RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 CRYL1Q9Y2S2 319 aa14.61□□□□□ -0.07
PALB2-205ENST00000567003 MAP1AP78559 2803 aaPredicted RBP14.61□□□□□ -0.07
PALB2-205ENST00000567003 NAV3Q8IVL0 2385 aa14.6□□□□□ -0.07
PALB2-205ENST00000567003 ASPDHA6ND91 283 aa14.6□□□□□ -0.07
PALB2-205ENST00000567003 H7BY64 318 aa14.6□□□□□ -0.07
PALB2-205ENST00000567003 SGK494L7N484 410 aa14.6□□□□□ -0.07
PALB2-205ENST00000567003 SMAPO00193 183 aa14.6□□□□□ -0.07
PALB2-205ENST00000567003 PSIP1O75475 530 aaKnown RBP14.6□□□□□ -0.07
PALB2-205ENST00000567003 CCNDBP1O95273 360 aa14.6□□□□□ -0.07
PALB2-205ENST00000567003 SLC16A8O95907 504 aa14.6□□□□□ -0.07
PALB2-205ENST00000567003 ABOP16442 354 aa14.6□□□□□ -0.07
PALB2-205ENST00000567003 EEF1DP29692 281 aaKnown RBP14.6□□□□□ -0.07
PALB2-205ENST00000567003 XCR1P46094 333 aa14.6□□□□□ -0.07
PALB2-205ENST00000567003 CSNK1G2P78368 415 aa14.6□□□□□ -0.07
PALB2-205ENST00000567003 FAM53BQ14153 422 aa14.6□□□□□ -0.07
PALB2-205ENST00000567003 RNFT1Q5M7Z0 435 aa14.6□□□□□ -0.07
PALB2-205ENST00000567003 H3F3CQ6NXT2 135 aa14.6□□□□□ -0.07
PALB2-205ENST00000567003 SPNS3Q6ZMD2 512 aa14.6□□□□□ -0.07
PALB2-205ENST00000567003 VN1R4Q7Z5H5 301 aa14.6□□□□□ -0.07
PALB2-205ENST00000567003 FGD2Q7Z6J4 655 aa14.6□□□□□ -0.07
PALB2-205ENST00000567003 MPP5Q8N3R9 675 aa14.6□□□□□ -0.07
PALB2-205ENST00000567003 OR51Q1Q8NH59 317 aa14.6□□□□□ -0.07
PALB2-205ENST00000567003 ZCCHC10Q8TBK6 192 aa14.6□□□□□ -0.07
PALB2-205ENST00000567003 ZNF480Q8WV37 535 aa14.6□□□□□ -0.07
PALB2-205ENST00000567003 MFSD3Q96ES6 412 aa14.6□□□□□ -0.07
PALB2-205ENST00000567003 C14orf79Q96F83 325 aa14.6□□□□□ -0.07
PALB2-205ENST00000567003 CCDC138Q96M89 665 aa14.6□□□□□ -0.07
PALB2-205ENST00000567003 PRAP1Q96NZ9 151 aa14.6□□□□□ -0.07
PALB2-205ENST00000567003 TRIM51Q9BSJ1 452 aa14.6□□□□□ -0.07
PALB2-205ENST00000567003 TRIM5Q9C035 493 aa14.6□□□□□ -0.07
PALB2-205ENST00000567003 GPAMQ9HCL2 828 aa14.6□□□□□ -0.07
PALB2-205ENST00000567003 ZNF148Q9UQR1 794 aa14.6□□□□□ -0.07
PALB2-205ENST00000567003 INTS1Q8N201 2190 aaKnown RBP14.6□□□□□ -0.07
PALB2-205ENST00000567003 GABRR3A8MPY1 467 aa14.59□□□□□ -0.07
PALB2-205ENST00000567003 E7ENX8 843 aa14.59□□□□□ -0.07
PALB2-205ENST00000567003 ADAM10O14672 748 aa14.59□□□□□ -0.07
PALB2-205ENST00000567003 VAPBO95292 243 aa14.59□□□□□ -0.07
PALB2-205ENST00000567003 SYF2O95926 243 aaKnown RBP14.59□□□□□ -0.07
PALB2-205ENST00000567003 PKMP14618 531 aaKnown RBP14.59□□□□□ -0.07
PALB2-205ENST00000567003 CHRM3P20309 590 aa14.59□□□□□ -0.07
PALB2-205ENST00000567003 MGAT1P26572 445 aa14.59□□□□□ -0.07
PALB2-205ENST00000567003 ATP5DP30049 168 aa14.59□□□□□ -0.07
PALB2-205ENST00000567003 STIP1P31948 543 aaKnown RBP14.59□□□□□ -0.07
PALB2-205ENST00000567003 OC90Q02509 493 aaPredicted RBP14.59□□□□□ -0.07
PALB2-205ENST00000567003 TAP2Q03519 686 aa14.59□□□□□ -0.07
PALB2-205ENST00000567003 NDUFA9Q16795 377 aa14.59□□□□□ -0.07
PALB2-205ENST00000567003 MEP1AQ16819 746 aa14.59□□□□□ -0.07
PALB2-205ENST00000567003 KRTCAP3Q53RY4 240 aa14.59□□□□□ -0.07
PALB2-205ENST00000567003 ZNF468Q5VIY5 522 aaPredicted RBP14.59□□□□□ -0.07
PALB2-205ENST00000567003 DOLPP1Q86YN1 238 aa14.59□□□□□ -0.07
PALB2-205ENST00000567003 TSLPQ969D9 159 aa14.59□□□□□ -0.07
PALB2-205ENST00000567003 SDCCAG3Q96C92 435 aa14.59□□□□□ -0.07
PALB2-205ENST00000567003 SPOCK3Q9BQ16 436 aa14.59□□□□□ -0.07
PALB2-205ENST00000567003 MCCC2Q9HCC0 563 aa14.59□□□□□ -0.07
PALB2-205ENST00000567003 SYBUQ9NX95 663 aa14.59□□□□□ -0.07
PALB2-205ENST00000567003 C19orf25Q9UFG5 118 aaPredicted RBP14.59□□□□□ -0.07
PALB2-205ENST00000567003 SH2B3Q9UQQ2 575 aa14.59□□□□□ -0.07
PALB2-205ENST00000567003 PCDHGB6Q9Y5F9 930 aa14.59□□□□□ -0.07
PALB2-205ENST00000567003 ZNF860A6NHJ4 632 aa14.58□□□□□ -0.08
PALB2-205ENST00000567003 MIF4GDA9UHW6 222 aaKnown RBP14.58□□□□□ -0.08
PALB2-205ENST00000567003 TXNDC9O14530 226 aa14.58□□□□□ -0.08
PALB2-205ENST00000567003 ASNA1O43681 348 aa14.58□□□□□ -0.08
PALB2-205ENST00000567003 RDH16O75452 317 aa14.58□□□□□ -0.08
PALB2-205ENST00000567003 CDC123O75794 336 aaPredicted RBP14.58□□□□□ -0.08
PALB2-205ENST00000567003 NEURL1O76050 574 aa14.58□□□□□ -0.08
PALB2-205ENST00000567003 IPO7O95373 1038 aaKnown RBP14.58□□□□□ -0.08
PALB2-205ENST00000567003 NSA2O95478 260 aaKnown RBP14.58□□□□□ -0.08
PALB2-205ENST00000567003 CATP04040 527 aaKnown RBP14.58□□□□□ -0.08
PALB2-205ENST00000567003 CD46P15529 392 aa14.58□□□□□ -0.08
PALB2-205ENST00000567003 PTGER1P34995 402 aa14.58□□□□□ -0.08
PALB2-205ENST00000567003 RPL22P35268 128 aaKnown RBP14.58□□□□□ -0.08
PALB2-205ENST00000567003 CUL1Q13616 776 aa14.58□□□□□ -0.08
PALB2-205ENST00000567003 ARHGAP19Q14CB8 494 aa14.58□□□□□ -0.08
PALB2-205ENST00000567003 TYSND1Q2T9J0 566 aa14.58□□□□□ -0.08
PALB2-205ENST00000567003 SFT2D3Q587I9 215 aa14.58□□□□□ -0.08
PALB2-205ENST00000567003 THEMIS2Q5TEJ8 643 aa14.58□□□□□ -0.08
PALB2-205ENST00000567003 PAPD4Q6PIY7 484 aaKnown RBP14.58□□□□□ -0.08
PALB2-205ENST00000567003 KIAA1328Q86T90 577 aa14.58□□□□□ -0.08
PALB2-205ENST00000567003 PDSS2Q86YH6 399 aa14.58□□□□□ -0.08
PALB2-205ENST00000567003 REXO1L1PQ8IX06 675 aa14.58□□□□□ -0.08
PALB2-205ENST00000567003 LRRC56Q8IYG6 542 aaPredicted RBP14.58□□□□□ -0.08
PALB2-205ENST00000567003 KIF2BQ8N4N8 673 aa14.58□□□□□ -0.08
PALB2-205ENST00000567003 CPSF7Q8N684 471 aaKnown RBP14.58□□□□□ -0.08
PALB2-205ENST00000567003 CCDC89Q8N998 374 aa14.58□□□□□ -0.08
PALB2-205ENST00000567003 ACBD4Q8NC06 268 aa14.58□□□□□ -0.08
PALB2-205ENST00000567003 GIMAP7Q8NHV1 300 aa14.58□□□□□ -0.08
PALB2-205ENST00000567003 DMRTA2Q96SC8 542 aa14.58□□□□□ -0.08
PALB2-205ENST00000567003 ENKD1Q9H0I2 346 aa14.58□□□□□ -0.08
PALB2-205ENST00000567003 FAM114A2Q9NRY5 505 aa14.58□□□□□ -0.08
PALB2-205ENST00000567003 PPT2Q9UMR5 302 aa14.58□□□□□ -0.08
PALB2-205ENST00000567003 NIPBLQ6KC79 2804 aaeCLIP14.58□□□□□ -0.08
PALB2-205ENST00000567003 H0YIG0 161 aa14.57□□□□□ -0.08
PALB2-205ENST00000567003 SP1P08047 785 aa14.57□□□□□ -0.08
PALB2-205ENST00000567003 CAPN3P20807 821 aa14.57□□□□□ -0.08
PALB2-205ENST00000567003 TERF1P54274 439 aa14.57□□□□□ -0.08
PALB2-205ENST00000567003 PTK6Q13882 451 aa14.57□□□□□ -0.08
PALB2-205ENST00000567003 MAPKAPK3Q16644 382 aa14.57□□□□□ -0.08
PALB2-205ENST00000567003 SLC25A25Q6KCM7 469 aa14.57□□□□□ -0.08
PALB2-205ENST00000567003 GHDCQ8N2G8 530 aa14.57□□□□□ -0.08
PALB2-205ENST00000567003 TMEM178AQ8NBL3 297 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms