RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 SOX11P35716 441 aa16.2■□□□□ 0.18
MAP1LC3B-208ENST00000570189 AVPR1BP47901 424 aa16.2■□□□□ 0.18
MAP1LC3B-208ENST00000570189 AP2B1P63010 937 aa16.2■□□□□ 0.18
MAP1LC3B-208ENST00000570189 MFAP5Q13361 173 aa16.2■□□□□ 0.18
MAP1LC3B-208ENST00000570189 FHL5Q5TD97 284 aa16.2■□□□□ 0.18
MAP1LC3B-208ENST00000570189 CAPN13Q6MZZ7 669 aaPredicted RBP16.2■□□□□ 0.18
MAP1LC3B-208ENST00000570189 ISLR2Q6UXK2 745 aa16.2■□□□□ 0.18
MAP1LC3B-208ENST00000570189 MBOAT1Q6ZNC8 495 aa16.2■□□□□ 0.18
MAP1LC3B-208ENST00000570189 PLD3Q8IV08 490 aa16.2■□□□□ 0.18
MAP1LC3B-208ENST00000570189 KBTBD2Q8IY47 623 aa16.2■□□□□ 0.18
MAP1LC3B-208ENST00000570189 THOC3Q96J01 351 aaKnown RBP16.2■□□□□ 0.18
MAP1LC3B-208ENST00000570189 OLFM1Q99784 485 aa16.2■□□□□ 0.18
MAP1LC3B-208ENST00000570189 TRIM51Q9BSJ1 452 aa16.2■□□□□ 0.18
MAP1LC3B-208ENST00000570189 ZNF700Q9H0M5 742 aa16.2■□□□□ 0.18
MAP1LC3B-208ENST00000570189 EPS8L2Q9H6S3 715 aa16.2■□□□□ 0.18
MAP1LC3B-208ENST00000570189 RIC8BQ9NVN3 520 aa16.2■□□□□ 0.18
MAP1LC3B-208ENST00000570189 NSMCE4AQ9NXX6 385 aa16.2■□□□□ 0.18
MAP1LC3B-208ENST00000570189 LUZP4Q9P127 313 aa16.2■□□□□ 0.18
MAP1LC3B-208ENST00000570189 ZFATQ9P243 1243 aa16.2■□□□□ 0.18
MAP1LC3B-208ENST00000570189 SH2B3Q9UQQ2 575 aa16.2■□□□□ 0.18
MAP1LC3B-208ENST00000570189 SLC22A7Q9Y694 548 aa16.2■□□□□ 0.18
MAP1LC3B-208ENST00000570189 ICE1Q9Y2F5 2266 aa16.2■□□□□ 0.18
MAP1LC3B-208ENST00000570189 NAV2Q8IVL1 2488 aa16.2■□□□□ 0.18
MAP1LC3B-208ENST00000570189 NSG1A0A0A6YYJ2 146 aa16.19■□□□□ 0.18
MAP1LC3B-208ENST00000570189 ALOX12BO75342 701 aa16.19■□□□□ 0.18
MAP1LC3B-208ENST00000570189 CBX6O95503 412 aa16.19■□□□□ 0.18
MAP1LC3B-208ENST00000570189 SERPINA7P05543 415 aa16.19■□□□□ 0.18
MAP1LC3B-208ENST00000570189 PRR35P0CG20 571 aa16.19■□□□□ 0.18
MAP1LC3B-208ENST00000570189 GP1BBP13224 206 aa16.19■□□□□ 0.18
MAP1LC3B-208ENST00000570189 ZNF37AP17032 561 aaPredicted RBP16.19■□□□□ 0.18
MAP1LC3B-208ENST00000570189 CXCR2P25025 360 aa16.19■□□□□ 0.18
MAP1LC3B-208ENST00000570189 GRK3P35626 688 aa16.19■□□□□ 0.18
MAP1LC3B-208ENST00000570189 CDKL1Q00532 357 aa16.19■□□□□ 0.18
MAP1LC3B-208ENST00000570189 MGAT5Q09328 741 aa16.19■□□□□ 0.18
MAP1LC3B-208ENST00000570189 NAE1Q13564 534 aa16.19■□□□□ 0.18
MAP1LC3B-208ENST00000570189 PPP1R3AQ16821 1122 aa16.19■□□□□ 0.18
MAP1LC3B-208ENST00000570189 RPUSD3Q6P087 351 aaKnown RBP16.19■□□□□ 0.18
MAP1LC3B-208ENST00000570189 SBSNQ6UWP8 590 aa16.19■□□□□ 0.18
MAP1LC3B-208ENST00000570189 ZC3HC1Q86WB0 502 aaKnown RBP16.19■□□□□ 0.18
MAP1LC3B-208ENST00000570189 PARP9Q8IXQ6 854 aa16.19■□□□□ 0.18
MAP1LC3B-208ENST00000570189 GPATCH11Q8N954 259 aa16.19■□□□□ 0.18
MAP1LC3B-208ENST00000570189 BBOF1Q8ND07 529 aa16.19■□□□□ 0.18
MAP1LC3B-208ENST00000570189 PSMF1Q92530 271 aa16.19■□□□□ 0.18
MAP1LC3B-208ENST00000570189 CFAP36Q96G28 342 aa16.19■□□□□ 0.18
MAP1LC3B-208ENST00000570189 PWWP2AQ96N64 755 aa16.19■□□□□ 0.18
MAP1LC3B-208ENST00000570189 MESP1Q9BRJ9 268 aa16.19■□□□□ 0.18
MAP1LC3B-208ENST00000570189 TRIM54Q9BYV2 358 aa16.19■□□□□ 0.18
MAP1LC3B-208ENST00000570189 ATG10Q9H0Y0 220 aa16.19■□□□□ 0.18
MAP1LC3B-208ENST00000570189 ZNF160Q9HCG1 818 aa16.19■□□□□ 0.18
MAP1LC3B-208ENST00000570189 PPANQ9NQ55 473 aaKnown RBP16.19■□□□□ 0.18
MAP1LC3B-208ENST00000570189 ASF1BQ9NVP2 202 aa16.19■□□□□ 0.18
MAP1LC3B-208ENST00000570189 ARL15Q9NXU5 204 aa16.19■□□□□ 0.18
MAP1LC3B-208ENST00000570189 SLC17A6Q9P2U8 582 aa16.19■□□□□ 0.18
MAP1LC3B-208ENST00000570189 MRPS2Q9Y399 296 aaKnown RBP16.19■□□□□ 0.18
MAP1LC3B-208ENST00000570189 EFCAB8A8MWE9 144 aa16.18■□□□□ 0.18
MAP1LC3B-208ENST00000570189 HEXBP07686 556 aa16.18■□□□□ 0.18
MAP1LC3B-208ENST00000570189 ICAM2P13598 275 aa16.18■□□□□ 0.18
MAP1LC3B-208ENST00000570189 IL10P22301 178 aa16.18■□□□□ 0.18
MAP1LC3B-208ENST00000570189 BCL6P41182 706 aa16.18■□□□□ 0.18
MAP1LC3B-208ENST00000570189 RPL21P46778 160 aaKnown RBP16.18■□□□□ 0.18
MAP1LC3B-208ENST00000570189 PCOLCEQ15113 449 aa16.18■□□□□ 0.18
MAP1LC3B-208ENST00000570189 TLR1Q15399 786 aa16.18■□□□□ 0.18
MAP1LC3B-208ENST00000570189 CYS1Q717R9 158 aa16.18■□□□□ 0.18
MAP1LC3B-208ENST00000570189 ASPGQ86U10 573 aa16.18■□□□□ 0.18
MAP1LC3B-208ENST00000570189 MFSD9Q8NBP5 474 aa16.18■□□□□ 0.18
MAP1LC3B-208ENST00000570189 FBXO36Q8NEA4 188 aa16.18■□□□□ 0.18
MAP1LC3B-208ENST00000570189 C8orf44Q96CB5 159 aa16.18■□□□□ 0.18
MAP1LC3B-208ENST00000570189 C19orf60Q96EN9 201 aa16.18■□□□□ 0.18
MAP1LC3B-208ENST00000570189 OR4K3Q96R72 315 aa16.18■□□□□ 0.18
MAP1LC3B-208ENST00000570189 TUBB6Q9BUF5 446 aa16.18■□□□□ 0.18
MAP1LC3B-208ENST00000570189 PHACTR1Q9C0D0 580 aa16.18■□□□□ 0.18
MAP1LC3B-208ENST00000570189 RNF32Q9H0A6 362 aa16.18■□□□□ 0.18
MAP1LC3B-208ENST00000570189 POPDC3Q9HBV1 291 aa16.18■□□□□ 0.18
MAP1LC3B-208ENST00000570189 PYCARDQ9ULZ3 195 aa16.18■□□□□ 0.18
MAP1LC3B-208ENST00000570189 PSAT1Q9Y617 370 aa16.18■□□□□ 0.18
MAP1LC3B-208ENST00000570189 DOPEY1Q5JWR5 2465 aa16.17■□□□□ 0.18
MAP1LC3B-208ENST00000570189 TRBC2A0A5B9 178 aa16.17■□□□□ 0.18
MAP1LC3B-208ENST00000570189 PABPN1LA6NDY0 278 aaKnown RBP16.17■□□□□ 0.18
MAP1LC3B-208ENST00000570189 LCMT2O60294 686 aaKnown RBP16.17■□□□□ 0.18
MAP1LC3B-208ENST00000570189 SLC35G6P0C7Q6 338 aa16.17■□□□□ 0.18
MAP1LC3B-208ENST00000570189 CDH1P12830 882 aa16.17■□□□□ 0.18
MAP1LC3B-208ENST00000570189 CCR8P51685 355 aa16.17■□□□□ 0.18
MAP1LC3B-208ENST00000570189 EFNA3P52797 238 aa16.17■□□□□ 0.18
MAP1LC3B-208ENST00000570189 SNRPNP63162 240 aaKnown RBP16.17■□□□□ 0.18
MAP1LC3B-208ENST00000570189 PDIA2Q13087 525 aaKnown RBP16.17■□□□□ 0.18
MAP1LC3B-208ENST00000570189 PWP1Q13610 501 aa16.17■□□□□ 0.18
MAP1LC3B-208ENST00000570189 ZNF169Q14929 603 aaPredicted RBP16.17■□□□□ 0.18
MAP1LC3B-208ENST00000570189 HP1BP3Q5SSJ5 553 aaPredicted RBP16.17■□□□□ 0.18
MAP1LC3B-208ENST00000570189 NIPAL1Q6NVV3 410 aa16.17■□□□□ 0.18
MAP1LC3B-208ENST00000570189 TMEM207Q6UWW9 146 aa16.17■□□□□ 0.18
MAP1LC3B-208ENST00000570189 PRSS58Q8IYP2 241 aa16.17■□□□□ 0.18
MAP1LC3B-208ENST00000570189 AFAP1L2Q8N4X5 818 aa16.17■□□□□ 0.18
MAP1LC3B-208ENST00000570189 NKAPQ8N5F7 415 aaKnown RBP16.17■□□□□ 0.18
MAP1LC3B-208ENST00000570189 CISD2Q8N5K1 135 aaKnown RBP16.17■□□□□ 0.18
MAP1LC3B-208ENST00000570189 OR9A4Q8NGU2 314 aa16.17■□□□□ 0.18
MAP1LC3B-208ENST00000570189 DNAJB14Q8TBM8 379 aa16.17■□□□□ 0.18
MAP1LC3B-208ENST00000570189 SLC13A3Q8WWT9 602 aa16.17■□□□□ 0.18
MAP1LC3B-208ENST00000570189 IMMP1LQ96LU5 166 aa16.17■□□□□ 0.18
MAP1LC3B-208ENST00000570189 VN1R1Q9GZP7 353 aa16.17■□□□□ 0.18
MAP1LC3B-208ENST00000570189 RHOJQ9H4E5 214 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms