RNA–Protein interactions for RNA: ENST00000573100.1

SMIM28-201, Transcript of small integral membrane protein 28, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMIM28, Length 855 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28-201ENST00000573100 HRH3Q9Y5N1 445 aa11.56□□□□□ -0.56
SMIM28-201ENST00000573100 NSD1Q96L73 2696 aaPredicted RBP11.55□□□□□ -0.56
SMIM28-201ENST00000573100 IGKV1-8A0A0C4DH67 115 aa11.55□□□□□ -0.56
SMIM28-201ENST00000573100 GOLGA6L19H0YKK7 550 aa11.55□□□□□ -0.56
SMIM28-201ENST00000573100 NDC80O14777 642 aa11.55□□□□□ -0.56
SMIM28-201ENST00000573100 TJP3O95049 919 aa11.55□□□□□ -0.56
SMIM28-201ENST00000573100 TPM3P06753 285 aa11.55□□□□□ -0.56
SMIM28-201ENST00000573100 EZRP15311 586 aaKnown RBP11.55□□□□□ -0.56
SMIM28-201ENST00000573100 XCR1P46094 333 aa11.55□□□□□ -0.56
SMIM28-201ENST00000573100 PRAMEP78395 509 aa11.55□□□□□ -0.56
SMIM28-201ENST00000573100 PRDX1Q06830 199 aaKnown RBP11.55□□□□□ -0.56
SMIM28-201ENST00000573100 CDH17Q12864 832 aa11.55□□□□□ -0.56
SMIM28-201ENST00000573100 ANKRD20A4Q4UJ75 823 aa11.55□□□□□ -0.56
SMIM28-201ENST00000573100 ZNF468Q5VIY5 522 aaPredicted RBP11.55□□□□□ -0.56
SMIM28-201ENST00000573100 ZNF425Q6IV72 752 aa11.55□□□□□ -0.56
SMIM28-201ENST00000573100 RPS19BP1Q86WX3 136 aaKnown RBP11.55□□□□□ -0.56
SMIM28-201ENST00000573100 CCDC71Q8IV32 467 aaPredicted RBP11.55□□□□□ -0.56
SMIM28-201ENST00000573100 CLYBLQ8N0X4 340 aa11.55□□□□□ -0.56
SMIM28-201ENST00000573100 POGLUT1Q8NBL1 392 aa11.55□□□□□ -0.56
SMIM28-201ENST00000573100 OR9A1PQ8NGU1 263 aa11.55□□□□□ -0.56
SMIM28-201ENST00000573100 MCOLN3Q8TDD5 553 aa11.55□□□□□ -0.56
SMIM28-201ENST00000573100 LPAR4Q99677 370 aa11.55□□□□□ -0.56
SMIM28-201ENST00000573100 TP63Q9H3D4 680 aaPredicted RBP11.55□□□□□ -0.56
SMIM28-201ENST00000573100 ABHD10Q9NUJ1 306 aa11.55□□□□□ -0.56
SMIM28-201ENST00000573100 PCYOX1Q9UHG3 505 aa11.55□□□□□ -0.56
SMIM28-201ENST00000573100 RPH3AQ9Y2J0 694 aaPredicted RBP11.55□□□□□ -0.56
SMIM28-201ENST00000573100 R3HDM2Q9Y2K5 976 aaKnown RBP11.55□□□□□ -0.56
SMIM28-201ENST00000573100 HCFC1P51610 2035 aa11.55□□□□□ -0.56
SMIM28-201ENST00000573100 HEATR5BQ9P2D3 2071 aa11.55□□□□□ -0.56
SMIM28-201ENST00000573100 DNAJC13O75165 2243 aa11.54□□□□□ -0.56
SMIM28-201ENST00000573100 TFECO14948 347 aaPredicted RBP11.54□□□□□ -0.56
SMIM28-201ENST00000573100 P2RX6O15547 441 aa11.54□□□□□ -0.56
SMIM28-201ENST00000573100 PRMT3O60678 531 aa11.54□□□□□ -0.56
SMIM28-201ENST00000573100 CCNDBP1O95273 360 aa11.54□□□□□ -0.56
SMIM28-201ENST00000573100 NSA2O95478 260 aaKnown RBP11.54□□□□□ -0.56
SMIM28-201ENST00000573100 ADRA1DP25100 572 aa11.54□□□□□ -0.56
SMIM28-201ENST00000573100 PTPN7P35236 360 aa11.54□□□□□ -0.56
SMIM28-201ENST00000573100 CETN2P41208 172 aa11.54□□□□□ -0.56
SMIM28-201ENST00000573100 MAGEA1P43355 309 aa11.54□□□□□ -0.56
SMIM28-201ENST00000573100 CYB561P49447 251 aa11.54□□□□□ -0.56
SMIM28-201ENST00000573100 TTPAP49638 278 aa11.54□□□□□ -0.56
SMIM28-201ENST00000573100 ACVR1Q04771 509 aa11.54□□□□□ -0.56
SMIM28-201ENST00000573100 PMPCAQ10713 525 aa11.54□□□□□ -0.56
SMIM28-201ENST00000573100 TRIM14Q14142 442 aa11.54□□□□□ -0.56
SMIM28-201ENST00000573100 ARHGAP19Q14CB8 494 aa11.54□□□□□ -0.56
SMIM28-201ENST00000573100 NSDHLQ15738 373 aa11.54□□□□□ -0.56
SMIM28-201ENST00000573100 CEBPEQ15744 281 aa11.54□□□□□ -0.56
SMIM28-201ENST00000573100 SFT2D3Q587I9 215 aa11.54□□□□□ -0.56
SMIM28-201ENST00000573100 ICE2Q659A1 982 aa11.54□□□□□ -0.56
SMIM28-201ENST00000573100 C11orf63Q6NUN7 778 aa11.54□□□□□ -0.56
SMIM28-201ENST00000573100 PAPD4Q6PIY7 484 aaKnown RBP11.54□□□□□ -0.56
SMIM28-201ENST00000573100 ADCK2Q7Z695 626 aa11.54□□□□□ -0.56
SMIM28-201ENST00000573100 SHISA5Q8N114 240 aa11.54□□□□□ -0.56
SMIM28-201ENST00000573100 TMEM125Q96AQ2 219 aa11.54□□□□□ -0.56
SMIM28-201ENST00000573100 ZNF778Q96MU6 729 aa11.54□□□□□ -0.56
SMIM28-201ENST00000573100 DLL4Q9NR61 685 aa11.54□□□□□ -0.56
SMIM28-201ENST00000573100 HCN3Q9P1Z3 774 aa11.54□□□□□ -0.56
SMIM28-201ENST00000573100 TAC3Q9UHF0 121 aa11.54□□□□□ -0.56
SMIM28-201ENST00000573100 ST6GALNAC2Q9UJ37 374 aa11.54□□□□□ -0.56
SMIM28-201ENST00000573100 EDARQ9UNE0 448 aa11.54□□□□□ -0.56
SMIM28-201ENST00000573100 PCDHA3Q9Y5H8 950 aa11.54□□□□□ -0.56
SMIM28-201ENST00000573100 VPS13CQ709C8 3753 aa11.53□□□□□ -0.56
SMIM28-201ENST00000573100 CD3EAPO15446 510 aaKnown RBP11.53□□□□□ -0.56
SMIM28-201ENST00000573100 CDC40O60508 579 aaKnown RBP eCLIP11.53□□□□□ -0.56
SMIM28-201ENST00000573100 CTAG2O75638 210 aa11.53□□□□□ -0.56
SMIM28-201ENST00000573100 MATN4O95460 622 aa11.53□□□□□ -0.56
SMIM28-201ENST00000573100 TPM1P09493 284 aa11.53□□□□□ -0.56
SMIM28-201ENST00000573100 ERGP11308 486 aa11.53□□□□□ -0.56
SMIM28-201ENST00000573100 CTNNA1P35221 906 aaKnown RBP11.53□□□□□ -0.56
SMIM28-201ENST00000573100 HSD17B2P37059 387 aa11.53□□□□□ -0.56
SMIM28-201ENST00000573100 BCL6P41182 706 aa11.53□□□□□ -0.56
SMIM28-201ENST00000573100 SNRPNP63162 240 aaKnown RBP11.53□□□□□ -0.56
SMIM28-201ENST00000573100 ABATP80404 500 aa11.53□□□□□ -0.56
SMIM28-201ENST00000573100 LTBQ06643 244 aa11.53□□□□□ -0.56
SMIM28-201ENST00000573100 ACAD11Q709F0 780 aa11.53□□□□□ -0.56
SMIM28-201ENST00000573100 PCGF5Q86SE9 256 aa11.53□□□□□ -0.56
SMIM28-201ENST00000573100 LRRC6Q86X45 466 aa11.53□□□□□ -0.56
SMIM28-201ENST00000573100 PLD3Q8IV08 490 aa11.53□□□□□ -0.56
SMIM28-201ENST00000573100 PLPP5Q8NEB5 264 aa11.53□□□□□ -0.56
SMIM28-201ENST00000573100 POLDIP3Q9BY77 421 aaKnown RBP11.53□□□□□ -0.56
SMIM28-201ENST00000573100 P2RY12Q9H244 342 aa11.53□□□□□ -0.56
SMIM28-201ENST00000573100 LIME1Q9H400 295 aa11.53□□□□□ -0.56
SMIM28-201ENST00000573100 TRIM45Q9H8W5 580 aaPredicted RBP11.53□□□□□ -0.56
SMIM28-201ENST00000573100 CATSPERZQ9NTU4 200 aa11.53□□□□□ -0.56
SMIM28-201ENST00000573100 MARCH4Q9P2E8 410 aaPredicted RBP11.53□□□□□ -0.56
SMIM28-201ENST00000573100 TSR3Q9UJK0 312 aaKnown RBP11.53□□□□□ -0.56
SMIM28-201ENST00000573100 FAM237BA0A1B0GVD1 139 aa11.52□□□□□ -0.57
SMIM28-201ENST00000573100 ZNF839A8K0R7 811 aa11.52□□□□□ -0.57
SMIM28-201ENST00000573100 ERI2A8K979 691 aaKnown RBP11.52□□□□□ -0.57
SMIM28-201ENST00000573100 KLRC4-KLRK1H3BQV0 150 aa11.52□□□□□ -0.57
SMIM28-201ENST00000573100 SGK494L7N484 410 aa11.52□□□□□ -0.57
SMIM28-201ENST00000573100 MYO1CO00159 1063 aa11.52□□□□□ -0.57
SMIM28-201ENST00000573100 HS6ST1O60243 411 aa11.52□□□□□ -0.57
SMIM28-201ENST00000573100 KLK8O60259 260 aa11.52□□□□□ -0.57
SMIM28-201ENST00000573100 NDUFS3O75489 264 aa11.52□□□□□ -0.57
SMIM28-201ENST00000573100 STATHP02808 62 aa11.52□□□□□ -0.57
SMIM28-201ENST00000573100 PTMAP06454 111 aaKnown RBP11.52□□□□□ -0.57
SMIM28-201ENST00000573100 TFEBP19484 476 aa11.52□□□□□ -0.57
SMIM28-201ENST00000573100 DNASE1P24855 282 aa11.52□□□□□ -0.57
SMIM28-201ENST00000573100 TPP2P29144 1249 aaPredicted RBP11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms