RNA–Protein interactions for RNA: ENST00000568034.1

COMMD4-222, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-222ENST00000568034 L3MBTL4Q8NA19 623 aa17.19■□□□□ 0.34
COMMD4-222ENST00000568034 OR6Y1Q8NGX8 325 aa17.19■□□□□ 0.34
COMMD4-222ENST00000568034 THAP11Q96EK4 314 aa17.19■□□□□ 0.34
COMMD4-222ENST00000568034 PKNOX2Q96KN3 472 aa17.19■□□□□ 0.34
COMMD4-222ENST00000568034 CDK15Q96Q40 435 aa17.19■□□□□ 0.34
COMMD4-222ENST00000568034 TEFMQ96QE5 360 aaKnown RBP17.19■□□□□ 0.34
COMMD4-222ENST00000568034 EFCAB11Q9BUY7 163 aa17.19■□□□□ 0.34
COMMD4-222ENST00000568034 NTMT1Q9BV86 223 aa17.19■□□□□ 0.34
COMMD4-222ENST00000568034 GATA5Q9BWX5 397 aaPredicted RBP17.19■□□□□ 0.34
COMMD4-222ENST00000568034 NT5DC2Q9H857 520 aa17.19■□□□□ 0.34
COMMD4-222ENST00000568034 ZNF490Q9ULM2 529 aaPredicted RBP17.19■□□□□ 0.34
COMMD4-222ENST00000568034 AK5Q9Y6K8 562 aa17.19■□□□□ 0.34
COMMD4-222ENST00000568034 ZSCAN9O15535 394 aaPredicted RBP17.18■□□□□ 0.34
COMMD4-222ENST00000568034 OR1F1O43749 312 aa17.18■□□□□ 0.34
COMMD4-222ENST00000568034 UGDHO60701 494 aa17.18■□□□□ 0.34
COMMD4-222ENST00000568034 TRIM13O60858 407 aa17.18■□□□□ 0.34
COMMD4-222ENST00000568034 OR2B3O76000 313 aa17.18■□□□□ 0.34
COMMD4-222ENST00000568034 MED26O95402 600 aa17.18■□□□□ 0.34
COMMD4-222ENST00000568034 DLGAP3O95886 979 aa17.18■□□□□ 0.34
COMMD4-222ENST00000568034 STATHP02808 62 aa17.18■□□□□ 0.34
COMMD4-222ENST00000568034 GRK3P35626 688 aa17.18■□□□□ 0.34
COMMD4-222ENST00000568034 CCR10P46092 362 aa17.18■□□□□ 0.34
COMMD4-222ENST00000568034 COL9A2Q14055 689 aaPredicted RBP17.18■□□□□ 0.34
COMMD4-222ENST00000568034 WASHC2DQ5SRD0 308 aa17.18■□□□□ 0.34
COMMD4-222ENST00000568034 GRHL2Q6ISB3 625 aa17.18■□□□□ 0.34
COMMD4-222ENST00000568034 FRMD7Q6ZUT3 714 aa17.18■□□□□ 0.34
COMMD4-222ENST00000568034 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.18■□□□□ 0.34
COMMD4-222ENST00000568034 CSNK1A1LQ8N752 337 aa17.18■□□□□ 0.34
COMMD4-222ENST00000568034 TRPC4APQ8TEL6 797 aa17.18■□□□□ 0.34
COMMD4-222ENST00000568034 N4BP2L2Q92802 583 aaPredicted RBP17.18■□□□□ 0.34
COMMD4-222ENST00000568034 TM4SF19Q96DZ7 209 aa17.18■□□□□ 0.34
COMMD4-222ENST00000568034 ZPBPQ9BS86 351 aa17.18■□□□□ 0.34
COMMD4-222ENST00000568034 ASPSCR1Q9BZE9 553 aa17.18■□□□□ 0.34
COMMD4-222ENST00000568034 PITHD1Q9GZP4 211 aaPredicted RBP17.18■□□□□ 0.34
COMMD4-222ENST00000568034 STARD5Q9NSY2 213 aa17.18■□□□□ 0.34
COMMD4-222ENST00000568034 SERTAD3Q9UJW9 196 aa17.18■□□□□ 0.34
COMMD4-222ENST00000568034 ACSL6Q9UKU0 697 aa17.18■□□□□ 0.34
COMMD4-222ENST00000568034 RNF11Q9Y3C5 154 aa17.18■□□□□ 0.34
COMMD4-222ENST00000568034 FER1L5A0AVI2 2057 aa17.17■□□□□ 0.34
COMMD4-222ENST00000568034 HMGB1P1B2RPK0 211 aaPredicted RBP17.17■□□□□ 0.34
COMMD4-222ENST00000568034 UBFD1O14562 309 aaKnown RBP17.17■□□□□ 0.34
COMMD4-222ENST00000568034 ZNF749O43361 778 aa17.17■□□□□ 0.34
COMMD4-222ENST00000568034 SCRG1O75711 98 aa17.17■□□□□ 0.34
COMMD4-222ENST00000568034 KIAA0754O94854 1291 aa17.17■□□□□ 0.34
COMMD4-222ENST00000568034 TBX6O95947 436 aaPredicted RBP17.17■□□□□ 0.34
COMMD4-222ENST00000568034 AHRP35869 848 aa17.17■□□□□ 0.34
COMMD4-222ENST00000568034 CCNG1P51959 295 aa17.17■□□□□ 0.34
COMMD4-222ENST00000568034 ERVPABLB-1P60509 514 aa17.17■□□□□ 0.34
COMMD4-222ENST00000568034 HKDC1Q2TB90 917 aa17.17■□□□□ 0.34
COMMD4-222ENST00000568034 TBC1D25Q3MII6 688 aa17.17■□□□□ 0.34
COMMD4-222ENST00000568034 GGTA1PQ4G0N0 100 aa17.17■□□□□ 0.34
COMMD4-222ENST00000568034 TCTE1Q5JU00 501 aa17.17■□□□□ 0.34
COMMD4-222ENST00000568034 TMEM164Q5U3C3 297 aa17.17■□□□□ 0.34
COMMD4-222ENST00000568034 LIPJQ5W064 366 aa17.17■□□□□ 0.34
COMMD4-222ENST00000568034 CES4AQ5XG92 561 aa17.17■□□□□ 0.34
COMMD4-222ENST00000568034 LETMD1Q6P1Q0 360 aa17.17■□□□□ 0.34
COMMD4-222ENST00000568034 TLDC1Q6P9B6 456 aa17.17■□□□□ 0.34
COMMD4-222ENST00000568034 TMIGD1Q6UXZ0 262 aa17.17■□□□□ 0.34
COMMD4-222ENST00000568034 ATG14Q6ZNE5 492 aa17.17■□□□□ 0.34
COMMD4-222ENST00000568034 ASPGQ86U10 573 aa17.17■□□□□ 0.34
COMMD4-222ENST00000568034 LAS2Q8IYD9 372 aa17.17■□□□□ 0.34
COMMD4-222ENST00000568034 ZNF655Q8N720 491 aaPredicted RBP17.17■□□□□ 0.34
COMMD4-222ENST00000568034 CCNYL1Q8N7R7 359 aa17.17■□□□□ 0.34
COMMD4-222ENST00000568034 ANKRD42Q8N9B4 389 aa17.17■□□□□ 0.34
COMMD4-222ENST00000568034 SLC38A9Q8NBW4 561 aa17.17■□□□□ 0.34
COMMD4-222ENST00000568034 OR4F6Q8NGB9 312 aa17.17■□□□□ 0.34
COMMD4-222ENST00000568034 MDM1Q8TC05 714 aa17.17■□□□□ 0.34
COMMD4-222ENST00000568034 CREB3L4Q8TEY5 395 aa17.17■□□□□ 0.34
COMMD4-222ENST00000568034 C10orf90Q96M02 699 aa17.17■□□□□ 0.34
COMMD4-222ENST00000568034 ZNF382Q96SR6 550 aa17.17■□□□□ 0.34
COMMD4-222ENST00000568034 AICDAQ9GZX7 198 aa17.17■□□□□ 0.34
COMMD4-222ENST00000568034 ACTR8Q9H981 624 aa17.17■□□□□ 0.34
COMMD4-222ENST00000568034 MLXIPLQ9NP71 852 aa17.17■□□□□ 0.34
COMMD4-222ENST00000568034 ZFP69BQ9UJL9 534 aa17.17■□□□□ 0.34
COMMD4-222ENST00000568034 RUVBL1Q9Y265 456 aaKnown RBP17.17■□□□□ 0.34
COMMD4-222ENST00000568034 TMEM184BQ9Y519 407 aaPredicted RBP17.17■□□□□ 0.34
COMMD4-222ENST00000568034 PCDHB3Q9Y5E6 796 aa17.17■□□□□ 0.34
COMMD4-222ENST00000568034 AP1M2Q9Y6Q5 423 aa17.17■□□□□ 0.34
COMMD4-222ENST00000568034 DYNC1I1O14576 645 aa17.16■□□□□ 0.34
COMMD4-222ENST00000568034 ATP8B1O43520 1251 aa17.16■□□□□ 0.34
COMMD4-222ENST00000568034 H2AFYO75367 372 aaKnown RBP17.16■□□□□ 0.34
COMMD4-222ENST00000568034 STK17BO94768 372 aa17.16■□□□□ 0.34
COMMD4-222ENST00000568034 EIF2S1P05198 315 aaKnown RBP17.16■□□□□ 0.34
COMMD4-222ENST00000568034 CXCR2P25025 360 aa17.16■□□□□ 0.34
COMMD4-222ENST00000568034 ARRB2P32121 409 aa17.16■□□□□ 0.34
COMMD4-222ENST00000568034 RORAP35398 523 aa17.16■□□□□ 0.34
COMMD4-222ENST00000568034 HNF4AP41235 474 aa17.16■□□□□ 0.34
COMMD4-222ENST00000568034 CYP4F2P78329 520 aa17.16■□□□□ 0.34
COMMD4-222ENST00000568034 HYAL2Q12891 473 aa17.16■□□□□ 0.34
COMMD4-222ENST00000568034 LCP2Q13094 533 aa17.16■□□□□ 0.34
COMMD4-222ENST00000568034 LAPTM5Q13571 262 aa17.16■□□□□ 0.34
COMMD4-222ENST00000568034 RBBP5Q15291 538 aaKnown RBP17.16■□□□□ 0.34
COMMD4-222ENST00000568034 RBBP7Q16576 425 aa17.16■□□□□ 0.34
COMMD4-222ENST00000568034 PAGE2BQ5JRK9 111 aa17.16■□□□□ 0.34
COMMD4-222ENST00000568034 ZCCHC23Q6ZST2 131 aa17.16■□□□□ 0.34
COMMD4-222ENST00000568034 TIPARPQ7Z3E1 657 aaKnown RBP17.16■□□□□ 0.34
COMMD4-222ENST00000568034 SYVN1Q86TM6 617 aa17.16■□□□□ 0.34
COMMD4-222ENST00000568034 TMEM126BQ8IUX1 230 aa17.16■□□□□ 0.34
COMMD4-222ENST00000568034 GPR135Q8IZ08 494 aa17.16■□□□□ 0.34
COMMD4-222ENST00000568034 KRT78Q8N1N4 520 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms