RNA–Protein interactions for RNA: ENST00000578329.1

PPP4R1-209, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 3

Gene PPP4R1, Length 350 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-209	ENST00000578329	PCYOX1	Q9UHG3	505 aa		4.2	□□□□□ -1.74
PPP4R1-209	ENST00000578329	GNPTG	Q9UJJ9	305 aa		4.2	□□□□□ -1.74
PPP4R1-209	ENST00000578329	FBXO5	Q9UKT4	447 aa		4.2	□□□□□ -1.74
PPP4R1-209	ENST00000578329	ZNF835	Q9Y2P0	537 aa		4.2	□□□□□ -1.74
PPP4R1-209	ENST00000578329	ASB1	Q9Y576	335 aa		4.2	□□□□□ -1.74
PPP4R1-209	ENST00000578329	FAM169A	Q9Y6X4	670 aa		4.2	□□□□□ -1.74
PPP4R1-209	ENST00000578329	EML6	Q6ZMW3	1958 aa		4.2	□□□□□ -1.74
PPP4R1-209	ENST00000578329	ZNF469	Q96JG9	3925 aa	Predicted RBP	4.19	□□□□□ -1.74
PPP4R1-209	ENST00000578329	ACAN	P16112	2415 aa		4.19	□□□□□ -1.74
PPP4R1-209	ENST00000578329	NSG1	A0A0A6YYJ2	146 aa		4.19	□□□□□ -1.74
PPP4R1-209	ENST00000578329	PINLYP	A6NC86	204 aa		4.19	□□□□□ -1.74
PPP4R1-209	ENST00000578329	ASPDH	A6ND91	283 aa		4.19	□□□□□ -1.74
PPP4R1-209	ENST00000578329	ZNF860	A6NHJ4	632 aa		4.19	□□□□□ -1.74
PPP4R1-209	ENST00000578329	USP27X	A6NNY8	438 aa		4.19	□□□□□ -1.74
PPP4R1-209	ENST00000578329		E7EVH7	732 aa		4.19	□□□□□ -1.74
PPP4R1-209	ENST00000578329	FAM227A	F5H4B4	570 aa		4.19	□□□□□ -1.74
PPP4R1-209	ENST00000578329	PRKN	O60260	465 aa	Predicted RBP	4.19	□□□□□ -1.74
PPP4R1-209	ENST00000578329	CEP104	O60308	925 aa		4.19	□□□□□ -1.74
PPP4R1-209	ENST00000578329	RDH16	O75452	317 aa		4.19	□□□□□ -1.74
PPP4R1-209	ENST00000578329	ZNF189	O75820	626 aa	Predicted RBP	4.19	□□□□□ -1.74
PPP4R1-209	ENST00000578329	SEC24D	O94855	1032 aa	Predicted RBP	4.19	□□□□□ -1.74
PPP4R1-209	ENST00000578329	NSA2	O95478	260 aa	Known RBP	4.19	□□□□□ -1.74
PPP4R1-209	ENST00000578329	KRT14	P02533	472 aa		4.19	□□□□□ -1.74
PPP4R1-209	ENST00000578329	MPC1L	P0DKB6	136 aa		4.19	□□□□□ -1.74
PPP4R1-209	ENST00000578329	ERVK-10	P10266	1014 aa		4.19	□□□□□ -1.74
PPP4R1-209	ENST00000578329	CDH1	P12830	882 aa		4.19	□□□□□ -1.74
PPP4R1-209	ENST00000578329	MLN	P12872	115 aa		4.19	□□□□□ -1.74
PPP4R1-209	ENST00000578329	EZR	P15311	586 aa	Known RBP	4.19	□□□□□ -1.74
PPP4R1-209	ENST00000578329	FBL	P22087	321 aa	Known RBP	4.19	□□□□□ -1.74
PPP4R1-209	ENST00000578329	TNFRSF8	P28908	595 aa		4.19	□□□□□ -1.74
PPP4R1-209	ENST00000578329	PPP2R1B	P30154	601 aa		4.19	□□□□□ -1.74
PPP4R1-209	ENST00000578329	CCNF	P41002	786 aa		4.19	□□□□□ -1.74
PPP4R1-209	ENST00000578329	KCNC1	P48547	511 aa		4.19	□□□□□ -1.74
PPP4R1-209	ENST00000578329	OLR1	P78380	273 aa		4.19	□□□□□ -1.74
PPP4R1-209	ENST00000578329	BTG2	P78543	158 aa		4.19	□□□□□ -1.74
PPP4R1-209	ENST00000578329	CDK16	Q00536	496 aa		4.19	□□□□□ -1.74
PPP4R1-209	ENST00000578329	HSF1	Q00613	529 aa		4.19	□□□□□ -1.74
PPP4R1-209	ENST00000578329	DHX9	Q08211	1270 aa	Known RBP	4.19	□□□□□ -1.74
PPP4R1-209	ENST00000578329	CDC16	Q13042	620 aa		4.19	□□□□□ -1.74
PPP4R1-209	ENST00000578329	TUBA3C	Q13748	450 aa		4.19	□□□□□ -1.74
PPP4R1-209	ENST00000578329	DHX34	Q14147	1143 aa	Known RBP	4.19	□□□□□ -1.74
PPP4R1-209	ENST00000578329	FAM53B	Q14153	422 aa		4.19	□□□□□ -1.74
PPP4R1-209	ENST00000578329	FASTKD3	Q14CZ7	662 aa	Known RBP	4.19	□□□□□ -1.74
PPP4R1-209	ENST00000578329	TLR1	Q15399	786 aa		4.19	□□□□□ -1.74
PPP4R1-209	ENST00000578329	TESK1	Q15569	626 aa		4.19	□□□□□ -1.74
PPP4R1-209	ENST00000578329	C3AR1	Q16581	482 aa		4.19	□□□□□ -1.74
PPP4R1-209	ENST00000578329	MUM1	Q2TAK8	710 aa		4.19	□□□□□ -1.74
PPP4R1-209	ENST00000578329	FAM214A	Q32MH5	1076 aa		4.19	□□□□□ -1.74
PPP4R1-209	ENST00000578329	HSP90AA5P	Q58FG0	334 aa		4.19	□□□□□ -1.74
PPP4R1-209	ENST00000578329	EMC4	Q5J8M3	183 aa		4.19	□□□□□ -1.74
PPP4R1-209	ENST00000578329	AARS2	Q5JTZ9	985 aa	Known RBP	4.19	□□□□□ -1.74
PPP4R1-209	ENST00000578329	CATSPERE	Q5SY80	951 aa		4.19	□□□□□ -1.74
PPP4R1-209	ENST00000578329	UBAP2	Q5T6F2	1119 aa	Known RBP	4.19	□□□□□ -1.74
PPP4R1-209	ENST00000578329	SEL1L2	Q5TEA6	688 aa		4.19	□□□□□ -1.74
PPP4R1-209	ENST00000578329	SP5	Q6BEB4	398 aa	Predicted RBP	4.19	□□□□□ -1.74
PPP4R1-209	ENST00000578329	HIBCH	Q6NVY1	386 aa	Predicted RBP	4.19	□□□□□ -1.74
PPP4R1-209	ENST00000578329	TUBA3E	Q6PEY2	450 aa		4.19	□□□□□ -1.74
PPP4R1-209	ENST00000578329	C16orf47	Q6ZP98	133 aa	Predicted RBP	4.19	□□□□□ -1.74
PPP4R1-209	ENST00000578329	PCGF5	Q86SE9	256 aa		4.19	□□□□□ -1.74
PPP4R1-209	ENST00000578329	FJX1	Q86VR8	437 aa		4.19	□□□□□ -1.74
PPP4R1-209	ENST00000578329	CRLF3	Q8IUI8	442 aa		4.19	□□□□□ -1.74
PPP4R1-209	ENST00000578329	KBTBD2	Q8IY47	623 aa		4.19	□□□□□ -1.74
PPP4R1-209	ENST00000578329	SRRM1	Q8IYB3	904 aa	Known RBP	4.19	□□□□□ -1.74
PPP4R1-209	ENST00000578329	BEST3	Q8N1M1	668 aa		4.19	□□□□□ -1.74
PPP4R1-209	ENST00000578329	RPRML	Q8N4K4	120 aa		4.19	□□□□□ -1.74
PPP4R1-209	ENST00000578329	CCDC89	Q8N998	374 aa		4.19	□□□□□ -1.74
PPP4R1-209	ENST00000578329	ABHD11	Q8NFV4	315 aa		4.19	□□□□□ -1.74
PPP4R1-209	ENST00000578329	OR56A3	Q8NH54	315 aa		4.19	□□□□□ -1.74
PPP4R1-209	ENST00000578329	OR51Q1	Q8NH59	317 aa		4.19	□□□□□ -1.74
PPP4R1-209	ENST00000578329	CREB3L4	Q8TEY5	395 aa		4.19	□□□□□ -1.74
PPP4R1-209	ENST00000578329	ANKRD49	Q8WVL7	239 aa		4.19	□□□□□ -1.74
PPP4R1-209	ENST00000578329	SLC22A18	Q96BI1	424 aa		4.19	□□□□□ -1.74
PPP4R1-209	ENST00000578329	MIEF2	Q96C03	454 aa		4.19	□□□□□ -1.74
PPP4R1-209	ENST00000578329	PYCR2	Q96C36	320 aa		4.19	□□□□□ -1.74
PPP4R1-209	ENST00000578329	MVB12A	Q96EY5	273 aa		4.19	□□□□□ -1.74
PPP4R1-209	ENST00000578329	MMAB	Q96EY8	250 aa	Predicted RBP	4.19	□□□□□ -1.74
PPP4R1-209	ENST00000578329	SCMH1	Q96GD3	660 aa		4.19	□□□□□ -1.74
PPP4R1-209	ENST00000578329	CABS1	Q96KC9	395 aa		4.19	□□□□□ -1.74
PPP4R1-209	ENST00000578329	CNDP1	Q96KN2	507 aa		4.19	□□□□□ -1.74
PPP4R1-209	ENST00000578329	C5orf34	Q96MH7	638 aa		4.19	□□□□□ -1.74
PPP4R1-209	ENST00000578329	FRMD6	Q96NE9	622 aa		4.19	□□□□□ -1.74
PPP4R1-209	ENST00000578329	PANX3	Q96QZ0	392 aa		4.19	□□□□□ -1.74
PPP4R1-209	ENST00000578329	C17orf62	Q9BQA9	187 aa		4.19	□□□□□ -1.74
PPP4R1-209	ENST00000578329	RAB11FIP5	Q9BXF6	653 aa		4.19	□□□□□ -1.74
PPP4R1-209	ENST00000578329	RBCK1	Q9BYM8	510 aa		4.19	□□□□□ -1.74
PPP4R1-209	ENST00000578329	SLC7A5P2	Q9GIP4	190 aa		4.19	□□□□□ -1.74
PPP4R1-209	ENST00000578329	RNF32	Q9H0A6	362 aa		4.19	□□□□□ -1.74
PPP4R1-209	ENST00000578329	ATG10	Q9H0Y0	220 aa		4.19	□□□□□ -1.74
PPP4R1-209	ENST00000578329	MRPS30	Q9NP92	439 aa	Known RBP	4.19	□□□□□ -1.74
PPP4R1-209	ENST00000578329	NECTIN3	Q9NQS3	549 aa		4.19	□□□□□ -1.74
PPP4R1-209	ENST00000578329	ANKRD10	Q9NXR5	420 aa		4.19	□□□□□ -1.74
PPP4R1-209	ENST00000578329	BFAR	Q9NZS9	450 aa		4.19	□□□□□ -1.74
PPP4R1-209	ENST00000578329	HCN3	Q9P1Z3	774 aa		4.19	□□□□□ -1.74
PPP4R1-209	ENST00000578329	ABI3	Q9P2A4	366 aa		4.19	□□□□□ -1.74
PPP4R1-209	ENST00000578329	MAP10	Q9P2G4	905 aa		4.19	□□□□□ -1.74
PPP4R1-209	ENST00000578329	GPN3	Q9UHW5	284 aa	Predicted RBP	4.19	□□□□□ -1.74
PPP4R1-209	ENST00000578329	NXT1	Q9UKK6	140 aa	Known RBP	4.19	□□□□□ -1.74
PPP4R1-209	ENST00000578329	SLC39A10	Q9ULF5	831 aa		4.19	□□□□□ -1.74
PPP4R1-209	ENST00000578329	MKL2	Q9ULH7	1088 aa		4.19	□□□□□ -1.74
PPP4R1-209	ENST00000578329	ENTPD4	Q9Y227	616 aa		4.19	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms