RNA–Protein interactions for RNA: ENST00000569971.5

UBR1-211, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 4

Gene UBR1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-211ENST00000569971 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.53□□□□□ -1.84
UBR1-211ENST00000569971 PPP4R1Q8TF05 950 aa3.53□□□□□ -1.84
UBR1-211ENST00000569971 SLC20A1Q8WUM9 679 aa3.53□□□□□ -1.84
UBR1-211ENST00000569971 RAD54LQ92698 747 aa3.53□□□□□ -1.84
UBR1-211ENST00000569971 MTBPQ96DY7 904 aa3.53□□□□□ -1.84
UBR1-211ENST00000569971 STAMBPL1Q96FJ0 436 aa3.53□□□□□ -1.84
UBR1-211ENST00000569971 CNOT6LQ96LI5 555 aaKnown RBP3.53□□□□□ -1.84
UBR1-211ENST00000569971 MTMR9Q96QG7 549 aa3.53□□□□□ -1.84
UBR1-211ENST00000569971 TUBGCP2Q9BSJ2 902 aa3.53□□□□□ -1.84
UBR1-211ENST00000569971 TSGA10Q9BZW7 698 aa3.53□□□□□ -1.84
UBR1-211ENST00000569971 CPVLQ9H3G5 476 aa3.53□□□□□ -1.84
UBR1-211ENST00000569971 HAUS4Q9H6D7 363 aa3.53□□□□□ -1.84
UBR1-211ENST00000569971 PSTPIP2Q9H939 334 aa3.53□□□□□ -1.84
UBR1-211ENST00000569971 MRPL44Q9H9J2 332 aaKnown RBP3.53□□□□□ -1.84
UBR1-211ENST00000569971 DBNDD1Q9H9R9 158 aa3.53□□□□□ -1.84
UBR1-211ENST00000569971 CPSF3Q9UKF6 684 aaKnown RBP3.53□□□□□ -1.84
UBR1-211ENST00000569971 KCNS2Q9ULS6 477 aa3.53□□□□□ -1.84
UBR1-211ENST00000569971 ABT1Q9ULW3 272 aaKnown RBP3.53□□□□□ -1.84
UBR1-211ENST00000569971 SNX7Q9UNH6 387 aa3.53□□□□□ -1.84
UBR1-211ENST00000569971 YIPF1Q9Y548 306 aa3.53□□□□□ -1.84
UBR1-211ENST00000569971 CDK5RAP2Q96SN8 1893 aa3.53□□□□□ -1.84
UBR1-211ENST00000569971 TTC26A0AVF1 554 aa3.52□□□□□ -1.85
UBR1-211ENST00000569971 CTAGE15A4D2H0 777 aa3.52□□□□□ -1.85
UBR1-211ENST00000569971 TRIM49BA6NDI0 452 aa3.52□□□□□ -1.85
UBR1-211ENST00000569971 OR5K3A6NET4 321 aa3.52□□□□□ -1.85
UBR1-211ENST00000569971 H3BNX3 289 aa3.52□□□□□ -1.85
UBR1-211ENST00000569971 CLDN4O14493 209 aa3.52□□□□□ -1.85
UBR1-211ENST00000569971 MOCS3O95396 460 aa3.52□□□□□ -1.85
UBR1-211ENST00000569971 TDP2O95551 362 aa3.52□□□□□ -1.85
UBR1-211ENST00000569971 GLUD1P00367 558 aa3.52□□□□□ -1.85
UBR1-211ENST00000569971 CTAGE8P0CG41 777 aa3.52□□□□□ -1.85
UBR1-211ENST00000569971 PNMA6AP0CW24 399 aaPredicted RBP3.52□□□□□ -1.85
UBR1-211ENST00000569971 TGFB3P10600 412 aa3.52□□□□□ -1.85
UBR1-211ENST00000569971 GNAZP19086 355 aa3.52□□□□□ -1.85
UBR1-211ENST00000569971 PSMA3P25788 255 aa3.52□□□□□ -1.85
UBR1-211ENST00000569971 HOXA11P31270 313 aaPredicted RBP3.52□□□□□ -1.85
UBR1-211ENST00000569971 ARRB2P32121 409 aa3.52□□□□□ -1.85
UBR1-211ENST00000569971 EPS15P42566 896 aa3.52□□□□□ -1.85
UBR1-211ENST00000569971 SLC1A4P43007 532 aa3.52□□□□□ -1.85
UBR1-211ENST00000569971 PSMC4P43686 418 aa3.52□□□□□ -1.85
UBR1-211ENST00000569971 KCNJ1P48048 391 aa3.52□□□□□ -1.85
UBR1-211ENST00000569971 GLUD2P49448 558 aa3.52□□□□□ -1.85
UBR1-211ENST00000569971 ASCL1P50553 236 aa3.52□□□□□ -1.85
UBR1-211ENST00000569971 PTENP60484 403 aa3.52□□□□□ -1.85
UBR1-211ENST00000569971 SLC20A2Q08357 652 aa3.52□□□□□ -1.85
UBR1-211ENST00000569971 PNRC1Q12796 327 aaPredicted RBP3.52□□□□□ -1.85
UBR1-211ENST00000569971 KIF5AQ12840 1032 aa3.52□□□□□ -1.85
UBR1-211ENST00000569971 COASYQ13057 564 aa3.52□□□□□ -1.85
UBR1-211ENST00000569971 UBE2SQ16763 222 aa3.52□□□□□ -1.85
UBR1-211ENST00000569971 TYSND1Q2T9J0 566 aa3.52□□□□□ -1.85
UBR1-211ENST00000569971 SMU1Q2TAY7 513 aa3.52□□□□□ -1.85
UBR1-211ENST00000569971 CCDC40Q4G0X9 1142 aa3.52□□□□□ -1.85
UBR1-211ENST00000569971 ANKRD20A4Q4UJ75 823 aa3.52□□□□□ -1.85
UBR1-211ENST00000569971 TMEM35AQ53FP2 167 aa3.52□□□□□ -1.85
UBR1-211ENST00000569971 ANKRD20A8PQ5CZ79 823 aa3.52□□□□□ -1.85
UBR1-211ENST00000569971 EFHC1Q5JVL4 640 aa3.52□□□□□ -1.85
UBR1-211ENST00000569971 ANKRD20A2Q5SQ80 823 aa3.52□□□□□ -1.85
UBR1-211ENST00000569971 CCDC122Q5T0U0 273 aa3.52□□□□□ -1.85
UBR1-211ENST00000569971 ANKRD20A1Q5TYW2 823 aa3.52□□□□□ -1.85
UBR1-211ENST00000569971 ANKRD20A3Q5VUR7 823 aa3.52□□□□□ -1.85
UBR1-211ENST00000569971 SHEQ5VZ18 495 aa3.52□□□□□ -1.85
UBR1-211ENST00000569971 CENPPQ6IPU0 288 aa3.52□□□□□ -1.85
UBR1-211ENST00000569971 MFSD12Q6NUT3 480 aa3.52□□□□□ -1.85
UBR1-211ENST00000569971 PLBD1Q6P4A8 553 aa3.52□□□□□ -1.85
UBR1-211ENST00000569971 RHBDF2Q6PJF5 856 aa3.52□□□□□ -1.85
UBR1-211ENST00000569971 GBP6Q6ZN66 633 aa3.52□□□□□ -1.85
UBR1-211ENST00000569971 TMEM179Q6ZVK1 233 aa3.52□□□□□ -1.85
UBR1-211ENST00000569971 DSG4Q86SJ6 1040 aa3.52□□□□□ -1.85
UBR1-211ENST00000569971 CTAGE6Q86UF2 777 aa3.52□□□□□ -1.85
UBR1-211ENST00000569971 CTAGE4Q8IX94 777 aa3.52□□□□□ -1.85
UBR1-211ENST00000569971 ODF3L1Q8IXM7 274 aa3.52□□□□□ -1.85
UBR1-211ENST00000569971 RNF113BQ8IZP6 322 aaKnown RBP3.52□□□□□ -1.85
UBR1-211ENST00000569971 MYOCDQ8IZQ8 938 aa3.52□□□□□ -1.85
UBR1-211ENST00000569971 SYCP3Q8IZU3 236 aa3.52□□□□□ -1.85
UBR1-211ENST00000569971 C1orf87Q8N0U7 546 aa3.52□□□□□ -1.85
UBR1-211ENST00000569971 SLC35F6Q8N357 371 aa3.52□□□□□ -1.85
UBR1-211ENST00000569971 CHCHD4Q8N4Q1 142 aa3.52□□□□□ -1.85
UBR1-211ENST00000569971 CERS5Q8N5B7 392 aa3.52□□□□□ -1.85
UBR1-211ENST00000569971 NEK11Q8NG66 645 aa3.52□□□□□ -1.85
UBR1-211ENST00000569971 MGARPQ8TDB4 240 aa3.52□□□□□ -1.85
UBR1-211ENST00000569971 HEXDCQ8WVB3 486 aa3.52□□□□□ -1.85
UBR1-211ENST00000569971 NSMAFQ92636 917 aa3.52□□□□□ -1.85
UBR1-211ENST00000569971 DAZLQ92904 295 aaKnown RBP3.52□□□□□ -1.85
UBR1-211ENST00000569971 ST6GALNAC6Q969X2 333 aa3.52□□□□□ -1.85
UBR1-211ENST00000569971 MTERF3Q96E29 417 aa3.52□□□□□ -1.85
UBR1-211ENST00000569971 RPGRIP1Q96KN7 1286 aa3.52□□□□□ -1.85
UBR1-211ENST00000569971 CCDC42Q96M95 316 aa3.52□□□□□ -1.85
UBR1-211ENST00000569971 CAMK1GQ96NX5 476 aa3.52□□□□□ -1.85
UBR1-211ENST00000569971 OR1F2PQ96R84 312 aa3.52□□□□□ -1.85
UBR1-211ENST00000569971 ERGIC2Q96RQ1 377 aa3.52□□□□□ -1.85
UBR1-211ENST00000569971 PARK7Q99497 189 aaKnown RBP3.52□□□□□ -1.85
UBR1-211ENST00000569971 LMF2Q9BU23 707 aaKnown RBP3.52□□□□□ -1.85
UBR1-211ENST00000569971 MLPHQ9BV36 600 aaPredicted RBP3.52□□□□□ -1.85
UBR1-211ENST00000569971 SF3B5Q9BWJ5 86 aaKnown RBP3.52□□□□□ -1.85
UBR1-211ENST00000569971 PARD6BQ9BYG5 372 aa3.52□□□□□ -1.85
UBR1-211ENST00000569971 RETREG1Q9H6L5 497 aa3.52□□□□□ -1.85
UBR1-211ENST00000569971 TRPV4Q9HBA0 871 aa3.52□□□□□ -1.85
UBR1-211ENST00000569971 PANK4Q9NVE7 773 aa3.52□□□□□ -1.85
UBR1-211ENST00000569971 OCIAD1Q9NX40 245 aa3.52□□□□□ -1.85
UBR1-211ENST00000569971 MIOSQ9NXC5 875 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms