RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 NCCRP1Q6ZVX7 275 aaPredicted RBP12.59□□□□□ -0.39
COPS3-214ENST00000577246 OTUD6BQ8N6M0 293 aa12.59□□□□□ -0.39
COPS3-214ENST00000577246 UBL4BQ8N7F7 174 aa12.59□□□□□ -0.39
COPS3-214ENST00000577246 OR9A4Q8NGU2 314 aa12.59□□□□□ -0.39
COPS3-214ENST00000577246 OR51Q1Q8NH59 317 aa12.59□□□□□ -0.39
COPS3-214ENST00000577246 SLC35B2Q8TB61 432 aa12.59□□□□□ -0.39
COPS3-214ENST00000577246 TMEM125Q96AQ2 219 aa12.59□□□□□ -0.39
COPS3-214ENST00000577246 ZNF778Q96MU6 729 aa12.59□□□□□ -0.39
COPS3-214ENST00000577246 MARCH4Q9P2E8 410 aaPredicted RBP12.59□□□□□ -0.39
COPS3-214ENST00000577246 KCNN3Q9UGI6 736 aa12.59□□□□□ -0.39
COPS3-214ENST00000577246 ITPR3Q14573 2671 aa12.59□□□□□ -0.39
COPS3-214ENST00000577246 USP27XA6NNY8 438 aa12.58□□□□□ -0.4
COPS3-214ENST00000577246 ADAM10O14672 748 aa12.58□□□□□ -0.4
COPS3-214ENST00000577246 NDC80O14777 642 aa12.58□□□□□ -0.4
COPS3-214ENST00000577246 TFECO14948 347 aaPredicted RBP12.58□□□□□ -0.4
COPS3-214ENST00000577246 NME2P1O60361 137 aa12.58□□□□□ -0.4
COPS3-214ENST00000577246 NEURL1O76050 574 aa12.58□□□□□ -0.4
COPS3-214ENST00000577246 NME2P22392 152 aa12.58□□□□□ -0.4
COPS3-214ENST00000577246 CYB561P49447 251 aa12.58□□□□□ -0.4
COPS3-214ENST00000577246 EFNA3P52797 238 aa12.58□□□□□ -0.4
COPS3-214ENST00000577246 PPP2R2AP63151 447 aa12.58□□□□□ -0.4
COPS3-214ENST00000577246 HSF1Q00613 529 aa12.58□□□□□ -0.4
COPS3-214ENST00000577246 NSDHLQ15738 373 aa12.58□□□□□ -0.4
COPS3-214ENST00000577246 PCID2Q5JVF3 399 aa12.58□□□□□ -0.4
COPS3-214ENST00000577246 THEMIS2Q5TEJ8 643 aa12.58□□□□□ -0.4
COPS3-214ENST00000577246 MRNIPQ6NTE8 343 aa12.58□□□□□ -0.4
COPS3-214ENST00000577246 AADACL2Q6P093 401 aa12.58□□□□□ -0.4
COPS3-214ENST00000577246 PAPD4Q6PIY7 484 aaKnown RBP12.58□□□□□ -0.4
COPS3-214ENST00000577246 SDCCAG8Q86SQ7 713 aaPredicted RBP12.58□□□□□ -0.4
COPS3-214ENST00000577246 FAM57AQ8TBR7 257 aa12.58□□□□□ -0.4
COPS3-214ENST00000577246 ALG3Q92685 438 aa12.58□□□□□ -0.4
COPS3-214ENST00000577246 NINJ1Q92982 152 aa12.58□□□□□ -0.4
COPS3-214ENST00000577246 THAP11Q96EK4 314 aa12.58□□□□□ -0.4
COPS3-214ENST00000577246 TMUB1Q9BVT8 246 aa12.58□□□□□ -0.4
COPS3-214ENST00000577246 FAM129AQ9BZQ8 928 aa12.58□□□□□ -0.4
COPS3-214ENST00000577246 ETNK1Q9HBU6 452 aa12.58□□□□□ -0.4
COPS3-214ENST00000577246 ANKHQ9HCJ1 492 aa12.58□□□□□ -0.4
COPS3-214ENST00000577246 KCNJ16Q9NPI9 418 aa12.58□□□□□ -0.4
COPS3-214ENST00000577246 R3HDM2Q9Y2K5 976 aaKnown RBP12.58□□□□□ -0.4
COPS3-214ENST00000577246 ASB1Q9Y576 335 aa12.58□□□□□ -0.4
COPS3-214ENST00000577246 ARHGEF33A8MVX0 844 aa12.57□□□□□ -0.4
COPS3-214ENST00000577246 SMAPO00193 183 aa12.57□□□□□ -0.4
COPS3-214ENST00000577246 AP3B1O00203 1094 aa12.57□□□□□ -0.4
COPS3-214ENST00000577246 HAT1O14929 419 aa12.57□□□□□ -0.4
COPS3-214ENST00000577246 P2RX6O15547 441 aa12.57□□□□□ -0.4
COPS3-214ENST00000577246 PSIP1O75475 530 aaKnown RBP12.57□□□□□ -0.4
COPS3-214ENST00000577246 ESR1P03372 595 aa12.57□□□□□ -0.4
COPS3-214ENST00000577246 TPOP07202 933 aa12.57□□□□□ -0.4
COPS3-214ENST00000577246 CHRM3P20309 590 aa12.57□□□□□ -0.4
COPS3-214ENST00000577246 BCL6P41182 706 aa12.57□□□□□ -0.4
COPS3-214ENST00000577246 RPS15AP62244 130 aaKnown RBP12.57□□□□□ -0.4
COPS3-214ENST00000577246 FOLH1Q04609 750 aa12.57□□□□□ -0.4
COPS3-214ENST00000577246 GBX1Q14549 363 aa12.57□□□□□ -0.4
COPS3-214ENST00000577246 ABRAXAS2Q15018 415 aa12.57□□□□□ -0.4
COPS3-214ENST00000577246 SFT2D3Q587I9 215 aa12.57□□□□□ -0.4
COPS3-214ENST00000577246 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.57□□□□□ -0.4
COPS3-214ENST00000577246 CD163Q86VB7 1156 aa12.57□□□□□ -0.4
COPS3-214ENST00000577246 DMRTC2Q8IXT2 367 aaPredicted RBP12.57□□□□□ -0.4
COPS3-214ENST00000577246 CLYBLQ8N0X4 340 aa12.57□□□□□ -0.4
COPS3-214ENST00000577246 LILRB4Q8NHJ6 448 aa12.57□□□□□ -0.4
COPS3-214ENST00000577246 RND1Q92730 232 aa12.57□□□□□ -0.4
COPS3-214ENST00000577246 OR1F2PQ96R84 312 aa12.57□□□□□ -0.4
COPS3-214ENST00000577246 FOXC2Q99958 501 aa12.57□□□□□ -0.4
COPS3-214ENST00000577246 TP63Q9H3D4 680 aaPredicted RBP12.57□□□□□ -0.4
COPS3-214ENST00000577246 HCN3Q9P1Z3 774 aa12.57□□□□□ -0.4
COPS3-214ENST00000577246 TSR3Q9UJK0 312 aaKnown RBP12.57□□□□□ -0.4
COPS3-214ENST00000577246 EDARQ9UNE0 448 aa12.57□□□□□ -0.4
COPS3-214ENST00000577246 TFR2Q9UP52 801 aa12.57□□□□□ -0.4
COPS3-214ENST00000577246 KLF13Q9Y2Y9 288 aaPredicted RBP12.57□□□□□ -0.4
COPS3-214ENST00000577246 KCNE1BA0A087WTH5 132 aa12.56□□□□□ -0.4
COPS3-214ENST00000577246 BTNL10A8MVZ5 291 aa12.56□□□□□ -0.4
COPS3-214ENST00000577246 MAGEB17A8MXT2 336 aa12.56□□□□□ -0.4
COPS3-214ENST00000577246 MIF4GDA9UHW6 222 aaKnown RBP12.56□□□□□ -0.4
COPS3-214ENST00000577246 E5RI56 91 aa12.56□□□□□ -0.4
COPS3-214ENST00000577246 KLRC4-KLRK1H3BQV0 150 aa12.56□□□□□ -0.4
COPS3-214ENST00000577246 FCHO1O14526 889 aa12.56□□□□□ -0.4
COPS3-214ENST00000577246 PRMT3O60678 531 aa12.56□□□□□ -0.4
COPS3-214ENST00000577246 ZWINTO95229 277 aa12.56□□□□□ -0.4
COPS3-214ENST00000577246 SLC16A8O95907 504 aa12.56□□□□□ -0.4
COPS3-214ENST00000577246 IFNB1P01574 187 aa12.56□□□□□ -0.4
COPS3-214ENST00000577246 APRTP07741 180 aa12.56□□□□□ -0.4
COPS3-214ENST00000577246 MSX1P28360 303 aa12.56□□□□□ -0.4
COPS3-214ENST00000577246 DNAJA1P31689 397 aaKnown RBP12.56□□□□□ -0.4
COPS3-214ENST00000577246 ADARP55265 1226 aaKnown RBP12.56□□□□□ -0.4
COPS3-214ENST00000577246 SKP1P63208 163 aa12.56□□□□□ -0.4
COPS3-214ENST00000577246 MYBPHQ13203 477 aa12.56□□□□□ -0.4
COPS3-214ENST00000577246 KLF1Q13351 362 aaPredicted RBP12.56□□□□□ -0.4
COPS3-214ENST00000577246 USP10Q14694 798 aaKnown RBP12.56□□□□□ -0.4
COPS3-214ENST00000577246 TTLL9Q3SXZ7 439 aa12.56□□□□□ -0.4
COPS3-214ENST00000577246 CEP128Q6ZU80 1094 aa12.56□□□□□ -0.4
COPS3-214ENST00000577246 RPS19BP1Q86WX3 136 aaKnown RBP12.56□□□□□ -0.4
COPS3-214ENST00000577246 CHERPQ8IWX8 916 aaKnown RBP12.56□□□□□ -0.4
COPS3-214ENST00000577246 CPSF7Q8N684 471 aaKnown RBP12.56□□□□□ -0.4
COPS3-214ENST00000577246 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.56□□□□□ -0.4
COPS3-214ENST00000577246 CAMKVQ8NCB2 501 aa12.56□□□□□ -0.4
COPS3-214ENST00000577246 FBXO15Q8NCQ5 510 aaPredicted RBP12.56□□□□□ -0.4
COPS3-214ENST00000577246 PLPP5Q8NEB5 264 aa12.56□□□□□ -0.4
COPS3-214ENST00000577246 MYRIPQ8NFW9 859 aa12.56□□□□□ -0.4
COPS3-214ENST00000577246 BIRC8Q96P09 236 aa12.56□□□□□ -0.4
COPS3-214ENST00000577246 TCF12Q99081 682 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms