RNA–Protein interactions for RNA: ENST00000573895.1

ABR-223, Transcript of ABR, RhoGEF and GTPase activating protein, human

TSL 3

Gene ABR, Length 1,010 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABR-223	ENST00000573895	CCDC138	Q96M89	665 aa		13.78	□□□□□ -0.2
ABR-223	ENST00000573895	IL17F	Q96PD4	163 aa		13.78	□□□□□ -0.2
ABR-223	ENST00000573895	C17orf62	Q9BQA9	187 aa		13.78	□□□□□ -0.2
ABR-223	ENST00000573895	NLN	Q9BYT8	704 aa		13.78	□□□□□ -0.2
ABR-223	ENST00000573895	CD274	Q9NZQ7	290 aa		13.78	□□□□□ -0.2
ABR-223	ENST00000573895	ADAMTS6	Q9UKP5	1117 aa		13.78	□□□□□ -0.2
ABR-223	ENST00000573895	IKZF3	Q9UKT9	509 aa		13.78	□□□□□ -0.2
ABR-223	ENST00000573895	PDE10A	Q9Y233	779 aa		13.78	□□□□□ -0.2
ABR-223	ENST00000573895	FARSA	Q9Y285	508 aa	Known RBP	13.78	□□□□□ -0.2
ABR-223	ENST00000573895	TNPO3	Q9Y5L0	923 aa	Known RBP	13.78	□□□□□ -0.2
ABR-223	ENST00000573895	MRPS18B	Q9Y676	258 aa	Known RBP	13.78	□□□□□ -0.2
ABR-223	ENST00000573895	CCDC88C	Q9P219	2028 aa		13.78	□□□□□ -0.2
ABR-223	ENST00000573895	ZNF839	A8K0R7	811 aa		13.77	□□□□□ -0.21
ABR-223	ENST00000573895	ARHGEF33	A8MVX0	844 aa		13.77	□□□□□ -0.21
ABR-223	ENST00000573895	SUPT3H	B4E1H0	165 aa		13.77	□□□□□ -0.21
ABR-223	ENST00000573895	STX16-NPEPL1	H3BU86	382 aa		13.77	□□□□□ -0.21
ABR-223	ENST00000573895	STX16	O14662	325 aa		13.77	□□□□□ -0.21
ABR-223	ENST00000573895	SUPT3H	O75486	399 aa		13.77	□□□□□ -0.21
ABR-223	ENST00000573895	SNUPN	O95149	360 aa	Known RBP	13.77	□□□□□ -0.21
ABR-223	ENST00000573895	CD63	P08962	238 aa		13.77	□□□□□ -0.21
ABR-223	ENST00000573895	PRKAR1A	P10644	381 aa		13.77	□□□□□ -0.21
ABR-223	ENST00000573895	MTHFD2	P13995	350 aa		13.77	□□□□□ -0.21
ABR-223	ENST00000573895	IMPDH1	P20839	514 aa		13.77	□□□□□ -0.21
ABR-223	ENST00000573895	GRK2	P25098	689 aa		13.77	□□□□□ -0.21
ABR-223	ENST00000573895	MDC1	Q14676	2089 aa	Known RBP	13.77	□□□□□ -0.21
ABR-223	ENST00000573895	PCLAF	Q15004	111 aa		13.77	□□□□□ -0.21
ABR-223	ENST00000573895	PDK4	Q16654	411 aa		13.77	□□□□□ -0.21
ABR-223	ENST00000573895	CCSMST1	Q4G0I0	132 aa		13.77	□□□□□ -0.21
ABR-223	ENST00000573895	ZC3H12B	Q5HYM0	836 aa	Known RBP	13.77	□□□□□ -0.21
ABR-223	ENST00000573895	PRAMEF17	Q5VTA0	474 aa		13.77	□□□□□ -0.21
ABR-223	ENST00000573895	LIPM	Q5VYY2	423 aa		13.77	□□□□□ -0.21
ABR-223	ENST00000573895	ZNF385C	Q66K41	422 aa	Predicted RBP	13.77	□□□□□ -0.21
ABR-223	ENST00000573895	ATG16L1	Q676U5	607 aa		13.77	□□□□□ -0.21
ABR-223	ENST00000573895	FAM199X	Q6PEV8	388 aa	Predicted RBP	13.77	□□□□□ -0.21
ABR-223	ENST00000573895	C10orf107	Q8IVU9	208 aa		13.77	□□□□□ -0.21
ABR-223	ENST00000573895	SPNS2	Q8IVW8	549 aa		13.77	□□□□□ -0.21
ABR-223	ENST00000573895	SYTL1	Q8IYJ3	562 aa		13.77	□□□□□ -0.21
ABR-223	ENST00000573895	PDPR	Q8NCN5	879 aa		13.77	□□□□□ -0.21
ABR-223	ENST00000573895	PROKR1	Q8TCW9	393 aa		13.77	□□□□□ -0.21
ABR-223	ENST00000573895	APOBEC4	Q8WW27	367 aa	Known RBP	13.77	□□□□□ -0.21
ABR-223	ENST00000573895	DLG3	Q92796	817 aa		13.77	□□□□□ -0.21
ABR-223	ENST00000573895	MAGEB18	Q96M61	343 aa		13.77	□□□□□ -0.21
ABR-223	ENST00000573895	SLC7A5P2	Q9GIP4	190 aa		13.77	□□□□□ -0.21
ABR-223	ENST00000573895	CHST8	Q9H2A9	424 aa		13.77	□□□□□ -0.21
ABR-223	ENST00000573895	ACTL8	Q9H568	366 aa		13.77	□□□□□ -0.21
ABR-223	ENST00000573895	CCDC134	Q9H6E4	229 aa		13.77	□□□□□ -0.21
ABR-223	ENST00000573895	MLXIPL	Q9NP71	852 aa		13.77	□□□□□ -0.21
ABR-223	ENST00000573895	STARD5	Q9NSY2	213 aa		13.77	□□□□□ -0.21
ABR-223	ENST00000573895	SRPK3	Q9UPE1	567 aa		13.77	□□□□□ -0.21
ABR-223	ENST00000573895	POLH	Q9Y253	713 aa		13.77	□□□□□ -0.21
ABR-223	ENST00000573895		A0A1W2PPV9	198 aa		13.76	□□□□□ -0.21
ABR-223	ENST00000573895	UBXN8	O00124	270 aa		13.76	□□□□□ -0.21
ABR-223	ENST00000573895	KLF11	O14901	512 aa		13.76	□□□□□ -0.21
ABR-223	ENST00000573895	ZSCAN9	O15535	394 aa	Predicted RBP	13.76	□□□□□ -0.21
ABR-223	ENST00000573895	SRPX2	O60687	465 aa	Predicted RBP	13.76	□□□□□ -0.21
ABR-223	ENST00000573895	FAM87A	P0C7U9	286 aa		13.76	□□□□□ -0.21
ABR-223	ENST00000573895	GFAP	P14136	432 aa		13.76	□□□□□ -0.21
ABR-223	ENST00000573895	AGXT	P21549	392 aa		13.76	□□□□□ -0.21
ABR-223	ENST00000573895	GGT5	P36269	586 aa		13.76	□□□□□ -0.21
ABR-223	ENST00000573895	SERPINB5	P36952	375 aa		13.76	□□□□□ -0.21
ABR-223	ENST00000573895	GRIA3	P42263	894 aa		13.76	□□□□□ -0.21
ABR-223	ENST00000573895	POLE2	P56282	527 aa		13.76	□□□□□ -0.21
ABR-223	ENST00000573895	ERV3-1	Q14264	604 aa		13.76	□□□□□ -0.21
ABR-223	ENST00000573895	EEF1AKMT2	Q5JPI9	291 aa	Known RBP	13.76	□□□□□ -0.21
ABR-223	ENST00000573895	TCTE1	Q5JU00	501 aa		13.76	□□□□□ -0.21
ABR-223	ENST00000573895	YOD1	Q5VVQ6	348 aa	Predicted RBP	13.76	□□□□□ -0.21
ABR-223	ENST00000573895	FCRL6	Q6DN72	434 aa		13.76	□□□□□ -0.21
ABR-223	ENST00000573895	FIGLA	Q6QHK4	219 aa		13.76	□□□□□ -0.21
ABR-223	ENST00000573895	RGS9BP	Q6ZS82	235 aa		13.76	□□□□□ -0.21
ABR-223	ENST00000573895	C2orf73	Q8N5S3	287 aa	Predicted RBP	13.76	□□□□□ -0.21
ABR-223	ENST00000573895	OR2L3	Q8NG85	312 aa		13.76	□□□□□ -0.21
ABR-223	ENST00000573895	OR2A1	Q8NGT9	310 aa		13.76	□□□□□ -0.21
ABR-223	ENST00000573895	PPP1R14C	Q8TAE6	165 aa		13.76	□□□□□ -0.21
ABR-223	ENST00000573895	THAP4	Q8WY91	577 aa		13.76	□□□□□ -0.21
ABR-223	ENST00000573895	SMPDL3A	Q92484	453 aa		13.76	□□□□□ -0.21
ABR-223	ENST00000573895	L3HYPDH	Q96EM0	354 aa		13.76	□□□□□ -0.21
ABR-223	ENST00000573895	RNF31	Q96EP0	1072 aa		13.76	□□□□□ -0.21
ABR-223	ENST00000573895	ZNF285	Q96NJ3	590 aa		13.76	□□□□□ -0.21
ABR-223	ENST00000573895	SLC25A18	Q9H1K4	315 aa		13.76	□□□□□ -0.21
ABR-223	ENST00000573895	MANSC1	Q9H8J5	431 aa		13.76	□□□□□ -0.21
ABR-223	ENST00000573895	ARL15	Q9NXU5	204 aa		13.76	□□□□□ -0.21
ABR-223	ENST00000573895	CIDEB	Q9UHD4	219 aa		13.76	□□□□□ -0.21
ABR-223	ENST00000573895	TSR3	Q9UJK0	312 aa	Known RBP	13.76	□□□□□ -0.21
ABR-223	ENST00000573895	PTBP2	Q9UKA9	531 aa	Known RBP	13.76	□□□□□ -0.21
ABR-223	ENST00000573895	ADAM21	Q9UKJ8	722 aa		13.76	□□□□□ -0.21
ABR-223	ENST00000573895	MED13	Q9UHV7	2174 aa		13.75	□□□□□ -0.21
ABR-223	ENST00000573895	WDR91	A4D1P6	747 aa		13.75	□□□□□ -0.21
ABR-223	ENST00000573895		A8MT66	165 aa		13.75	□□□□□ -0.21
ABR-223	ENST00000573895		B8ZZF3	427 aa		13.75	□□□□□ -0.21
ABR-223	ENST00000573895	HCRTR1	O43613	425 aa		13.75	□□□□□ -0.21
ABR-223	ENST00000573895	SERPINE1	P05121	402 aa		13.75	□□□□□ -0.21
ABR-223	ENST00000573895	CAPN1	P07384	714 aa		13.75	□□□□□ -0.21
ABR-223	ENST00000573895	GCGR	P47871	477 aa		13.75	□□□□□ -0.21
ABR-223	ENST00000573895	ARSF	P54793	590 aa		13.75	□□□□□ -0.21
ABR-223	ENST00000573895	HERVK_113	P63132	956 aa		13.75	□□□□□ -0.21
ABR-223	ENST00000573895	GUCY1A3	Q02108	690 aa		13.75	□□□□□ -0.21
ABR-223	ENST00000573895	KCNAB2	Q13303	367 aa		13.75	□□□□□ -0.21
ABR-223	ENST00000573895	SETDB1	Q15047	1291 aa		13.75	□□□□□ -0.21
ABR-223	ENST00000573895	PHKG1	Q16816	387 aa		13.75	□□□□□ -0.21
ABR-223	ENST00000573895	PFKFB4	Q16877	469 aa		13.75	□□□□□ -0.21

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