RNA–Protein interactions for RNA: ENST00000576218.5

SMG6-220, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 902 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-220ENST00000576218 CD1DP15813 335 aa14.52□□□□□ -0.09
SMG6-220ENST00000576218 BCL6P41182 706 aa14.52□□□□□ -0.09
SMG6-220ENST00000576218 PGDP52209 483 aa14.52□□□□□ -0.09
SMG6-220ENST00000576218 DSG2Q14126 1118 aa14.52□□□□□ -0.09
SMG6-220ENST00000576218 RBBP5Q15291 538 aaKnown RBP14.52□□□□□ -0.09
SMG6-220ENST00000576218 TGFBIQ15582 683 aa14.52□□□□□ -0.09
SMG6-220ENST00000576218 ZKSCAN8Q15776 578 aaPredicted RBP14.52□□□□□ -0.09
SMG6-220ENST00000576218 IRAK1BP1Q5VVH5 260 aa14.52□□□□□ -0.09
SMG6-220ENST00000576218 ASB18Q6ZVZ8 466 aa14.52□□□□□ -0.09
SMG6-220ENST00000576218 COX15Q7KZN9 410 aa14.52□□□□□ -0.09
SMG6-220ENST00000576218 SNX31Q8N9S9 440 aa14.52□□□□□ -0.09
SMG6-220ENST00000576218 NEIL2Q969S2 332 aa14.52□□□□□ -0.09
SMG6-220ENST00000576218 AIF1LQ9BQI0 150 aa14.52□□□□□ -0.09
SMG6-220ENST00000576218 ACSS3Q9H6R3 686 aa14.52□□□□□ -0.09
SMG6-220ENST00000576218 NMRAL1Q9HBL8 299 aa14.52□□□□□ -0.09
SMG6-220ENST00000576218 ANKHQ9HCJ1 492 aa14.52□□□□□ -0.09
SMG6-220ENST00000576218 SLC22A11Q9NSA0 550 aa14.52□□□□□ -0.09
SMG6-220ENST00000576218 P4HTMQ9NXG6 502 aa14.52□□□□□ -0.09
SMG6-220ENST00000576218 NFU1Q9UMS0 254 aa14.52□□□□□ -0.09
SMG6-220ENST00000576218 ACOT9Q9Y305 439 aa14.52□□□□□ -0.09
SMG6-220ENST00000576218 KCNE1BA0A087WTH5 132 aa14.51□□□□□ -0.09
SMG6-220ENST00000576218 A0A087X1B8 175 aa14.51□□□□□ -0.09
SMG6-220ENST00000576218 TRBC2A0A5B9 178 aa14.51□□□□□ -0.09
SMG6-220ENST00000576218 FFAR3O14843 346 aa14.51□□□□□ -0.09
SMG6-220ENST00000576218 GPR42O15529 346 aa14.51□□□□□ -0.09
SMG6-220ENST00000576218 CNOT3O75175 753 aaKnown RBP14.51□□□□□ -0.09
SMG6-220ENST00000576218 H2AFYO75367 372 aaKnown RBP14.51□□□□□ -0.09
SMG6-220ENST00000576218 IPO13O94829 963 aaKnown RBP14.51□□□□□ -0.09
SMG6-220ENST00000576218 MED26O95402 600 aa14.51□□□□□ -0.09
SMG6-220ENST00000576218 UQCRHP07919 91 aa14.51□□□□□ -0.09
SMG6-220ENST00000576218 TFEBP19484 476 aa14.51□□□□□ -0.09
SMG6-220ENST00000576218 TYK2P29597 1187 aa14.51□□□□□ -0.09
SMG6-220ENST00000576218 SERPINB8P50452 374 aa14.51□□□□□ -0.09
SMG6-220ENST00000576218 SKP1P63208 163 aa14.51□□□□□ -0.09
SMG6-220ENST00000576218 RGS1Q08116 209 aa14.51□□□□□ -0.09
SMG6-220ENST00000576218 RAPSNQ13702 412 aa14.51□□□□□ -0.09
SMG6-220ENST00000576218 CATSPEREQ5SY80 951 aa14.51□□□□□ -0.09
SMG6-220ENST00000576218 SULT1C3Q6IMI6 304 aa14.51□□□□□ -0.09
SMG6-220ENST00000576218 TCTN3Q6NUS6 607 aa14.51□□□□□ -0.09
SMG6-220ENST00000576218 KLC3Q6P597 504 aa14.51□□□□□ -0.09
SMG6-220ENST00000576218 MFSD9Q8NBP5 474 aa14.51□□□□□ -0.09
SMG6-220ENST00000576218 UHMK1Q8TAS1 419 aaKnown RBP14.51□□□□□ -0.09
SMG6-220ENST00000576218 STAG3L4Q8TBR4 150 aa14.51□□□□□ -0.09
SMG6-220ENST00000576218 STT3BQ8TCJ2 826 aa14.51□□□□□ -0.09
SMG6-220ENST00000576218 OR4K3Q96R72 315 aa14.51□□□□□ -0.09
SMG6-220ENST00000576218 MACROD1Q9BQ69 325 aa14.51□□□□□ -0.09
SMG6-220ENST00000576218 SLC26A1Q9H2B4 701 aa14.51□□□□□ -0.09
SMG6-220ENST00000576218 ALG9Q9H6U8 611 aa14.51□□□□□ -0.09
SMG6-220ENST00000576218 PELI2Q9HAT8 420 aa14.51□□□□□ -0.09
SMG6-220ENST00000576218 ENAMQ9NRM1 1142 aa14.51□□□□□ -0.09
SMG6-220ENST00000576218 SEMA3GQ9NS98 782 aa14.51□□□□□ -0.09
SMG6-220ENST00000576218 C14orf105Q9NVL8 296 aa14.51□□□□□ -0.09
SMG6-220ENST00000576218 C3orf18Q9UK00 162 aa14.51□□□□□ -0.09
SMG6-220ENST00000576218 HEATR5BQ9P2D3 2071 aa14.51□□□□□ -0.09
SMG6-220ENST00000576218 FER1L5A0AVI2 2057 aa14.5□□□□□ -0.09
SMG6-220ENST00000576218 A0A087WUV0 522 aaPredicted RBP14.5□□□□□ -0.09
SMG6-220ENST00000576218 POC1B-GALNT4F8VUJ3 575 aa14.5□□□□□ -0.09
SMG6-220ENST00000576218 MAP2K7O14733 419 aa14.5□□□□□ -0.09
SMG6-220ENST00000576218 CLGNO14967 610 aa14.5□□□□□ -0.09
SMG6-220ENST00000576218 CCNT2O60583 730 aaKnown RBP14.5□□□□□ -0.09
SMG6-220ENST00000576218 HEXBP07686 556 aa14.5□□□□□ -0.09
SMG6-220ENST00000576218 UMODP07911 640 aa14.5□□□□□ -0.09
SMG6-220ENST00000576218 ZGLP1P0C6A0 271 aa14.5□□□□□ -0.09
SMG6-220ENST00000576218 SLC35E2BP0CK96 405 aa14.5□□□□□ -0.09
SMG6-220ENST00000576218 IL1RNP18510 177 aa14.5□□□□□ -0.09
SMG6-220ENST00000576218 GNAZP19086 355 aa14.5□□□□□ -0.09
SMG6-220ENST00000576218 NR1D1P20393 614 aa14.5□□□□□ -0.09
SMG6-220ENST00000576218 MMP11P24347 488 aa14.5□□□□□ -0.09
SMG6-220ENST00000576218 CXCR2P25025 360 aa14.5□□□□□ -0.09
SMG6-220ENST00000576218 ITGA3P26006 1051 aa14.5□□□□□ -0.09
SMG6-220ENST00000576218 GDF5P43026 501 aa14.5□□□□□ -0.09
SMG6-220ENST00000576218 MSH2P43246 934 aa14.5□□□□□ -0.09
SMG6-220ENST00000576218 KLC1Q07866 573 aa14.5□□□□□ -0.09
SMG6-220ENST00000576218 CDC16Q13042 620 aa14.5□□□□□ -0.09
SMG6-220ENST00000576218 FAM53BQ14153 422 aa14.5□□□□□ -0.09
SMG6-220ENST00000576218 FAM83EQ2M2I3 478 aa14.5□□□□□ -0.09
SMG6-220ENST00000576218 C18orf21Q32NC0 220 aaPredicted RBP14.5□□□□□ -0.09
SMG6-220ENST00000576218 NXPE4Q6UWF7 544 aa14.5□□□□□ -0.09
SMG6-220ENST00000576218 ATG14Q6ZNE5 492 aa14.5□□□□□ -0.09
SMG6-220ENST00000576218 VN1R4Q7Z5H5 301 aa14.5□□□□□ -0.09
SMG6-220ENST00000576218 PPP1R32Q7Z5V6 425 aa14.5□□□□□ -0.09
SMG6-220ENST00000576218 CCDC91Q7Z6B0 441 aa14.5□□□□□ -0.09
SMG6-220ENST00000576218 RELL1Q8IUW5 271 aa14.5□□□□□ -0.09
SMG6-220ENST00000576218 TEX19Q8NA77 164 aa14.5□□□□□ -0.09
SMG6-220ENST00000576218 ABHD11Q8NFV4 315 aa14.5□□□□□ -0.09
SMG6-220ENST00000576218 OR9A4Q8NGU2 314 aa14.5□□□□□ -0.09
SMG6-220ENST00000576218 CCT6BQ92526 530 aa14.5□□□□□ -0.09
SMG6-220ENST00000576218 KIAA1191Q96A73 305 aa14.5□□□□□ -0.09
SMG6-220ENST00000576218 RHBDF1Q96CC6 855 aa14.5□□□□□ -0.09
SMG6-220ENST00000576218 SPSB2Q99619 263 aa14.5□□□□□ -0.09
SMG6-220ENST00000576218 CAPS2Q9BXY5 557 aa14.5□□□□□ -0.09
SMG6-220ENST00000576218 VPS11Q9H270 941 aa14.5□□□□□ -0.09
SMG6-220ENST00000576218 SYNPO2LQ9H987 977 aa14.5□□□□□ -0.09
SMG6-220ENST00000576218 MKKSQ9NPJ1 570 aaPredicted RBP14.5□□□□□ -0.09
SMG6-220ENST00000576218 SNX15Q9NRS6 342 aa14.5□□□□□ -0.09
SMG6-220ENST00000576218 DNAJC11Q9NVH1 559 aa14.5□□□□□ -0.09
SMG6-220ENST00000576218 GPR83Q9NYM4 423 aa14.5□□□□□ -0.09
SMG6-220ENST00000576218 FBXL4Q9UKA2 621 aa14.5□□□□□ -0.09
SMG6-220ENST00000576218 MAP4K5Q9Y4K4 846 aa14.5□□□□□ -0.09
SMG6-220ENST00000576218 COL6A6A6NMZ7 2263 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms