RNA–Protein interactions for RNA: ENST00000577197.1

TSEN54-204, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 2

Gene TSEN54, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-204ENST00000577197 MINDY1Q8N5J2 469 aa11.95□□□□□ -0.5
TSEN54-204ENST00000577197 SRFBP1Q8NEF9 429 aaKnown RBP11.95□□□□□ -0.5
TSEN54-204ENST00000577197 OR4E2Q8NGC2 313 aa11.95□□□□□ -0.5
TSEN54-204ENST00000577197 TCEAL3Q969E4 200 aa11.95□□□□□ -0.5
TSEN54-204ENST00000577197 CATSPER2Q96P56 530 aa11.95□□□□□ -0.5
TSEN54-204ENST00000577197 CENPKQ9BS16 269 aa11.95□□□□□ -0.5
TSEN54-204ENST00000577197 RTKNQ9BST9 563 aa11.95□□□□□ -0.5
TSEN54-204ENST00000577197 GTPBP2Q9BX10 602 aaKnown RBP11.95□□□□□ -0.5
TSEN54-204ENST00000577197 FSCN3Q9NQT6 498 aa11.95□□□□□ -0.5
TSEN54-204ENST00000577197 ENAMQ9NRM1 1142 aa11.95□□□□□ -0.5
TSEN54-204ENST00000577197 AHSPQ9NZD4 102 aa11.95□□□□□ -0.5
TSEN54-204ENST00000577197 ARMCX1Q9P291 453 aa11.95□□□□□ -0.5
TSEN54-204ENST00000577197 CIDEBQ9UHD4 219 aa11.95□□□□□ -0.5
TSEN54-204ENST00000577197 ADAM29Q9UKF5 820 aa11.95□□□□□ -0.5
TSEN54-204ENST00000577197 POMT2Q9UKY4 750 aa11.95□□□□□ -0.5
TSEN54-204ENST00000577197 SH2B3Q9UQQ2 575 aa11.95□□□□□ -0.5
TSEN54-204ENST00000577197 PCDHGB2Q9Y5G2 931 aa11.95□□□□□ -0.5
TSEN54-204ENST00000577197 AP1M2Q9Y6Q5 423 aa11.95□□□□□ -0.5
TSEN54-204ENST00000577197 IGKV1-8A0A0C4DH67 115 aa11.94□□□□□ -0.5
TSEN54-204ENST00000577197 A0A0J9YY10 115 aa11.94□□□□□ -0.5
TSEN54-204ENST00000577197 ANKDD1BA6NHY2 528 aa11.94□□□□□ -0.5
TSEN54-204ENST00000577197 B4DGG1 531 aa11.94□□□□□ -0.5
TSEN54-204ENST00000577197 BTN3A3O00478 584 aa11.94□□□□□ -0.5
TSEN54-204ENST00000577197 ANKRD28O15084 1053 aa11.94□□□□□ -0.5
TSEN54-204ENST00000577197 PEX11AO75192 247 aa11.94□□□□□ -0.5
TSEN54-204ENST00000577197 SEC22BO75396 215 aa11.94□□□□□ -0.5
TSEN54-204ENST00000577197 DNAJC8O75937 253 aaPredicted RBP11.94□□□□□ -0.5
TSEN54-204ENST00000577197 MYO1DO94832 1006 aa11.94□□□□□ -0.5
TSEN54-204ENST00000577197 NPPAP01160 153 aa11.94□□□□□ -0.5
TSEN54-204ENST00000577197 COX4I1P13073 169 aa11.94□□□□□ -0.5
TSEN54-204ENST00000577197 GLB1P16278 677 aa11.94□□□□□ -0.5
TSEN54-204ENST00000577197 AMD1P17707 334 aa11.94□□□□□ -0.5
TSEN54-204ENST00000577197 TGM1P22735 817 aa11.94□□□□□ -0.5
TSEN54-204ENST00000577197 VARSP26640 1264 aaKnown RBP11.94□□□□□ -0.5
TSEN54-204ENST00000577197 CAPZBP47756 277 aa11.94□□□□□ -0.5
TSEN54-204ENST00000577197 HNRNPFP52597 415 aaKnown RBP11.94□□□□□ -0.5
TSEN54-204ENST00000577197 CLNS1AP54105 237 aaKnown RBP11.94□□□□□ -0.5
TSEN54-204ENST00000577197 GPLD1P80108 840 aa11.94□□□□□ -0.5
TSEN54-204ENST00000577197 ACSM2AQ08AH3 577 aa11.94□□□□□ -0.5
TSEN54-204ENST00000577197 SLC14A1Q13336 389 aa11.94□□□□□ -0.5
TSEN54-204ENST00000577197 SQSTM1Q13501 440 aa11.94□□□□□ -0.5
TSEN54-204ENST00000577197 C1orf61Q13536 156 aa11.94□□□□□ -0.5
TSEN54-204ENST00000577197 TSTA3Q13630 321 aaPredicted RBP11.94□□□□□ -0.5
TSEN54-204ENST00000577197 CYLC2Q14093 348 aaPredicted RBP11.94□□□□□ -0.5
TSEN54-204ENST00000577197 UBAP2LQ14157 1087 aaKnown RBP11.94□□□□□ -0.5
TSEN54-204ENST00000577197 RCAN2Q14206 197 aa11.94□□□□□ -0.5
TSEN54-204ENST00000577197 SUZ12Q15022 739 aaKnown RBP11.94□□□□□ -0.5
TSEN54-204ENST00000577197 RPS6KA2Q15349 733 aa11.94□□□□□ -0.5
TSEN54-204ENST00000577197 SF3A2Q15428 464 aaKnown RBP11.94□□□□□ -0.5
TSEN54-204ENST00000577197 SF1Q15637 639 aaKnown RBP11.94□□□□□ -0.5
TSEN54-204ENST00000577197 ADPRMQ3LIE5 342 aa11.94□□□□□ -0.5
TSEN54-204ENST00000577197 DNAL1Q4LDG9 190 aa11.94□□□□□ -0.5
TSEN54-204ENST00000577197 RFTN2Q52LD8 501 aaPredicted RBP11.94□□□□□ -0.5
TSEN54-204ENST00000577197 ACSM2BQ68CK6 577 aa11.94□□□□□ -0.5
TSEN54-204ENST00000577197 HACD2Q6Y1H2 254 aa11.94□□□□□ -0.5
TSEN54-204ENST00000577197 PRR23CQ6ZRP0 262 aa11.94□□□□□ -0.5
TSEN54-204ENST00000577197 MSANTD1Q6ZTZ1 278 aa11.94□□□□□ -0.5
TSEN54-204ENST00000577197 ASRGL1Q7L266 308 aa11.94□□□□□ -0.5
TSEN54-204ENST00000577197 PAQR7Q86WK9 346 aa11.94□□□□□ -0.5
TSEN54-204ENST00000577197 DNAJB8Q8NHS0 232 aa11.94□□□□□ -0.5
TSEN54-204ENST00000577197 SAP25Q8TEE9 199 aa11.94□□□□□ -0.5
TSEN54-204ENST00000577197 CHTF18Q8WVB6 975 aa11.94□□□□□ -0.5
TSEN54-204ENST00000577197 RSC1A1Q92681 617 aa11.94□□□□□ -0.5
TSEN54-204ENST00000577197 ZNF764Q96H86 408 aaPredicted RBP11.94□□□□□ -0.5
TSEN54-204ENST00000577197 PPP1R36Q96LQ0 422 aa11.94□□□□□ -0.5
TSEN54-204ENST00000577197 QRFPRQ96P65 431 aa11.94□□□□□ -0.5
TSEN54-204ENST00000577197 OR2A14Q96R47 310 aa11.94□□□□□ -0.5
TSEN54-204ENST00000577197 EDEM2Q9BV94 578 aa11.94□□□□□ -0.5
TSEN54-204ENST00000577197 MS4A8Q9BY19 250 aa11.94□□□□□ -0.5
TSEN54-204ENST00000577197 ABCG4Q9H172 646 aa11.94□□□□□ -0.5
TSEN54-204ENST00000577197 XKR8Q9H6D3 395 aa11.94□□□□□ -0.5
TSEN54-204ENST00000577197 IL21RQ9HBE5 538 aa11.94□□□□□ -0.5
TSEN54-204ENST00000577197 PARD6AQ9NPB6 346 aa11.94□□□□□ -0.5
TSEN54-204ENST00000577197 FARSBQ9NSD9 589 aaKnown RBP11.94□□□□□ -0.5
TSEN54-204ENST00000577197 ARL8BQ9NVJ2 186 aa11.94□□□□□ -0.5
TSEN54-204ENST00000577197 ACTR10Q9NZ32 417 aa11.94□□□□□ -0.5
TSEN54-204ENST00000577197 PTGDR2Q9Y5Y4 395 aa11.94□□□□□ -0.5
TSEN54-204ENST00000577197 GPR179Q6PRD1 2367 aa11.94□□□□□ -0.5
TSEN54-204ENST00000577197 TDRD6O60522 2096 aaKnown RBP11.94□□□□□ -0.5
TSEN54-204ENST00000577197 CABIN1Q9Y6J0 2220 aa11.94□□□□□ -0.5
TSEN54-204ENST00000577197 FAM234BA2RU67 622 aa11.93□□□□□ -0.5
TSEN54-204ENST00000577197 MAGEB17A8MXT2 336 aa11.93□□□□□ -0.5
TSEN54-204ENST00000577197 ISM1B1AKI9 464 aa11.93□□□□□ -0.5
TSEN54-204ENST00000577197 H7BY64 318 aa11.93□□□□□ -0.5
TSEN54-204ENST00000577197 SDC3O75056 442 aa11.93□□□□□ -0.5
TSEN54-204ENST00000577197 UBXN7O94888 489 aa11.93□□□□□ -0.5
TSEN54-204ENST00000577197 UGT2B7P16662 529 aa11.93□□□□□ -0.5
TSEN54-204ENST00000577197 DDX5P17844 614 aaKnown RBP11.93□□□□□ -0.5
TSEN54-204ENST00000577197 RPL3P39023 403 aaKnown RBP11.93□□□□□ -0.5
TSEN54-204ENST00000577197 GRIA3P42263 894 aa11.93□□□□□ -0.5
TSEN54-204ENST00000577197 HNRNPH2P55795 449 aaKnown RBP11.93□□□□□ -0.5
TSEN54-204ENST00000577197 CLDN8P56748 225 aa11.93□□□□□ -0.5
TSEN54-204ENST00000577197 NCALDP61601 193 aa11.93□□□□□ -0.5
TSEN54-204ENST00000577197 RPL38P63173 70 aaKnown RBP11.93□□□□□ -0.5
TSEN54-204ENST00000577197 LRRC74AQ0VAA2 488 aa11.93□□□□□ -0.5
TSEN54-204ENST00000577197 TBL3Q12788 808 aaKnown RBP11.93□□□□□ -0.5
TSEN54-204ENST00000577197 BNIP3Q12983 259 aa11.93□□□□□ -0.5
TSEN54-204ENST00000577197 PWP1Q13610 501 aa11.93□□□□□ -0.5
TSEN54-204ENST00000577197 INAVAQ3KP66 663 aa11.93□□□□□ -0.5
TSEN54-204ENST00000577197 SPATS1Q496A3 300 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms