RNA–Protein interactions for RNA: ENST00000575882.5

TOM1L1-221, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TOM1L1, Length 2,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-221ENST00000575882 MTERF1Q99551 399 aaKnown RBP16.64■□□□□ 0.25
TOM1L1-221ENST00000575882 TESMINQ9Y4I5 508 aa16.64■□□□□ 0.25
TOM1L1-221ENST00000575882 SAGE2PA6NJ88 616 aa16.63■□□□□ 0.25
TOM1L1-221ENST00000575882 TBKBP1A7MCY6 615 aa16.63■□□□□ 0.25
TOM1L1-221ENST00000575882 TAF4O00268 1085 aa16.63■□□□□ 0.25
TOM1L1-221ENST00000575882 CD22P20273 847 aa16.63■□□□□ 0.25
TOM1L1-221ENST00000575882 GGT2P36268 569 aa16.63■□□□□ 0.25
TOM1L1-221ENST00000575882 IRF8Q02556 426 aa16.63■□□□□ 0.25
TOM1L1-221ENST00000575882 TUBA3EQ6PEY2 450 aa16.63■□□□□ 0.25
TOM1L1-221ENST00000575882 USP43Q70EL4 1123 aa16.63■□□□□ 0.25
TOM1L1-221ENST00000575882 DNAJC22Q8N4W6 341 aa16.63■□□□□ 0.25
TOM1L1-221ENST00000575882 FEVQ99581 238 aa16.63■□□□□ 0.25
TOM1L1-221ENST00000575882 DUSP26Q9BV47 211 aa16.63■□□□□ 0.25
TOM1L1-221ENST00000575882 VPS29Q9UBQ0 182 aa16.63■□□□□ 0.25
TOM1L1-221ENST00000575882 ZNF821O75541 412 aaPredicted RBP16.63■□□□□ 0.25
TOM1L1-221ENST00000575882 DLGAP3O95886 979 aa16.63■□□□□ 0.25
TOM1L1-221ENST00000575882 CYP2A7P20853 494 aa16.63■□□□□ 0.25
TOM1L1-221ENST00000575882 CSNK1DP48730 415 aa16.63■□□□□ 0.25
TOM1L1-221ENST00000575882 PTPN5P54829 565 aa16.63■□□□□ 0.25
TOM1L1-221ENST00000575882 PFN3P60673 137 aa16.63■□□□□ 0.25
TOM1L1-221ENST00000575882 CSTF3Q12996 717 aaKnown RBP16.63■□□□□ 0.25
TOM1L1-221ENST00000575882 CARTPTQ16568 116 aa16.63■□□□□ 0.25
TOM1L1-221ENST00000575882 DGKKQ5KSL6 1271 aa16.63■□□□□ 0.25
TOM1L1-221ENST00000575882 CCDC103Q8IW40 242 aa16.63■□□□□ 0.25
TOM1L1-221ENST00000575882 ADAMTS19Q8TE59 1207 aa16.63■□□□□ 0.25
TOM1L1-221ENST00000575882 GGHQ92820 318 aa16.63■□□□□ 0.25
TOM1L1-221ENST00000575882 LYSMD1Q96S90 227 aa16.63■□□□□ 0.25
TOM1L1-221ENST00000575882 CHST8Q9H2A9 424 aa16.63■□□□□ 0.25
TOM1L1-221ENST00000575882 TMEM184CQ9NVA4 438 aa16.63■□□□□ 0.25
TOM1L1-221ENST00000575882 TNFRSF11BO00300 401 aa16.62■□□□□ 0.25
TOM1L1-221ENST00000575882 BNIP3LO60238 219 aa16.62■□□□□ 0.25
TOM1L1-221ENST00000575882 CDK1P06493 297 aa16.62■□□□□ 0.25
TOM1L1-221ENST00000575882 GRK5P34947 590 aa16.62■□□□□ 0.25
TOM1L1-221ENST00000575882 NUDT6P53370 316 aa16.62■□□□□ 0.25
TOM1L1-221ENST00000575882 ACSM2AQ08AH3 577 aa16.62■□□□□ 0.25
TOM1L1-221ENST00000575882 BCL2A1Q16548 175 aa16.62■□□□□ 0.25
TOM1L1-221ENST00000575882 ACSM2BQ68CK6 577 aa16.62■□□□□ 0.25
TOM1L1-221ENST00000575882 TPRG1Q6ZUI0 275 aa16.62■□□□□ 0.25
TOM1L1-221ENST00000575882 SLC46A3Q7Z3Q1 461 aa16.62■□□□□ 0.25
TOM1L1-221ENST00000575882 AMER2Q8N7J2 671 aa16.62■□□□□ 0.25
TOM1L1-221ENST00000575882 FAM83FQ8NEG4 500 aaPredicted RBP16.62■□□□□ 0.25
TOM1L1-221ENST00000575882 SPPL2AQ8TCT8 520 aa16.62■□□□□ 0.25
TOM1L1-221ENST00000575882 STARD8Q92502 1023 aa16.62■□□□□ 0.25
TOM1L1-221ENST00000575882 TMEM175Q9BSA9 504 aa16.62■□□□□ 0.25
TOM1L1-221ENST00000575882 PLCXD1Q9NUJ7 323 aa16.62■□□□□ 0.25
TOM1L1-221ENST00000575882 RUVBL1Q9Y265 456 aaKnown RBP16.62■□□□□ 0.25
TOM1L1-221ENST00000575882 ATP11BQ9Y2G3 1177 aa16.62■□□□□ 0.25
TOM1L1-221ENST00000575882 PADI2Q9Y2J8 665 aa16.62■□□□□ 0.25
TOM1L1-221ENST00000575882 RBMX2Q9Y388 322 aaKnown RBP16.62■□□□□ 0.25
TOM1L1-221ENST00000575882 YIPF1Q9Y548 306 aa16.62■□□□□ 0.25
TOM1L1-221ENST00000575882 LYVE1Q9Y5Y7 322 aa16.62■□□□□ 0.25
TOM1L1-221ENST00000575882 LOC100506127A0A0U1RQW1 187 aa16.62■□□□□ 0.25
TOM1L1-221ENST00000575882 CLCA1A8K7I4 914 aa16.62■□□□□ 0.25
TOM1L1-221ENST00000575882 TMEM229AB2RXF0 380 aa16.62■□□□□ 0.25
TOM1L1-221ENST00000575882 GFRA2O00451 464 aa16.62■□□□□ 0.25
TOM1L1-221ENST00000575882 DSCR3O14972 297 aa16.62■□□□□ 0.25
TOM1L1-221ENST00000575882 SCAMP2O15127 329 aaKnown RBP16.62■□□□□ 0.25
TOM1L1-221ENST00000575882 GREM1O60565 184 aa16.62■□□□□ 0.25
TOM1L1-221ENST00000575882 LATS1O95835 1130 aa16.62■□□□□ 0.25
TOM1L1-221ENST00000575882 MPC1LP0DKB6 136 aa16.62■□□□□ 0.25
TOM1L1-221ENST00000575882 LHCGRP22888 699 aa16.62■□□□□ 0.25
TOM1L1-221ENST00000575882 PTSQ03393 145 aa16.62■□□□□ 0.25
TOM1L1-221ENST00000575882 GAB1Q13480 694 aa16.62■□□□□ 0.25
TOM1L1-221ENST00000575882 CCDC92Q53HC0 331 aaPredicted RBP16.62■□□□□ 0.25
TOM1L1-221ENST00000575882 XKR6Q5GH73 641 aa16.62■□□□□ 0.25
TOM1L1-221ENST00000575882 TPRG1LQ5T0D9 272 aa16.62■□□□□ 0.25
TOM1L1-221ENST00000575882 TSEN54Q7Z6J9 526 aaKnown RBP16.62■□□□□ 0.25
TOM1L1-221ENST00000575882 NPAS4Q8IUM7 802 aa16.62■□□□□ 0.25
TOM1L1-221ENST00000575882 ZNF675Q8TD23 568 aa16.62■□□□□ 0.25
TOM1L1-221ENST00000575882 DOHHQ9BU89 302 aa16.62■□□□□ 0.25
TOM1L1-221ENST00000575882 RAD18Q9NS91 495 aa16.62■□□□□ 0.25
TOM1L1-221ENST00000575882 GPR83Q9NYM4 423 aa16.62■□□□□ 0.25
TOM1L1-221ENST00000575882 SPASTQ9UBP0 616 aa16.62■□□□□ 0.25
TOM1L1-221ENST00000575882 CLEC4EQ9ULY5 219 aa16.62■□□□□ 0.25
TOM1L1-221ENST00000575882 IGLV3-16A0A075B6K0 115 aa16.61■□□□□ 0.25
TOM1L1-221ENST00000575882 GFYI3L273 518 aa16.61■□□□□ 0.25
TOM1L1-221ENST00000575882 SH3BGRLO75368 114 aa16.61■□□□□ 0.25
TOM1L1-221ENST00000575882 RPLP0P05388 317 aaKnown RBP16.61■□□□□ 0.25
TOM1L1-221ENST00000575882 IDH2P48735 452 aaKnown RBP16.61■□□□□ 0.25
TOM1L1-221ENST00000575882 SP140Q13342 867 aa16.61■□□□□ 0.25
TOM1L1-221ENST00000575882 RGNQ15493 299 aa16.61■□□□□ 0.25
TOM1L1-221ENST00000575882 SOWAHCQ53LP3 525 aaPredicted RBP16.61■□□□□ 0.25
TOM1L1-221ENST00000575882 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.61■□□□□ 0.25
TOM1L1-221ENST00000575882 SERPINA13PQ6UXR4 307 aa16.61■□□□□ 0.25
TOM1L1-221ENST00000575882 SLC5A8Q8N695 610 aa16.61■□□□□ 0.25
TOM1L1-221ENST00000575882 ARL14EPQ8N8R7 260 aaPredicted RBP16.61■□□□□ 0.25
TOM1L1-221ENST00000575882 OR2AP1Q8NGE2 309 aa16.61■□□□□ 0.25
TOM1L1-221ENST00000575882 EFHD2Q96C19 240 aaPredicted RBP16.61■□□□□ 0.25
TOM1L1-221ENST00000575882 SCRN2Q96FV2 425 aa16.61■□□□□ 0.25
TOM1L1-221ENST00000575882 MAGEB10Q96LZ2 347 aaPredicted RBP16.61■□□□□ 0.25
TOM1L1-221ENST00000575882 CLSTN3Q9BQT9 956 aa16.61■□□□□ 0.25
TOM1L1-221ENST00000575882 SPATA9Q9BWV2 254 aa16.61■□□□□ 0.25
TOM1L1-221ENST00000575882 RNF167Q9H6Y7 350 aa16.61■□□□□ 0.25
TOM1L1-221ENST00000575882 POU2F3Q9UKI9 436 aa16.61■□□□□ 0.25
TOM1L1-221ENST00000575882 UGT2A1Q9Y4X1 527 aa16.61■□□□□ 0.25
TOM1L1-221ENST00000575882 C1orf226A1L170 272 aa16.61■□□□□ 0.25
TOM1L1-221ENST00000575882 MTX2O75431 263 aa16.61■□□□□ 0.25
TOM1L1-221ENST00000575882 OXSR1O95747 527 aaPredicted RBP16.61■□□□□ 0.25
TOM1L1-221ENST00000575882 OPN1SWP03999 348 aa16.61■□□□□ 0.25
TOM1L1-221ENST00000575882 TNFRSF1BP20333 461 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms