RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 MCCC2Q9HCC0 563 aa14.87□□□□□ -0.03
HERPUD1-215ENST00000568676 FAM227AF5H4B4 570 aa14.86□□□□□ -0.03
HERPUD1-215ENST00000568676 SMAPO00193 183 aa14.86□□□□□ -0.03
HERPUD1-215ENST00000568676 HAT1O14929 419 aa14.86□□□□□ -0.03
HERPUD1-215ENST00000568676 P2RX6O15547 441 aa14.86□□□□□ -0.03
HERPUD1-215ENST00000568676 ASNA1O43681 348 aa14.86□□□□□ -0.03
HERPUD1-215ENST00000568676 NIPSNAP2O75323 286 aa14.86□□□□□ -0.03
HERPUD1-215ENST00000568676 VAPBO95292 243 aa14.86□□□□□ -0.03
HERPUD1-215ENST00000568676 TSPAN12O95859 305 aa14.86□□□□□ -0.03
HERPUD1-215ENST00000568676 FTCDO95954 541 aa14.86□□□□□ -0.03
HERPUD1-215ENST00000568676 ABOP16442 354 aa14.86□□□□□ -0.03
HERPUD1-215ENST00000568676 NMBRP28336 390 aa14.86□□□□□ -0.03
HERPUD1-215ENST00000568676 CD96P40200 585 aa14.86□□□□□ -0.03
HERPUD1-215ENST00000568676 XCR1P46094 333 aa14.86□□□□□ -0.03
HERPUD1-215ENST00000568676 EFNA3P52797 238 aa14.86□□□□□ -0.03
HERPUD1-215ENST00000568676 TAS2R50P59544 299 aa14.86□□□□□ -0.03
HERPUD1-215ENST00000568676 MAT1AQ00266 395 aaKnown RBP14.86□□□□□ -0.03
HERPUD1-215ENST00000568676 CDK16Q00536 496 aa14.86□□□□□ -0.03
HERPUD1-215ENST00000568676 ANKRD37Q7Z713 158 aa14.86□□□□□ -0.03
HERPUD1-215ENST00000568676 CDH24Q86UP0 819 aa14.86□□□□□ -0.03
HERPUD1-215ENST00000568676 ACBD4Q8NC06 268 aa14.86□□□□□ -0.03
HERPUD1-215ENST00000568676 OR9A4Q8NGU2 314 aa14.86□□□□□ -0.03
HERPUD1-215ENST00000568676 OR51Q1Q8NH59 317 aa14.86□□□□□ -0.03
HERPUD1-215ENST00000568676 SIGLEC12Q96PQ1 595 aa14.86□□□□□ -0.03
HERPUD1-215ENST00000568676 LPAR4Q99677 370 aa14.86□□□□□ -0.03
HERPUD1-215ENST00000568676 TSGA10Q9BZW7 698 aa14.86□□□□□ -0.03
HERPUD1-215ENST00000568676 SYNPO2LQ9H987 977 aa14.86□□□□□ -0.03
HERPUD1-215ENST00000568676 TMEM184CQ9NVA4 438 aa14.86□□□□□ -0.03
HERPUD1-215ENST00000568676 INTS10Q9NVR2 710 aaKnown RBP14.86□□□□□ -0.03
HERPUD1-215ENST00000568676 NPIPA5E9PKD4 350 aa14.85□□□□□ -0.03
HERPUD1-215ENST00000568676 PRRG2O14669 202 aa14.85□□□□□ -0.03
HERPUD1-215ENST00000568676 ZBTB14O43829 449 aa14.85□□□□□ -0.03
HERPUD1-215ENST00000568676 KRT38O76015 456 aa14.85□□□□□ -0.03
HERPUD1-215ENST00000568676 ENO3P13929 434 aaPredicted RBP14.85□□□□□ -0.03
HERPUD1-215ENST00000568676 PAMP19021 973 aa14.85□□□□□ -0.03
HERPUD1-215ENST00000568676 ARNTP27540 789 aa14.85□□□□□ -0.03
HERPUD1-215ENST00000568676 BCL6P41182 706 aa14.85□□□□□ -0.03
HERPUD1-215ENST00000568676 KIR3DL1P43629 444 aa14.85□□□□□ -0.03
HERPUD1-215ENST00000568676 ACSBG2Q5FVE4 666 aa14.85□□□□□ -0.03
HERPUD1-215ENST00000568676 THEMIS2Q5TEJ8 643 aa14.85□□□□□ -0.03
HERPUD1-215ENST00000568676 RAD9BQ6WBX8 426 aa14.85□□□□□ -0.03
HERPUD1-215ENST00000568676 LANCL3Q6ZV70 420 aa14.85□□□□□ -0.03
HERPUD1-215ENST00000568676 SLC13A5Q86YT5 568 aaPredicted RBP14.85□□□□□ -0.03
HERPUD1-215ENST00000568676 CRLF3Q8IUI8 442 aa14.85□□□□□ -0.03
HERPUD1-215ENST00000568676 REXO1L1PQ8IX06 675 aa14.85□□□□□ -0.03
HERPUD1-215ENST00000568676 CAMKVQ8NCB2 501 aa14.85□□□□□ -0.03
HERPUD1-215ENST00000568676 ACRBPQ8NEB7 543 aa14.85□□□□□ -0.03
HERPUD1-215ENST00000568676 OR1F2PQ96R84 312 aa14.85□□□□□ -0.03
HERPUD1-215ENST00000568676 TREX2Q9BQ50 279 aaPredicted RBP14.85□□□□□ -0.03
HERPUD1-215ENST00000568676 PCBD2Q9H0N5 130 aa14.85□□□□□ -0.03
HERPUD1-215ENST00000568676 ANKHQ9HCJ1 492 aa14.85□□□□□ -0.03
HERPUD1-215ENST00000568676 KLHL1Q9NR64 748 aa14.85□□□□□ -0.03
HERPUD1-215ENST00000568676 COQ3Q9NZJ6 369 aa14.85□□□□□ -0.03
HERPUD1-215ENST00000568676 NPIPA1Q9UND3 350 aa14.85□□□□□ -0.03
HERPUD1-215ENST00000568676 CELSR1Q9NYQ6 3014 aa14.84□□□□□ -0.03
HERPUD1-215ENST00000568676 IGHV3-20A0A0C4DH32 117 aa14.84□□□□□ -0.03
HERPUD1-215ENST00000568676 H7BY64 318 aa14.84□□□□□ -0.03
HERPUD1-215ENST00000568676 C19orf84I3L1E1 186 aa14.84□□□□□ -0.03
HERPUD1-215ENST00000568676 SP1P08047 785 aa14.84□□□□□ -0.03
HERPUD1-215ENST00000568676 MPC1LP0DKB6 136 aa14.84□□□□□ -0.03
HERPUD1-215ENST00000568676 RPL22P35268 128 aaKnown RBP14.84□□□□□ -0.03
HERPUD1-215ENST00000568676 SKIV2L2P42285 1042 aaKnown RBP14.84□□□□□ -0.03
HERPUD1-215ENST00000568676 CRADDP78560 199 aa14.84□□□□□ -0.03
HERPUD1-215ENST00000568676 OC90Q02509 493 aaPredicted RBP14.84□□□□□ -0.03
HERPUD1-215ENST00000568676 TLE4Q04727 773 aa14.84□□□□□ -0.03
HERPUD1-215ENST00000568676 KIAA0930Q6ICG6 404 aaPredicted RBP14.84□□□□□ -0.03
HERPUD1-215ENST00000568676 SPINK14Q6IE38 97 aa14.84□□□□□ -0.03
HERPUD1-215ENST00000568676 SLC25A25Q6KCM7 469 aa14.84□□□□□ -0.03
HERPUD1-215ENST00000568676 TMEM214Q6NUQ4 689 aaKnown RBP14.84□□□□□ -0.03
HERPUD1-215ENST00000568676 NIPAL1Q6NVV3 410 aa14.84□□□□□ -0.03
HERPUD1-215ENST00000568676 DRICH1Q6PGQ1 229 aaPredicted RBP14.84□□□□□ -0.03
HERPUD1-215ENST00000568676 SIAH3Q8IW03 269 aa14.84□□□□□ -0.03
HERPUD1-215ENST00000568676 RNF10Q8N5U6 811 aaKnown RBP14.84□□□□□ -0.03
HERPUD1-215ENST00000568676 POGLUT1Q8NBL1 392 aa14.84□□□□□ -0.03
HERPUD1-215ENST00000568676 PLPP5Q8NEB5 264 aa14.84□□□□□ -0.03
HERPUD1-215ENST00000568676 AGAP11Q8TF27 550 aa14.84□□□□□ -0.03
HERPUD1-215ENST00000568676 CA5BP1Q8WTZ4 195 aa14.84□□□□□ -0.03
HERPUD1-215ENST00000568676 ASB11Q8WXH4 323 aa14.84□□□□□ -0.03
HERPUD1-215ENST00000568676 MFSD3Q96ES6 412 aa14.84□□□□□ -0.03
HERPUD1-215ENST00000568676 PRAP1Q96NZ9 151 aa14.84□□□□□ -0.03
HERPUD1-215ENST00000568676 OLFM1Q99784 485 aa14.84□□□□□ -0.03
HERPUD1-215ENST00000568676 TRIM51Q9BSJ1 452 aa14.84□□□□□ -0.03
HERPUD1-215ENST00000568676 TSR3Q9UJK0 312 aaKnown RBP14.84□□□□□ -0.03
HERPUD1-215ENST00000568676 SOX13Q9UN79 622 aa14.84□□□□□ -0.03
HERPUD1-215ENST00000568676 CRYL1Q9Y2S2 319 aa14.84□□□□□ -0.03
HERPUD1-215ENST00000568676 CCDC168Q8NDH2 2452 aa14.84□□□□□ -0.03
HERPUD1-215ENST00000568676 GABRR3A8MPY1 467 aa14.83□□□□□ -0.04
HERPUD1-215ENST00000568676 GFYI3L273 518 aa14.83□□□□□ -0.04
HERPUD1-215ENST00000568676 EIF3FO00303 357 aaPredicted RBP14.83□□□□□ -0.04
HERPUD1-215ENST00000568676 ETS1P14921 441 aa14.83□□□□□ -0.04
HERPUD1-215ENST00000568676 ZNF24P17028 368 aa14.83□□□□□ -0.04
HERPUD1-215ENST00000568676 CLCN7P51798 805 aa14.83□□□□□ -0.04
HERPUD1-215ENST00000568676 SKP1P63208 163 aa14.83□□□□□ -0.04
HERPUD1-215ENST00000568676 BASP1P80723 227 aaKnown RBP14.83□□□□□ -0.04
HERPUD1-215ENST00000568676 MEF2AQ02078 507 aaPredicted RBP14.83□□□□□ -0.04
HERPUD1-215ENST00000568676 SRSF11Q05519 484 aaKnown RBP14.83□□□□□ -0.04
HERPUD1-215ENST00000568676 ACTN3Q08043 901 aaPredicted RBP14.83□□□□□ -0.04
HERPUD1-215ENST00000568676 KCNJ11Q14654 390 aa14.83□□□□□ -0.04
HERPUD1-215ENST00000568676 RPS6KA1Q15418 735 aa14.83□□□□□ -0.04
HERPUD1-215ENST00000568676 NSDHLQ15738 373 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms