RNA–Protein interactions for RNA: ENST00000578733.5

CDK5RAP3-210, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-210ENST00000578733 OR7A17O14581 309 aa10.8□□□□□ -0.68
CDK5RAP3-210ENST00000578733 HAT1O14929 419 aa10.8□□□□□ -0.68
CDK5RAP3-210ENST00000578733 WFS1O76024 890 aa10.8□□□□□ -0.68
CDK5RAP3-210ENST00000578733 KRT6AP02538 564 aa10.8□□□□□ -0.68
CDK5RAP3-210ENST00000578733 KRT6BP04259 564 aa10.8□□□□□ -0.68
CDK5RAP3-210ENST00000578733 VARSP26640 1264 aaKnown RBP10.8□□□□□ -0.68
CDK5RAP3-210ENST00000578733 AHRP35869 848 aa10.8□□□□□ -0.68
CDK5RAP3-210ENST00000578733 TSPAN7P41732 249 aa10.8□□□□□ -0.68
CDK5RAP3-210ENST00000578733 KRT6CP48668 564 aa10.8□□□□□ -0.68
CDK5RAP3-210ENST00000578733 ATP1A2P50993 1020 aa10.8□□□□□ -0.68
CDK5RAP3-210ENST00000578733 PDX1P52945 283 aa10.8□□□□□ -0.68
CDK5RAP3-210ENST00000578733 WDR4P57081 412 aaKnown RBP10.8□□□□□ -0.68
CDK5RAP3-210ENST00000578733 ABCE1P61221 599 aaKnown RBP10.8□□□□□ -0.68
CDK5RAP3-210ENST00000578733 FOXM1Q08050 763 aa10.8□□□□□ -0.68
CDK5RAP3-210ENST00000578733 RGS1Q08116 209 aa10.8□□□□□ -0.68
CDK5RAP3-210ENST00000578733 IFT88Q13099 833 aa10.8□□□□□ -0.68
CDK5RAP3-210ENST00000578733 TARDBPQ13148 414 aaKnown RBP eCLIP10.8□□□□□ -0.68
CDK5RAP3-210ENST00000578733 TUBB3Q13509 450 aa10.8□□□□□ -0.68
CDK5RAP3-210ENST00000578733 E2F2Q14209 437 aa10.8□□□□□ -0.68
CDK5RAP3-210ENST00000578733 IL11RAQ14626 422 aa10.8□□□□□ -0.68
CDK5RAP3-210ENST00000578733 CEACAM20Q6UY09 585 aa10.8□□□□□ -0.68
CDK5RAP3-210ENST00000578733 ZCCHC23Q6ZST2 131 aa10.8□□□□□ -0.68
CDK5RAP3-210ENST00000578733 CUZD1Q86UP6 607 aa10.8□□□□□ -0.68
CDK5RAP3-210ENST00000578733 FAM20CQ8IXL6 584 aa10.8□□□□□ -0.68
CDK5RAP3-210ENST00000578733 L3MBTL4Q8NA19 623 aa10.8□□□□□ -0.68
CDK5RAP3-210ENST00000578733 MFSD9Q8NBP5 474 aa10.8□□□□□ -0.68
CDK5RAP3-210ENST00000578733 CAMKVQ8NCB2 501 aa10.8□□□□□ -0.68
CDK5RAP3-210ENST00000578733 TRPV3Q8NET8 790 aa10.8□□□□□ -0.68
CDK5RAP3-210ENST00000578733 OR4F6Q8NGB9 312 aa10.8□□□□□ -0.68
CDK5RAP3-210ENST00000578733 OR52B6Q8NGF0 335 aa10.8□□□□□ -0.68
CDK5RAP3-210ENST00000578733 MDM1Q8TC05 714 aa10.8□□□□□ -0.68
CDK5RAP3-210ENST00000578733 AGAP11Q8TF27 550 aa10.8□□□□□ -0.68
CDK5RAP3-210ENST00000578733 GATA6Q92908 595 aa10.8□□□□□ -0.68
CDK5RAP3-210ENST00000578733 PPM1MQ96MI6 270 aa10.8□□□□□ -0.68
CDK5RAP3-210ENST00000578733 NSUN5Q96P11 429 aaKnown RBP10.8□□□□□ -0.68
CDK5RAP3-210ENST00000578733 TEFMQ96QE5 360 aaKnown RBP10.8□□□□□ -0.68
CDK5RAP3-210ENST00000578733 CENPKQ9BS16 269 aa10.8□□□□□ -0.68
CDK5RAP3-210ENST00000578733 ZPBPQ9BS86 351 aa10.8□□□□□ -0.68
CDK5RAP3-210ENST00000578733 SARGQ9BW04 601 aa10.8□□□□□ -0.68
CDK5RAP3-210ENST00000578733 SLC7A5P2Q9GIP4 190 aa10.8□□□□□ -0.68
CDK5RAP3-210ENST00000578733 ZBTB26Q9HCK0 441 aa10.8□□□□□ -0.68
CDK5RAP3-210ENST00000578733 FGF21Q9NSA1 209 aa10.8□□□□□ -0.68
CDK5RAP3-210ENST00000578733 THAP1Q9NVV9 213 aa10.8□□□□□ -0.68
CDK5RAP3-210ENST00000578733 GEMIN8Q9NWZ8 242 aaKnown RBP10.8□□□□□ -0.68
CDK5RAP3-210ENST00000578733 RARRES3Q9UL19 164 aa10.8□□□□□ -0.68
CDK5RAP3-210ENST00000578733 LHX6Q9UPM6 363 aa10.8□□□□□ -0.68
CDK5RAP3-210ENST00000578733 SH2B3Q9UQQ2 575 aa10.8□□□□□ -0.68
CDK5RAP3-210ENST00000578733 KLHL20Q9Y2M5 609 aa10.8□□□□□ -0.68
CDK5RAP3-210ENST00000578733 SCN3AQ9NY46 2000 aa10.8□□□□□ -0.68
CDK5RAP3-210ENST00000578733 IGKV1-8A0A0C4DH67 115 aa10.79□□□□□ -0.68
CDK5RAP3-210ENST00000578733 FEZF1A0PJY2 475 aa10.79□□□□□ -0.68
CDK5RAP3-210ENST00000578733 TMEM150CB9EJG8 249 aa10.79□□□□□ -0.68
CDK5RAP3-210ENST00000578733 H0YIV9 168 aa10.79□□□□□ -0.68
CDK5RAP3-210ENST00000578733 KLF11O14901 512 aa10.79□□□□□ -0.68
CDK5RAP3-210ENST00000578733 PLD2O14939 933 aa10.79□□□□□ -0.68
CDK5RAP3-210ENST00000578733 AZIN1O14977 448 aa10.79□□□□□ -0.68
CDK5RAP3-210ENST00000578733 POLR1CO15160 346 aaPredicted RBP10.79□□□□□ -0.68
CDK5RAP3-210ENST00000578733 CASC3O15234 703 aaKnown RBP10.79□□□□□ -0.68
CDK5RAP3-210ENST00000578733 OR4F21O95013 312 aa10.79□□□□□ -0.68
CDK5RAP3-210ENST00000578733 HBQ1P09105 142 aa10.79□□□□□ -0.68
CDK5RAP3-210ENST00000578733 UROSP10746 265 aa10.79□□□□□ -0.68
CDK5RAP3-210ENST00000578733 PCNAP12004 261 aa10.79□□□□□ -0.68
CDK5RAP3-210ENST00000578733 TSPAN8P19075 237 aa10.79□□□□□ -0.68
CDK5RAP3-210ENST00000578733 EPORP19235 508 aa10.79□□□□□ -0.68
CDK5RAP3-210ENST00000578733 SCTRP47872 440 aa10.79□□□□□ -0.68
CDK5RAP3-210ENST00000578733 SLC1A6P48664 564 aa10.79□□□□□ -0.68
CDK5RAP3-210ENST00000578733 ITGA1P56199 1179 aa10.79□□□□□ -0.68
CDK5RAP3-210ENST00000578733 SKP1P63208 163 aa10.79□□□□□ -0.68
CDK5RAP3-210ENST00000578733 ZNF33BQ06732 778 aa10.79□□□□□ -0.68
CDK5RAP3-210ENST00000578733 CYP4F3Q08477 520 aa10.79□□□□□ -0.68
CDK5RAP3-210ENST00000578733 TRAF3Q13114 568 aa10.79□□□□□ -0.68
CDK5RAP3-210ENST00000578733 C16orf72Q14CZ0 275 aa10.79□□□□□ -0.68
CDK5RAP3-210ENST00000578733 CPSF6Q16630 551 aaKnown RBP eCLIP10.79□□□□□ -0.68
CDK5RAP3-210ENST00000578733 NDUFA9Q16795 377 aa10.79□□□□□ -0.68
CDK5RAP3-210ENST00000578733 MANEAQ5SRI9 462 aa10.79□□□□□ -0.68
CDK5RAP3-210ENST00000578733 NIPAL1Q6NVV3 410 aa10.79□□□□□ -0.68
CDK5RAP3-210ENST00000578733 TLDC1Q6P9B6 456 aa10.79□□□□□ -0.68
CDK5RAP3-210ENST00000578733 ASPGQ86U10 573 aa10.79□□□□□ -0.68
CDK5RAP3-210ENST00000578733 PPP1R3BQ86XI6 285 aa10.79□□□□□ -0.68
CDK5RAP3-210ENST00000578733 MCATQ8IVS2 390 aaKnown RBP10.79□□□□□ -0.68
CDK5RAP3-210ENST00000578733 DNAJC22Q8N4W6 341 aa10.79□□□□□ -0.68
CDK5RAP3-210ENST00000578733 METTL6Q8TCB7 284 aa10.79□□□□□ -0.68
CDK5RAP3-210ENST00000578733 CCT6BQ92526 530 aa10.79□□□□□ -0.68
CDK5RAP3-210ENST00000578733 FAR2Q96K12 515 aa10.79□□□□□ -0.68
CDK5RAP3-210ENST00000578733 MAGEB18Q96M61 343 aa10.79□□□□□ -0.68
CDK5RAP3-210ENST00000578733 OR6C1Q96RD1 312 aa10.79□□□□□ -0.68
CDK5RAP3-210ENST00000578733 ASPSCR1Q9BZE9 553 aa10.79□□□□□ -0.68
CDK5RAP3-210ENST00000578733 ILKAPQ9H0C8 392 aaPredicted RBP10.79□□□□□ -0.68
CDK5RAP3-210ENST00000578733 FBXO8Q9NRD0 319 aa10.79□□□□□ -0.68
CDK5RAP3-210ENST00000578733 NMRK1Q9NWW6 199 aa10.79□□□□□ -0.68
CDK5RAP3-210ENST00000578733 ZFP69BQ9UJL9 534 aa10.79□□□□□ -0.68
CDK5RAP3-210ENST00000578733 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.79□□□□□ -0.68
CDK5RAP3-210ENST00000578733 RNF11Q9Y3C5 154 aa10.79□□□□□ -0.68
CDK5RAP3-210ENST00000578733 PCDHGA4Q9Y5G9 962 aa10.79□□□□□ -0.68
CDK5RAP3-210ENST00000578733 AP1M2Q9Y6Q5 423 aa10.79□□□□□ -0.68
CDK5RAP3-210ENST00000578733 WDFY3Q8IZQ1 3526 aa10.79□□□□□ -0.68
CDK5RAP3-210ENST00000578733 NBEAQ8NFP9 2946 aa10.78□□□□□ -0.68
CDK5RAP3-210ENST00000578733 A0A088AWK7 358 aa10.78□□□□□ -0.68
CDK5RAP3-210ENST00000578733 ZSCAN9O15535 394 aaPredicted RBP10.78□□□□□ -0.68
CDK5RAP3-210ENST00000578733 NDUFS4O43181 175 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms