RNA–Protein interactions for RNA: ENST00000568881.1

NEIL1-220, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 3

Gene NEIL1, Length 587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-220ENST00000568881 SMIM24O75264 130 aa13.16□□□□□ -0.3
NEIL1-220ENST00000568881 IPO13O94829 963 aaKnown RBP13.16□□□□□ -0.3
NEIL1-220ENST00000568881 UQCRHP07919 91 aa13.16□□□□□ -0.3
NEIL1-220ENST00000568881 GFAPP14136 432 aa13.16□□□□□ -0.3
NEIL1-220ENST00000568881 ALAS2P22557 587 aa13.16□□□□□ -0.3
NEIL1-220ENST00000568881 PSMB5P28074 263 aa13.16□□□□□ -0.3
NEIL1-220ENST00000568881 CRHR1P34998 444 aa13.16□□□□□ -0.3
NEIL1-220ENST00000568881 RRADP55042 308 aa13.16□□□□□ -0.3
NEIL1-220ENST00000568881 PRDX1Q06830 199 aaKnown RBP13.16□□□□□ -0.3
NEIL1-220ENST00000568881 PTCHD3Q3KNS1 767 aa13.16□□□□□ -0.3
NEIL1-220ENST00000568881 PRAMEF17Q5VTA0 474 aa13.16□□□□□ -0.3
NEIL1-220ENST00000568881 PRAMEF13Q5VWM6 474 aa13.16□□□□□ -0.3
NEIL1-220ENST00000568881 ICE2Q659A1 982 aa13.16□□□□□ -0.3
NEIL1-220ENST00000568881 FCRL6Q6DN72 434 aa13.16□□□□□ -0.3
NEIL1-220ENST00000568881 SH2D5Q6ZV89 423 aa13.16□□□□□ -0.3
NEIL1-220ENST00000568881 SRRM1Q8IYB3 904 aaKnown RBP13.16□□□□□ -0.3
NEIL1-220ENST00000568881 LRRC56Q8IYG6 542 aaPredicted RBP13.16□□□□□ -0.3
NEIL1-220ENST00000568881 C4orf33Q8N1A6 199 aa13.16□□□□□ -0.3
NEIL1-220ENST00000568881 EXD3Q8N9H8 876 aa13.16□□□□□ -0.3
NEIL1-220ENST00000568881 C9orf43Q8TAL5 461 aaPredicted RBP13.16□□□□□ -0.3
NEIL1-220ENST00000568881 RERGQ96A58 199 aaPredicted RBP13.16□□□□□ -0.3
NEIL1-220ENST00000568881 PGM2Q96G03 612 aa13.16□□□□□ -0.3
NEIL1-220ENST00000568881 VPS50Q96JG6 964 aa13.16□□□□□ -0.3
NEIL1-220ENST00000568881 SMC6Q96SB8 1091 aa13.16□□□□□ -0.3
NEIL1-220ENST00000568881 ZFYVE21Q9BQ24 234 aa13.16□□□□□ -0.3
NEIL1-220ENST00000568881 HAUS8Q9BT25 410 aa13.16□□□□□ -0.3
NEIL1-220ENST00000568881 DPH7Q9BTV6 452 aa13.16□□□□□ -0.3
NEIL1-220ENST00000568881 SGPP1Q9BX95 441 aa13.16□□□□□ -0.3
NEIL1-220ENST00000568881 IQCGQ9H095 443 aaKnown RBP13.16□□□□□ -0.3
NEIL1-220ENST00000568881 TMEM216Q9P0N5 145 aa13.16□□□□□ -0.3
NEIL1-220ENST00000568881 CPSF2Q9P2I0 782 aaKnown RBP13.16□□□□□ -0.3
NEIL1-220ENST00000568881 XPR1Q9UBH6 696 aa13.16□□□□□ -0.3
NEIL1-220ENST00000568881 KLHL20Q9Y2M5 609 aa13.16□□□□□ -0.3
NEIL1-220ENST00000568881 HEATR5BQ9P2D3 2071 aa13.16□□□□□ -0.3
NEIL1-220ENST00000568881 MAP2K7O14733 419 aa13.15□□□□□ -0.3
NEIL1-220ENST00000568881 PRPF4O43172 522 aaKnown RBP eCLIP13.15□□□□□ -0.33e-7■■■■■ 27.4
NEIL1-220ENST00000568881 TAC1P20366 129 aa13.15□□□□□ -0.3
NEIL1-220ENST00000568881 ITGAXP20702 1163 aa13.15□□□□□ -0.3
NEIL1-220ENST00000568881 GGT5P36269 586 aa13.15□□□□□ -0.3
NEIL1-220ENST00000568881 FOLR3P41439 243 aa13.15□□□□□ -0.3
NEIL1-220ENST00000568881 SLC18A2Q05940 514 aa13.15□□□□□ -0.3
NEIL1-220ENST00000568881 NFATC3Q12968 1075 aa13.15□□□□□ -0.3
NEIL1-220ENST00000568881 NKAIN1Q4KMZ8 207 aa13.15□□□□□ -0.3
NEIL1-220ENST00000568881 C1orf189Q5VU69 101 aa13.15□□□□□ -0.3
NEIL1-220ENST00000568881 MLIPQ5VWP3 458 aa13.15□□□□□ -0.3
NEIL1-220ENST00000568881 FAM198BQ6UWH4 519 aa13.15□□□□□ -0.3
NEIL1-220ENST00000568881 LCTLQ6UWM7 567 aa13.15□□□□□ -0.3
NEIL1-220ENST00000568881 TTLL10Q6ZVT0 673 aa13.15□□□□□ -0.3
NEIL1-220ENST00000568881 RNF44Q7L0R7 432 aa13.15□□□□□ -0.3
NEIL1-220ENST00000568881 ADCK2Q7Z695 626 aa13.15□□□□□ -0.3
NEIL1-220ENST00000568881 C17orf64Q86WR6 236 aa13.15□□□□□ -0.3
NEIL1-220ENST00000568881 FAM20CQ8IXL6 584 aa13.15□□□□□ -0.3
NEIL1-220ENST00000568881 PYCR2Q96C36 320 aa13.15□□□□□ -0.3
NEIL1-220ENST00000568881 GBP5Q96PP8 586 aa13.15□□□□□ -0.3
NEIL1-220ENST00000568881 PLCD4Q9BRC7 762 aa13.15□□□□□ -0.3
NEIL1-220ENST00000568881 AKIRIN1Q9H9L7 192 aaPredicted RBP13.15□□□□□ -0.3
NEIL1-220ENST00000568881 CUTCQ9NTM9 273 aa13.15□□□□□ -0.3
NEIL1-220ENST00000568881 DHCR7Q9UBM7 475 aaKnown RBP13.15□□□□□ -0.3
NEIL1-220ENST00000568881 PTBP2Q9UKA9 531 aaKnown RBP13.15□□□□□ -0.3
NEIL1-220ENST00000568881 KCNMB2Q9Y691 235 aa13.15□□□□□ -0.3
NEIL1-220ENST00000568881 A0A0J9YVX5 310 aa13.14□□□□□ -0.31
NEIL1-220ENST00000568881 OR2A25A4D2G3 310 aa13.14□□□□□ -0.31
NEIL1-220ENST00000568881 FITM1A5D6W6 292 aa13.14□□□□□ -0.31
NEIL1-220ENST00000568881 H3BMH7 237 aa13.14□□□□□ -0.31
NEIL1-220ENST00000568881 DSCR3O14972 297 aa13.14□□□□□ -0.31
NEIL1-220ENST00000568881 TAPBPO15533 448 aa13.14□□□□□ -0.31
NEIL1-220ENST00000568881 KALRNO60229 2985 aa13.14□□□□□ -0.31
NEIL1-220ENST00000568881 KLHL41O60662 606 aa13.14□□□□□ -0.31
NEIL1-220ENST00000568881 STK16O75716 305 aa13.14□□□□□ -0.31
NEIL1-220ENST00000568881 WDR47O94967 919 aa13.14□□□□□ -0.31
NEIL1-220ENST00000568881 ALBP02768 609 aa13.14□□□□□ -0.31
NEIL1-220ENST00000568881 MTHFD2P13995 350 aa13.14□□□□□ -0.31
NEIL1-220ENST00000568881 EZRP15311 586 aaKnown RBP13.14□□□□□ -0.31
NEIL1-220ENST00000568881 NPPBP16860 134 aa13.14□□□□□ -0.31
NEIL1-220ENST00000568881 GRK3P35626 688 aa13.14□□□□□ -0.31
NEIL1-220ENST00000568881 SLC6A12P48065 614 aa13.14□□□□□ -0.31
NEIL1-220ENST00000568881 ALDH18A1P54886 795 aaKnown RBP13.14□□□□□ -0.31
NEIL1-220ENST00000568881 VSX2P58304 361 aaPredicted RBP13.14□□□□□ -0.31
NEIL1-220ENST00000568881 RPS18P62269 152 aaKnown RBP13.14□□□□□ -0.31
NEIL1-220ENST00000568881 RELAQ04206 551 aa13.14□□□□□ -0.31
NEIL1-220ENST00000568881 PFKFB4Q16877 469 aa13.14□□□□□ -0.31
NEIL1-220ENST00000568881 ZXDCQ2QGD7 858 aaPredicted RBP13.14□□□□□ -0.31
NEIL1-220ENST00000568881 MUM1Q2TAK8 710 aa13.14□□□□□ -0.31
NEIL1-220ENST00000568881 CCDC153Q494R4 210 aa13.14□□□□□ -0.31
NEIL1-220ENST00000568881 ATP1A1-AS1Q5TC04 95 aa13.14□□□□□ -0.31
NEIL1-220ENST00000568881 PRMT9Q6P2P2 845 aa13.14□□□□□ -0.31
NEIL1-220ENST00000568881 THOC6Q86W42 341 aaKnown RBP13.14□□□□□ -0.31
NEIL1-220ENST00000568881 APLFQ8IW19 511 aaPredicted RBP13.14□□□□□ -0.31
NEIL1-220ENST00000568881 KLHDC8AQ8IYD2 350 aa13.14□□□□□ -0.31
NEIL1-220ENST00000568881 FKBP10Q96AY3 582 aa13.14□□□□□ -0.31
NEIL1-220ENST00000568881 APOPT1Q96IL0 206 aa13.14□□□□□ -0.31
NEIL1-220ENST00000568881 PKNOX2Q96KN3 472 aa13.14□□□□□ -0.31
NEIL1-220ENST00000568881 CAPS2Q9BXY5 557 aa13.14□□□□□ -0.31
NEIL1-220ENST00000568881 CD244Q9BZW8 370 aa13.14□□□□□ -0.31
NEIL1-220ENST00000568881 VIPAS39Q9H9C1 493 aa13.14□□□□□ -0.31
NEIL1-220ENST00000568881 ACSS2Q9NR19 701 aa13.14□□□□□ -0.31
NEIL1-220ENST00000568881 ENAMQ9NRM1 1142 aa13.14□□□□□ -0.31
NEIL1-220ENST00000568881 STARD5Q9NSY2 213 aa13.14□□□□□ -0.31
NEIL1-220ENST00000568881 MKS1Q9NXB0 559 aa13.14□□□□□ -0.31
NEIL1-220ENST00000568881 NXT1Q9UKK6 140 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms