RNA–Protein interactions for RNA: ENST00000574911.5

NCBP3-204, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 2,701 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-204ENST00000574911 CCDC71Q8IV32 467 aaPredicted RBP8.63□□□□□ -1.03
NCBP3-204ENST00000574911 OR56A3Q8NH54 315 aa8.63□□□□□ -1.03
NCBP3-204ENST00000574911 ZFP90Q8TF47 636 aa8.63□□□□□ -1.03
NCBP3-204ENST00000574911 FOXJ1Q92949 421 aa8.63□□□□□ -1.03
NCBP3-204ENST00000574911 GLMNQ92990 594 aa8.63□□□□□ -1.03
NCBP3-204ENST00000574911 COQ8BQ96D53 544 aa8.63□□□□□ -1.03
NCBP3-204ENST00000574911 PKP4Q99569 1192 aa8.63□□□□□ -1.03
NCBP3-204ENST00000574911 EPYCQ99645 322 aa8.63□□□□□ -1.03
NCBP3-204ENST00000574911 MYOCQ99972 504 aa8.63□□□□□ -1.03
NCBP3-204ENST00000574911 HEPHQ9BQS7 1158 aa8.63□□□□□ -1.03
NCBP3-204ENST00000574911 RIOK2Q9BVS4 552 aaKnown RBP8.63□□□□□ -1.03
NCBP3-204ENST00000574911 REEP1Q9H902 201 aa8.63□□□□□ -1.03
NCBP3-204ENST00000574911 NECTIN3Q9NQS3 549 aa8.63□□□□□ -1.03
NCBP3-204ENST00000574911 RAD18Q9NS91 495 aa8.63□□□□□ -1.03
NCBP3-204ENST00000574911 KRT84Q9NSB2 600 aa8.63□□□□□ -1.03
NCBP3-204ENST00000574911 MAPRE3Q9UPY8 281 aa8.63□□□□□ -1.03
NCBP3-204ENST00000574911 COQ6Q9Y2Z9 468 aa8.63□□□□□ -1.03
NCBP3-204ENST00000574911 AP1M2Q9Y6Q5 423 aa8.63□□□□□ -1.03
NCBP3-204ENST00000574911 PLXNA2O75051 1894 aa8.63□□□□□ -1.03
NCBP3-204ENST00000574911 NEDD8-MDP1E9PL57 170 aa8.63□□□□□ -1.03
NCBP3-204ENST00000574911 QSOX1O00391 747 aa8.63□□□□□ -1.03
NCBP3-204ENST00000574911 NPC1O15118 1278 aa8.63□□□□□ -1.03
NCBP3-204ENST00000574911 SLC22A1O15245 554 aa8.63□□□□□ -1.03
NCBP3-204ENST00000574911 TSPAN6O43657 245 aa8.63□□□□□ -1.03
NCBP3-204ENST00000574911 RGS10O43665 173 aa8.63□□□□□ -1.03
NCBP3-204ENST00000574911 MAN1A2O60476 641 aa8.63□□□□□ -1.03
NCBP3-204ENST00000574911 FKBP9O95302 570 aa8.63□□□□□ -1.03
NCBP3-204ENST00000574911 FUCA1P04066 466 aa8.63□□□□□ -1.03
NCBP3-204ENST00000574911 C8AP07357 584 aa8.63□□□□□ -1.03
NCBP3-204ENST00000574911 ANXA4P09525 319 aaPredicted RBP8.63□□□□□ -1.03
NCBP3-204ENST00000574911 EFNA1P20827 205 aaPredicted RBP8.63□□□□□ -1.03
NCBP3-204ENST00000574911 PPIBP23284 216 aaKnown RBP8.63□□□□□ -1.03
NCBP3-204ENST00000574911 IMPA1P29218 277 aa8.63□□□□□ -1.03
NCBP3-204ENST00000574911 EPHA2P29317 976 aa8.63□□□□□ -1.03
NCBP3-204ENST00000574911 IDUAP35475 653 aa8.63□□□□□ -1.03
NCBP3-204ENST00000574911 CCR2P41597 374 aa8.63□□□□□ -1.03
NCBP3-204ENST00000574911 PRMT2P55345 433 aa8.63□□□□□ -1.03
NCBP3-204ENST00000574911 PHEXP78562 749 aa8.63□□□□□ -1.03
NCBP3-204ENST00000574911 MVKQ03426 396 aa8.63□□□□□ -1.03
NCBP3-204ENST00000574911 E2F2Q14209 437 aa8.63□□□□□ -1.03
NCBP3-204ENST00000574911 DMC1Q14565 340 aa8.63□□□□□ -1.03
NCBP3-204ENST00000574911 ADPRMQ3LIE5 342 aa8.63□□□□□ -1.03
NCBP3-204ENST00000574911 ANXA8L1Q5VT79 327 aa8.63□□□□□ -1.03
NCBP3-204ENST00000574911 ADNP2Q6IQ32 1131 aa8.63□□□□□ -1.03
NCBP3-204ENST00000574911 CCDC149Q6ZUS6 474 aa8.63□□□□□ -1.03
NCBP3-204ENST00000574911 C1orf52Q8N6N3 182 aaKnown RBP8.63□□□□□ -1.03
NCBP3-204ENST00000574911 RASGEF1AQ8N9B8 481 aa8.63□□□□□ -1.03
NCBP3-204ENST00000574911 ATG16L2Q8NAA4 619 aa8.63□□□□□ -1.03
NCBP3-204ENST00000574911 CDC26Q8NHZ8 85 aa8.63□□□□□ -1.03
NCBP3-204ENST00000574911 BTN2A2Q8WVV5 523 aa8.63□□□□□ -1.03
NCBP3-204ENST00000574911 MED8Q96G25 268 aa8.63□□□□□ -1.03
NCBP3-204ENST00000574911 SIGLEC11Q96RL6 698 aa8.63□□□□□ -1.03
NCBP3-204ENST00000574911 CORO1BQ9BR76 489 aa8.63□□□□□ -1.03
NCBP3-204ENST00000574911 ZSCAN5AQ9BUG6 496 aa8.63□□□□□ -1.03
NCBP3-204ENST00000574911 AKIP1Q9NQ31 210 aa8.63□□□□□ -1.03
NCBP3-204ENST00000574911 PAK6Q9NQU5 681 aaPredicted RBP8.63□□□□□ -1.03
NCBP3-204ENST00000574911 KIF17Q9P2E2 1029 aa8.63□□□□□ -1.03
NCBP3-204ENST00000574911 OGDHLQ9ULD0 1010 aa8.63□□□□□ -1.03
NCBP3-204ENST00000574911 CORO2BQ9UQ03 480 aa8.63□□□□□ -1.03
NCBP3-204ENST00000574911 FUOMA2VDF0 154 aa8.62□□□□□ -1.03
NCBP3-204ENST00000574911 CLDN25C9JDP6 229 aa8.62□□□□□ -1.03
NCBP3-204ENST00000574911 FAM20BO75063 409 aa8.62□□□□□ -1.03
NCBP3-204ENST00000574911 GCM2O75603 506 aaPredicted RBP8.62□□□□□ -1.03
NCBP3-204ENST00000574911 LEFTY1O75610 366 aa8.62□□□□□ -1.03
NCBP3-204ENST00000574911 CA8P35219 290 aa8.62□□□□□ -1.03
NCBP3-204ENST00000574911 HPCAL1P37235 193 aa8.62□□□□□ -1.03
NCBP3-204ENST00000574911 BDKRB1P46663 353 aa8.62□□□□□ -1.03
NCBP3-204ENST00000574911 PREPP48147 710 aa8.62□□□□□ -1.03
NCBP3-204ENST00000574911 PSMD7P51665 324 aa8.62□□□□□ -1.03
NCBP3-204ENST00000574911 CTSCP53634 463 aa8.62□□□□□ -1.03
NCBP3-204ENST00000574911 RPP38P78345 283 aaKnown RBP8.62□□□□□ -1.03
NCBP3-204ENST00000574911 OCA2Q04671 838 aa8.62□□□□□ -1.03
NCBP3-204ENST00000574911 NPRL3Q12980 569 aa8.62□□□□□ -1.03
NCBP3-204ENST00000574911 ITGADQ13349 1161 aa8.62□□□□□ -1.03
NCBP3-204ENST00000574911 GAB1Q13480 694 aa8.62□□□□□ -1.03
NCBP3-204ENST00000574911 CLCA4Q14CN2 919 aa8.62□□□□□ -1.03
NCBP3-204ENST00000574911 RGNQ15493 299 aa8.62□□□□□ -1.03
NCBP3-204ENST00000574911 SMN1Q16637 294 aaKnown RBP8.62□□□□□ -1.03
NCBP3-204ENST00000574911 RGS21Q2M5E4 152 aa8.62□□□□□ -1.03
NCBP3-204ENST00000574911 HKDC1Q2TB90 917 aa8.62□□□□□ -1.03
NCBP3-204ENST00000574911 TRIM60Q495X7 471 aa8.62□□□□□ -1.03
NCBP3-204ENST00000574911 SYTL3Q4VX76 610 aa8.62□□□□□ -1.03
NCBP3-204ENST00000574911 ARSIQ5FYB1 569 aa8.62□□□□□ -1.03
NCBP3-204ENST00000574911 TMEM215Q68D42 235 aa8.62□□□□□ -1.03
NCBP3-204ENST00000574911 PRSS48Q7RTY5 328 aa8.62□□□□□ -1.03
NCBP3-204ENST00000574911 TSEN54Q7Z6J9 526 aaKnown RBP8.62□□□□□ -1.03
NCBP3-204ENST00000574911 TECPR1Q7Z6L1 1165 aa8.62□□□□□ -1.03
NCBP3-204ENST00000574911 KIAA0907Q7Z7F0 614 aaPredicted RBP8.62□□□□□ -1.03
NCBP3-204ENST00000574911 SLCO6A1Q86UG4 719 aa8.62□□□□□ -1.03
NCBP3-204ENST00000574911 NPAS3Q8IXF0 933 aa8.62□□□□□ -1.03
NCBP3-204ENST00000574911 SVOPQ8N4V2 548 aa8.62□□□□□ -1.03
NCBP3-204ENST00000574911 ZNF540Q8NDQ6 660 aa8.62□□□□□ -1.03
NCBP3-204ENST00000574911 OR7G3Q8NG95 312 aa8.62□□□□□ -1.03
NCBP3-204ENST00000574911 APH1BQ8WW43 257 aa8.62□□□□□ -1.03
NCBP3-204ENST00000574911 IPCEF1Q8WWN9 437 aaPredicted RBP8.62□□□□□ -1.03
NCBP3-204ENST00000574911 MYLIPQ8WY64 445 aa8.62□□□□□ -1.03
NCBP3-204ENST00000574911 IRF7Q92985 503 aa8.62□□□□□ -1.03
NCBP3-204ENST00000574911 MRGPRX3Q96LB0 322 aa8.62□□□□□ -1.03
NCBP3-204ENST00000574911 TOX2Q96NM4 488 aa8.62□□□□□ -1.03
NCBP3-204ENST00000574911 DEFB118Q96PH6 123 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms