RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 SP1P08047 785 aa18.7■□□□□ 0.58
CCDC40-206ENST00000572083 IL1RNP18510 177 aa18.7■□□□□ 0.58
CCDC40-206ENST00000572083 FMO4P31512 558 aa18.7■□□□□ 0.58
CCDC40-206ENST00000572083 FDFT1P37268 417 aa18.7■□□□□ 0.58
CCDC40-206ENST00000572083 PNLIPRP1P54315 467 aa18.7■□□□□ 0.58
CCDC40-206ENST00000572083 CRADDP78560 199 aa18.7■□□□□ 0.58
CCDC40-206ENST00000572083 GBX1Q14549 363 aa18.7■□□□□ 0.58
CCDC40-206ENST00000572083 EXT1Q16394 746 aa18.7■□□□□ 0.58
CCDC40-206ENST00000572083 MAPKAPK3Q16644 382 aa18.7■□□□□ 0.58
CCDC40-206ENST00000572083 SLC25A25Q6KCM7 469 aa18.7■□□□□ 0.58
CCDC40-206ENST00000572083 PRUNE1Q86TP1 453 aa18.7■□□□□ 0.58
CCDC40-206ENST00000572083 LRRC57Q8N9N7 239 aa18.7■□□□□ 0.58
CCDC40-206ENST00000572083 BIRC8Q96P09 236 aa18.7■□□□□ 0.58
CCDC40-206ENST00000572083 PKP4Q99569 1192 aa18.7■□□□□ 0.58
CCDC40-206ENST00000572083 MMP25Q9NPA2 562 aa18.7■□□□□ 0.58
CCDC40-206ENST00000572083 DNHD1Q96M86 4753 aa18.69■□□□□ 0.58
CCDC40-206ENST00000572083 GRID2IPA4D2P6 1211 aa18.69■□□□□ 0.58
CCDC40-206ENST00000572083 NSA2O95478 260 aaKnown RBP18.69■□□□□ 0.58
CCDC40-206ENST00000572083 CYC1P08574 325 aa18.69■□□□□ 0.58
CCDC40-206ENST00000572083 PTGER1P34995 402 aa18.69■□□□□ 0.58
CCDC40-206ENST00000572083 CYLC1P35663 651 aaPredicted RBP18.69■□□□□ 0.58
CCDC40-206ENST00000572083 AGTR2P50052 363 aa18.69■□□□□ 0.58
CCDC40-206ENST00000572083 PTK6Q13882 451 aa18.69■□□□□ 0.58
CCDC40-206ENST00000572083 ZNF468Q5VIY5 522 aaPredicted RBP18.69■□□□□ 0.58
CCDC40-206ENST00000572083 PAPD4Q6PIY7 484 aaKnown RBP18.69■□□□□ 0.58
CCDC40-206ENST00000572083 CCDC170Q8IYT3 715 aa18.69■□□□□ 0.58
CCDC40-206ENST00000572083 EID3Q8N140 333 aa18.69■□□□□ 0.58
CCDC40-206ENST00000572083 MPP5Q8N3R9 675 aa18.69■□□□□ 0.58
CCDC40-206ENST00000572083 SLC5A8Q8N695 610 aa18.69■□□□□ 0.58
CCDC40-206ENST00000572083 HORMAD2Q8N7B1 307 aa18.69■□□□□ 0.58
CCDC40-206ENST00000572083 M1APQ8TC57 530 aa18.69■□□□□ 0.58
CCDC40-206ENST00000572083 MACROD1Q9BQ69 325 aa18.69■□□□□ 0.58
CCDC40-206ENST00000572083 RBCK1Q9BYM8 510 aa18.69■□□□□ 0.58
CCDC40-206ENST00000572083 RAB6BQ9NRW1 208 aa18.69■□□□□ 0.58
CCDC40-206ENST00000572083 LRFN1Q9P244 771 aa18.69■□□□□ 0.58
CCDC40-206ENST00000572083 GALPQ9UBC7 116 aa18.69■□□□□ 0.58
CCDC40-206ENST00000572083 VPS13CQ709C8 3753 aa18.69■□□□□ 0.58
CCDC40-206ENST00000572083 MAP1AP78559 2803 aaPredicted RBP18.69■□□□□ 0.58
CCDC40-206ENST00000572083 NAV3Q8IVL0 2385 aa18.68■□□□□ 0.58
CCDC40-206ENST00000572083 SGK494L7N484 410 aa18.68■□□□□ 0.58
CCDC40-206ENST00000572083 SMAPO00193 183 aa18.68■□□□□ 0.58
CCDC40-206ENST00000572083 PSIP1O75475 530 aaKnown RBP18.68■□□□□ 0.58
CCDC40-206ENST00000572083 SLC25A12O75746 678 aa18.68■□□□□ 0.58
CCDC40-206ENST00000572083 CDC123O75794 336 aaPredicted RBP18.68■□□□□ 0.58
CCDC40-206ENST00000572083 SLC16A8O95907 504 aa18.68■□□□□ 0.58
CCDC40-206ENST00000572083 APRTP07741 180 aa18.68■□□□□ 0.58
CCDC40-206ENST00000572083 IGFBP2P18065 325 aa18.68■□□□□ 0.58
CCDC40-206ENST00000572083 ATP5DP30049 168 aa18.68■□□□□ 0.58
CCDC40-206ENST00000572083 SESN2P58004 480 aaPredicted RBP18.68■□□□□ 0.58
CCDC40-206ENST00000572083 KCNJ11Q14654 390 aa18.68■□□□□ 0.58
CCDC40-206ENST00000572083 ARHGAP19Q14CB8 494 aa18.68■□□□□ 0.58
CCDC40-206ENST00000572083 KLHL38Q2WGJ6 581 aa18.68■□□□□ 0.58
CCDC40-206ENST00000572083 SFT2D3Q587I9 215 aa18.68■□□□□ 0.58
CCDC40-206ENST00000572083 ACSBG2Q5FVE4 666 aa18.68■□□□□ 0.58
CCDC40-206ENST00000572083 CEP128Q6ZU80 1094 aa18.68■□□□□ 0.58
CCDC40-206ENST00000572083 VN1R4Q7Z5H5 301 aa18.68■□□□□ 0.58
CCDC40-206ENST00000572083 CD163Q86VB7 1156 aa18.68■□□□□ 0.58
CCDC40-206ENST00000572083 TMEM200AQ86VY9 491 aa18.68■□□□□ 0.58
CCDC40-206ENST00000572083 ZCCHC10Q8TBK6 192 aa18.68■□□□□ 0.58
CCDC40-206ENST00000572083 ZNF480Q8WV37 535 aa18.68■□□□□ 0.58
CCDC40-206ENST00000572083 CDCP1Q9H5V8 836 aa18.68■□□□□ 0.58
CCDC40-206ENST00000572083 NPDC1Q9NQX5 325 aaPredicted RBP18.68■□□□□ 0.58
CCDC40-206ENST00000572083 FAM114A2Q9NRY5 505 aa18.68■□□□□ 0.58
CCDC40-206ENST00000572083 TREX1Q9NSU2 369 aa18.68■□□□□ 0.58
CCDC40-206ENST00000572083 NKX2-6A6NCS4 301 aa18.67■□□□□ 0.58
CCDC40-206ENST00000572083 FAM90A27PA6NNH2 459 aa18.67■□□□□ 0.58
CCDC40-206ENST00000572083 GOLGA8KD6RF30 607 aa18.67■□□□□ 0.58
CCDC40-206ENST00000572083 E7ENX8 843 aa18.67■□□□□ 0.58
CCDC40-206ENST00000572083 GOLGA8TH3BQL2 631 aa18.67■□□□□ 0.58
CCDC40-206ENST00000572083 H7BY64 318 aa18.67■□□□□ 0.58
CCDC40-206ENST00000572083 NME2P1O60361 137 aa18.67■□□□□ 0.58
CCDC40-206ENST00000572083 CATP04040 527 aaKnown RBP18.67■□□□□ 0.58
CCDC40-206ENST00000572083 ETS1P14921 441 aa18.67■□□□□ 0.58
CCDC40-206ENST00000572083 NME2P22392 152 aa18.67■□□□□ 0.58
CCDC40-206ENST00000572083 NMBRP28336 390 aa18.67■□□□□ 0.58
CCDC40-206ENST00000572083 TAP2Q03519 686 aa18.67■□□□□ 0.58
CCDC40-206ENST00000572083 RELAQ04206 551 aa18.67■□□□□ 0.58
CCDC40-206ENST00000572083 ABRAXAS2Q15018 415 aa18.67■□□□□ 0.58
CCDC40-206ENST00000572083 PCID2Q5JVF3 399 aa18.67■□□□□ 0.58
CCDC40-206ENST00000572083 THEMIS2Q5TEJ8 643 aa18.67■□□□□ 0.58
CCDC40-206ENST00000572083 MARVELD2Q8N4S9 558 aa18.67■□□□□ 0.58
CCDC40-206ENST00000572083 UBL4BQ8N7F7 174 aa18.67■□□□□ 0.58
CCDC40-206ENST00000572083 MCOLN3Q8TDD5 553 aa18.67■□□□□ 0.58
CCDC40-206ENST00000572083 LPGAT1Q92604 370 aa18.67■□□□□ 0.58
CCDC40-206ENST00000572083 NRGNQ92686 78 aa18.67■□□□□ 0.58
CCDC40-206ENST00000572083 TSLPQ969D9 159 aa18.67■□□□□ 0.58
CCDC40-206ENST00000572083 CALR3Q96L12 384 aaKnown RBP18.67■□□□□ 0.58
CCDC40-206ENST00000572083 PRAP1Q96NZ9 151 aa18.67■□□□□ 0.58
CCDC40-206ENST00000572083 LACRTQ9GZZ8 138 aa18.67■□□□□ 0.58
CCDC40-206ENST00000572083 TNFRSF10DQ9UBN6 386 aa18.67■□□□□ 0.58
CCDC40-206ENST00000572083 AMFRQ9UKV5 643 aa18.67■□□□□ 0.58
CCDC40-206ENST00000572083 ZNF839A8K0R7 811 aa18.66■□□□□ 0.58
CCDC40-206ENST00000572083 NDC80O14777 642 aa18.66■□□□□ 0.58
CCDC40-206ENST00000572083 RDH16O75452 317 aa18.66■□□□□ 0.58
CCDC40-206ENST00000572083 SYF2O95926 243 aaKnown RBP18.66■□□□□ 0.58
CCDC40-206ENST00000572083 TPOP07202 933 aa18.66■□□□□ 0.58
CCDC40-206ENST00000572083 CD99P14209 185 aa18.66■□□□□ 0.58
CCDC40-206ENST00000572083 HOXB4P17483 251 aaPredicted RBP18.66■□□□□ 0.58
CCDC40-206ENST00000572083 CHRM3P20309 590 aa18.66■□□□□ 0.58
CCDC40-206ENST00000572083 ARNTP27540 789 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms