RNA–Protein interactions for RNA: ENST00000573600.5

CTDNEP1-208, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTDNEP1, Length 1,724 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-208ENST00000573600 ERN1O75460 977 aaKnown RBP27.96■■■□□ 2.07
CTDNEP1-208ENST00000573600 CCNDBP1O95273 360 aa27.96■■■□□ 2.07
CTDNEP1-208ENST00000573600 EML2O95834 649 aa27.96■■■□□ 2.07
CTDNEP1-208ENST00000573600 VHLP40337 213 aa27.96■■■□□ 2.07
CTDNEP1-208ENST00000573600 KIR3DL1P43629 444 aa27.96■■■□□ 2.07
CTDNEP1-208ENST00000573600 PGS1Q32NB8 556 aa27.96■■■□□ 2.07
CTDNEP1-208ENST00000573600 VN1R5Q7Z5H4 357 aa27.96■■■□□ 2.07
CTDNEP1-208ENST00000573600 SPATA24Q86W54 205 aa27.96■■■□□ 2.07
CTDNEP1-208ENST00000573600 NRROSQ86YC3 692 aa27.96■■■□□ 2.07
CTDNEP1-208ENST00000573600 SPEM1Q8N4L4 309 aa27.96■■■□□ 2.07
CTDNEP1-208ENST00000573600 GPBAR1Q8TDU6 330 aa27.96■■■□□ 2.07
CTDNEP1-208ENST00000573600 SNX19Q92543 992 aa27.96■■■□□ 2.07
CTDNEP1-208ENST00000573600 PPM1MQ96MI6 270 aa27.96■■■□□ 2.07
CTDNEP1-208ENST00000573600 PRAP1Q96NZ9 151 aa27.96■■■□□ 2.07
CTDNEP1-208ENST00000573600 GSDMCQ9BYG8 508 aa27.96■■■□□ 2.07
CTDNEP1-208ENST00000573600 TRIM15Q9C019 465 aa27.96■■■□□ 2.07
CTDNEP1-208ENST00000573600 OR51B5Q9H339 312 aa27.96■■■□□ 2.07
CTDNEP1-208ENST00000573600 AHSPQ9NZD4 102 aa27.96■■■□□ 2.07
CTDNEP1-208ENST00000573600 OR6C2Q9NZP2 312 aa27.96■■■□□ 2.07
CTDNEP1-208ENST00000573600 ZNF624Q9P2J8 865 aaPredicted RBP27.96■■■□□ 2.07
CTDNEP1-208ENST00000573600 AP3M1Q9Y2T2 418 aa27.96■■■□□ 2.07
CTDNEP1-208ENST00000573600 LIPEQ05469 1076 aa27.95■■■□□ 2.07
CTDNEP1-208ENST00000573600 FRMD1Q8N878 549 aa27.95■■■□□ 2.07
CTDNEP1-208ENST00000573600 RSRC1Q96IZ7 334 aaKnown RBP27.95■■■□□ 2.07
CTDNEP1-208ENST00000573600 LRGUKQ96M69 825 aa27.95■■■□□ 2.07
CTDNEP1-208ENST00000573600 SH3GL1Q99961 368 aa27.95■■■□□ 2.07
CTDNEP1-208ENST00000573600 ORAI3Q9BRQ5 295 aa27.95■■■□□ 2.07
CTDNEP1-208ENST00000573600 CHRDQ9H2X0 955 aa27.95■■■□□ 2.07
CTDNEP1-208ENST00000573600 MRPS30Q9NP92 439 aaKnown RBP27.95■■■□□ 2.07
CTDNEP1-208ENST00000573600 GNG14A0A1W2PPG7 69 aa27.95■■■□□ 2.06
CTDNEP1-208ENST00000573600 GSK3BP49841 420 aa27.95■■■□□ 2.06
CTDNEP1-208ENST00000573600 ATXN3P54252 364 aaPredicted RBP27.95■■■□□ 2.06
CTDNEP1-208ENST00000573600 PHC1P78364 1004 aa27.95■■■□□ 2.06
CTDNEP1-208ENST00000573600 CSNK1G2P78368 415 aa27.95■■■□□ 2.06
CTDNEP1-208ENST00000573600 MRPS22P82650 360 aaKnown RBP27.95■■■□□ 2.06
CTDNEP1-208ENST00000573600 PRPF38BQ5VTL8 546 aaKnown RBP27.95■■■□□ 2.06
CTDNEP1-208ENST00000573600 COMMD6Q7Z4G1 85 aa27.95■■■□□ 2.06
CTDNEP1-208ENST00000573600 DCP2Q8IU60 420 aaKnown RBP27.95■■■□□ 2.06
CTDNEP1-208ENST00000573600 UBALD2Q8IYN6 164 aa27.95■■■□□ 2.06
CTDNEP1-208ENST00000573600 FAM160A2Q8N612 972 aaPredicted RBP27.95■■■□□ 2.06
CTDNEP1-208ENST00000573600 OR8J2Q8NGG1 315 aa27.95■■■□□ 2.06
CTDNEP1-208ENST00000573600 LCN9Q8WX39 176 aa27.95■■■□□ 2.06
CTDNEP1-208ENST00000573600 GFM2Q969S9 779 aaKnown RBP27.95■■■□□ 2.06
CTDNEP1-208ENST00000573600 KLHDC7BQ96G42 594 aa27.95■■■□□ 2.06
CTDNEP1-208ENST00000573600 ANKRD27Q96NW4 1050 aa27.95■■■□□ 2.06
CTDNEP1-208ENST00000573600 KCTD14Q9BQ13 255 aaPredicted RBP27.95■■■□□ 2.06
CTDNEP1-208ENST00000573600 TBC1D17Q9HA65 648 aa27.95■■■□□ 2.06
CTDNEP1-208ENST00000573600 FANCMQ8IYD8 2048 aa27.95■■■□□ 2.06
CTDNEP1-208ENST00000573600 A0A096LPI6 279 aa27.94■■■□□ 2.06
CTDNEP1-208ENST00000573600 PRAMEF33A0A0G2JMD5 474 aa27.94■■■□□ 2.06
CTDNEP1-208ENST00000573600 H3BNX3 289 aa27.94■■■□□ 2.06
CTDNEP1-208ENST00000573600 AKAP10O43572 662 aa27.94■■■□□ 2.06
CTDNEP1-208ENST00000573600 SEMA3DO95025 777 aa27.94■■■□□ 2.06
CTDNEP1-208ENST00000573600 C8BP07358 591 aa27.94■■■□□ 2.06
CTDNEP1-208ENST00000573600 COX7A2P14406 83 aa27.94■■■□□ 2.06
CTDNEP1-208ENST00000573600 HRH2P25021 359 aa27.94■■■□□ 2.06
CTDNEP1-208ENST00000573600 HPCAL1P37235 193 aa27.94■■■□□ 2.06
CTDNEP1-208ENST00000573600 UGT8Q16880 541 aa27.94■■■□□ 2.06
CTDNEP1-208ENST00000573600 LRIF1Q5T3J3 769 aa27.94■■■□□ 2.06
CTDNEP1-208ENST00000573600 ARMCX6Q7L4S7 300 aa27.94■■■□□ 2.06
CTDNEP1-208ENST00000573600 AMIGO1Q86WK6 493 aa27.94■■■□□ 2.06
CTDNEP1-208ENST00000573600 CAMKK1Q8N5S9 505 aa27.94■■■□□ 2.06
CTDNEP1-208ENST00000573600 CLDN23Q96B33 292 aa27.94■■■□□ 2.06
CTDNEP1-208ENST00000573600 PRPF18Q99633 342 aaKnown RBP27.94■■■□□ 2.06
CTDNEP1-208ENST00000573600 TMEM184CQ9NVA4 438 aa27.94■■■□□ 2.06
CTDNEP1-208ENST00000573600 ACTR3BQ9P1U1 418 aa27.94■■■□□ 2.06
CTDNEP1-208ENST00000573600 SCAMP2O15127 329 aaKnown RBP27.93■■■□□ 2.06
CTDNEP1-208ENST00000573600 BLKP51451 505 aa27.93■■■□□ 2.06
CTDNEP1-208ENST00000573600 PLIN5Q00G26 463 aa27.93■■■□□ 2.06
CTDNEP1-208ENST00000573600 RHDQ02161 417 aa27.93■■■□□ 2.06
CTDNEP1-208ENST00000573600 ZNF763Q0D2J5 394 aa27.93■■■□□ 2.06
CTDNEP1-208ENST00000573600 EIF2B5Q13144 721 aaKnown RBP27.93■■■□□ 2.06
CTDNEP1-208ENST00000573600 TCEA2Q15560 299 aa27.93■■■□□ 2.06
CTDNEP1-208ENST00000573600 SF1Q15637 639 aaKnown RBP27.93■■■□□ 2.06
CTDNEP1-208ENST00000573600 PTRH1Q86Y79 214 aaKnown RBP27.93■■■□□ 2.06
CTDNEP1-208ENST00000573600 TTLQ8NG68 377 aa27.93■■■□□ 2.06
CTDNEP1-208ENST00000573600 CDC26Q8NHZ8 85 aa27.93■■■□□ 2.06
CTDNEP1-208ENST00000573600 ZFPM2Q8WW38 1151 aa27.93■■■□□ 2.06
CTDNEP1-208ENST00000573600 TACO1Q9BSH4 297 aaKnown RBP27.93■■■□□ 2.06
CTDNEP1-208ENST00000573600 FAM120CQ9NX05 1096 aaKnown RBP27.93■■■□□ 2.06
CTDNEP1-208ENST00000573600 VAPAQ9P0L0 249 aa27.93■■■□□ 2.06
CTDNEP1-208ENST00000573600 NIPSNAP3AQ9UFN0 247 aaPredicted RBP27.93■■■□□ 2.06
CTDNEP1-208ENST00000573600 MCM8Q9UJA3 840 aa27.93■■■□□ 2.06
CTDNEP1-208ENST00000573600 HTR1EP28566 365 aa27.92■■■□□ 2.06
CTDNEP1-208ENST00000573600 CMPK1P30085 196 aa27.92■■■□□ 2.06
CTDNEP1-208ENST00000573600 GRK3P35626 688 aa27.92■■■□□ 2.06
CTDNEP1-208ENST00000573600 SLC19A1P41440 591 aa27.92■■■□□ 2.06
CTDNEP1-208ENST00000573600 FZD2Q14332 565 aa27.92■■■□□ 2.06
CTDNEP1-208ENST00000573600 CAMKMTQ7Z624 323 aa27.92■■■□□ 2.06
CTDNEP1-208ENST00000573600 ANKRD53Q8N9V6 530 aa27.92■■■□□ 2.06
CTDNEP1-208ENST00000573600 CADM4Q8NFZ8 388 aa27.92■■■□□ 2.06
CTDNEP1-208ENST00000573600 NRG4Q8WWG1 115 aa27.92■■■□□ 2.06
CTDNEP1-208ENST00000573600 NELL1Q92832 810 aa27.92■■■□□ 2.06
CTDNEP1-208ENST00000573600 MS4A8Q9BY19 250 aa27.92■■■□□ 2.06
CTDNEP1-208ENST00000573600 TRIM8Q9BZR9 551 aa27.92■■■□□ 2.06
CTDNEP1-208ENST00000573600 SERHLQ9NQF3 203 aa27.92■■■□□ 2.06
CTDNEP1-208ENST00000573600 AASDHPPTQ9NRN7 309 aa27.92■■■□□ 2.06
CTDNEP1-208ENST00000573600 TCRBV3S1A0A5B6 114 aa27.92■■■□□ 2.06
CTDNEP1-208ENST00000573600 METTL12A8MUP2 240 aa27.92■■■□□ 2.06
CTDNEP1-208ENST00000573600 DFNA5O60443 496 aa27.92■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms