENST00000578917 PIKFYVEQ9Y2I7 2098 aa6.24□□□□□ -1.41
TRAF4-213ENST00000578917 FLNBO75369 2602 aaKnown RBP6.24□□□□□ -1.41
TRAF4-213ENST00000578917 A0A096LPK6 155 aa6.23□□□□□ -1.41
TRAF4-213ENST00000578917 EXOC1LA0A1B0GW35 172 aa6.23□□□□□ -1.41
TRAF4-213ENST00000578917 TRBC2A0A5B9 178 aa6.23□□□□□ -1.41
TRAF4-213ENST00000578917 URADA6NGE7 173 aa6.23□□□□□ -1.41
TRAF4-213ENST00000578917 ANKDD1BA6NHY2 528 aa6.23□□□□□ -1.41
TRAF4-213ENST00000578917 SYCE1LA8MT33 242 aa6.23□□□□□ -1.41
TRAF4-213ENST00000578917 SGK494L7N484 410 aa6.23□□□□□ -1.41
TRAF4-213ENST00000578917 AGPSO00116 658 aa6.23□□□□□ -1.41
TRAF4-213ENST00000578917 FFAR3O14843 346 aa6.23□□□□□ -1.41
TRAF4-213ENST00000578917 GPR42O15529 346 aa6.23□□□□□ -1.41
TRAF4-213ENST00000578917 LCMT2O60294 686 aaKnown RBP6.23□□□□□ -1.41
TRAF4-213ENST00000578917 IPO13O94829 963 aaKnown RBP6.23□□□□□ -1.41
TRAF4-213ENST00000578917 C1GALT1C1LP0DN25 315 aa6.23□□□□□ -1.41
TRAF4-213ENST00000578917 GFAPP14136 432 aa6.23□□□□□ -1.41
TRAF4-213ENST00000578917 ACPPP15309 386 aa6.23□□□□□ -1.41
TRAF4-213ENST00000578917 CD1DP15813 335 aa6.23□□□□□ -1.41
TRAF4-213ENST00000578917 MMP11P24347 488 aa6.23□□□□□ -1.41
TRAF4-213ENST00000578917 ITGA3P26006 1051 aa6.23□□□□□ -1.41
TRAF4-213ENST00000578917 ARL1P40616 181 aaPredicted RBP6.23□□□□□ -1.41
TRAF4-213ENST00000578917 SLC26A3P40879 764 aa6.23□□□□□ -1.41
TRAF4-213ENST00000578917 BCL6P41182 706 aa6.23□□□□□ -1.41
TRAF4-213ENST00000578917 GLRBP48167 497 aa6.23□□□□□ -1.41
TRAF4-213ENST00000578917 HSPA7P48741 367 aa6.23□□□□□ -1.41
TRAF4-213ENST00000578917 SERPINB8P50452 374 aa6.23□□□□□ -1.41
TRAF4-213ENST00000578917 SERPINB9P50453 376 aa6.23□□□□□ -1.41
TRAF4-213ENST00000578917 KLC1Q07866 573 aa6.23□□□□□ -1.41
TRAF4-213ENST00000578917 DSG2Q14126 1118 aa6.23□□□□□ -1.41
TRAF4-213ENST00000578917 FAM53BQ14153 422 aa6.23□□□□□ -1.41
TRAF4-213ENST00000578917 HERC3Q15034 1050 aa6.23□□□□□ -1.41
TRAF4-213ENST00000578917 ACAP2Q15057 778 aa6.23□□□□□ -1.41
TRAF4-213ENST00000578917 OR4D1Q15615 310 aa6.23□□□□□ -1.41
TRAF4-213ENST00000578917 PDK4Q16654 411 aa6.23□□□□□ -1.41
TRAF4-213ENST00000578917 PPP1R3AQ16821 1122 aa6.23□□□□□ -1.41
TRAF4-213ENST00000578917 C18orf21Q32NC0 220 aaPredicted RBP6.23□□□□□ -1.41
TRAF4-213ENST00000578917 FBXO48Q5FWF7 155 aa6.23□□□□□ -1.41
TRAF4-213ENST00000578917 VWA2Q5GFL6 755 aa6.23□□□□□ -1.41
TRAF4-213ENST00000578917 XKR6Q5GH73 641 aa6.23□□□□□ -1.41
TRAF4-213ENST00000578917 PAGE2BQ5JRK9 111 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms