RNA–Protein interactions for RNA: ENST00000566926.1

CLK3-218, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-218ENST00000566926 RNF31Q96EP0 1072 aa12.87□□□□□ -0.35
CLK3-218ENST00000566926 CCDC138Q96M89 665 aa12.87□□□□□ -0.35
CLK3-218ENST00000566926 BBC3Q96PG8 261 aaPredicted RBP12.87□□□□□ -0.35
CLK3-218ENST00000566926 MIPEPQ99797 713 aa12.87□□□□□ -0.35
CLK3-218ENST00000566926 NDC1Q9BTX1 674 aa12.87□□□□□ -0.35
CLK3-218ENST00000566926 PARVBQ9HBI1 364 aa12.87□□□□□ -0.35
CLK3-218ENST00000566926 MRPS30Q9NP92 439 aaKnown RBP12.87□□□□□ -0.35
CLK3-218ENST00000566926 OXSMQ9NWU1 459 aa12.87□□□□□ -0.35
CLK3-218ENST00000566926 PIEZO2Q9H5I5 2752 aa12.86□□□□□ -0.35
CLK3-218ENST00000566926 A0A1W2PPV9 198 aa12.86□□□□□ -0.35
CLK3-218ENST00000566926 TMEM114B3SHH9 223 aa12.86□□□□□ -0.35
CLK3-218ENST00000566926 TCP11X1B4DZS4 312 aa12.86□□□□□ -0.35
CLK3-218ENST00000566926 C9J4A7 227 aa12.86□□□□□ -0.35
CLK3-218ENST00000566926 E7ENX8 843 aa12.86□□□□□ -0.35
CLK3-218ENST00000566926 G3V2L1 256 aa12.86□□□□□ -0.35
CLK3-218ENST00000566926 NKX2-8O15522 239 aa12.86□□□□□ -0.35
CLK3-218ENST00000566926 SLC16A8O95907 504 aa12.86□□□□□ -0.35
CLK3-218ENST00000566926 PRKAR1AP10644 381 aa12.86□□□□□ -0.35
CLK3-218ENST00000566926 F8A1P23610 371 aa12.86□□□□□ -0.35
CLK3-218ENST00000566926 RORAP35398 523 aa12.86□□□□□ -0.35
CLK3-218ENST00000566926 CCR10P46092 362 aa12.86□□□□□ -0.35
CLK3-218ENST00000566926 TAP2Q03519 686 aa12.86□□□□□ -0.35
CLK3-218ENST00000566926 PRDX1Q06830 199 aaKnown RBP12.86□□□□□ -0.35
CLK3-218ENST00000566926 TBR1Q16650 682 aa12.86□□□□□ -0.35
CLK3-218ENST00000566926 FAM214AQ32MH5 1076 aa12.86□□□□□ -0.35
CLK3-218ENST00000566926 THEMIS2Q5TEJ8 643 aa12.86□□□□□ -0.35
CLK3-218ENST00000566926 PRAMEF17Q5VTA0 474 aa12.86□□□□□ -0.35
CLK3-218ENST00000566926 FCRL6Q6DN72 434 aa12.86□□□□□ -0.35
CLK3-218ENST00000566926 FAM199XQ6PEV8 388 aaPredicted RBP12.86□□□□□ -0.35
CLK3-218ENST00000566926 SYVN1Q86TM6 617 aa12.86□□□□□ -0.35
CLK3-218ENST00000566926 HOMEZQ8IX15 550 aa12.86□□□□□ -0.35
CLK3-218ENST00000566926 FAM20CQ8IXL6 584 aa12.86□□□□□ -0.35
CLK3-218ENST00000566926 TMEM151AQ8N4L1 468 aa12.86□□□□□ -0.35
CLK3-218ENST00000566926 SLC38A9Q8NBW4 561 aa12.86□□□□□ -0.35
CLK3-218ENST00000566926 ZNF480Q8WV37 535 aa12.86□□□□□ -0.35
CLK3-218ENST00000566926 MED8Q96G25 268 aa12.86□□□□□ -0.35
CLK3-218ENST00000566926 C7orf26Q96N11 449 aa12.86□□□□□ -0.35
CLK3-218ENST00000566926 TRMOQ9BU70 441 aa12.86□□□□□ -0.35
CLK3-218ENST00000566926 ACAT2Q9BWD1 397 aa12.86□□□□□ -0.35
CLK3-218ENST00000566926 NLNQ9BYT8 704 aa12.86□□□□□ -0.35
CLK3-218ENST00000566926 SPRTNQ9H040 489 aaPredicted RBP12.86□□□□□ -0.35
CLK3-218ENST00000566926 PCBD2Q9H0N5 130 aa12.86□□□□□ -0.35
CLK3-218ENST00000566926 CHST8Q9H2A9 424 aa12.86□□□□□ -0.35
CLK3-218ENST00000566926 ALG9Q9H6U8 611 aa12.86□□□□□ -0.35
CLK3-218ENST00000566926 THAP1Q9NVV9 213 aa12.86□□□□□ -0.35
CLK3-218ENST00000566926 ZNF358Q9NW07 568 aa12.86□□□□□ -0.35
CLK3-218ENST00000566926 CPSF2Q9P2I0 782 aaKnown RBP12.86□□□□□ -0.35
CLK3-218ENST00000566926 RNF112Q9ULX5 631 aa12.86□□□□□ -0.35
CLK3-218ENST00000566926 POLHQ9Y253 713 aa12.86□□□□□ -0.35
CLK3-218ENST00000566926 PADI2Q9Y2J8 665 aa12.86□□□□□ -0.35
CLK3-218ENST00000566926 WDR91A4D1P6 747 aa12.85□□□□□ -0.35
CLK3-218ENST00000566926 KRT87PA6NCN2 255 aa12.85□□□□□ -0.35
CLK3-218ENST00000566926 H3BMH7 237 aa12.85□□□□□ -0.35
CLK3-218ENST00000566926 IPO13O94829 963 aaKnown RBP12.85□□□□□ -0.35
CLK3-218ENST00000566926 PIM1P11309 404 aaPredicted RBP12.85□□□□□ -0.35
CLK3-218ENST00000566926 CCND1P24385 295 aa12.85□□□□□ -0.35
CLK3-218ENST00000566926 HRH2P25021 359 aa12.85□□□□□ -0.35
CLK3-218ENST00000566926 PSMB5P28074 263 aa12.85□□□□□ -0.35
CLK3-218ENST00000566926 AP1S2P56377 157 aa12.85□□□□□ -0.35
CLK3-218ENST00000566926 STX3Q13277 289 aa12.85□□□□□ -0.35
CLK3-218ENST00000566926 ERV3-1Q14264 604 aa12.85□□□□□ -0.35
CLK3-218ENST00000566926 GRM7Q14831 915 aa12.85□□□□□ -0.35
CLK3-218ENST00000566926 CHI3L2Q15782 390 aa12.85□□□□□ -0.35
CLK3-218ENST00000566926 ICE2Q659A1 982 aa12.85□□□□□ -0.35
CLK3-218ENST00000566926 METTL2BQ6P1Q9 378 aaKnown RBP12.85□□□□□ -0.35
CLK3-218ENST00000566926 SUSD1Q6UWL2 747 aa12.85□□□□□ -0.35
CLK3-218ENST00000566926 FRA10AC1Q70Z53 315 aa12.85□□□□□ -0.35
CLK3-218ENST00000566926 CPLX4Q7Z7G2 160 aa12.85□□□□□ -0.35
CLK3-218ENST00000566926 C10orf107Q8IVU9 208 aa12.85□□□□□ -0.35
CLK3-218ENST00000566926 ZNF655Q8N720 491 aaPredicted RBP12.85□□□□□ -0.35
CLK3-218ENST00000566926 TTC29Q8NA56 475 aaPredicted RBP12.85□□□□□ -0.35
CLK3-218ENST00000566926 PPP4R1Q8TF05 950 aa12.85□□□□□ -0.35
CLK3-218ENST00000566926 APOBEC4Q8WW27 367 aaKnown RBP12.85□□□□□ -0.35
CLK3-218ENST00000566926 SIKE1Q9BRV8 207 aa12.85□□□□□ -0.35
CLK3-218ENST00000566926 DPH7Q9BTV6 452 aa12.85□□□□□ -0.35
CLK3-218ENST00000566926 ADNPQ9H2P0 1102 aa12.85□□□□□ -0.35
CLK3-218ENST00000566926 C12orf65Q9H3J6 166 aaKnown RBP12.85□□□□□ -0.35
CLK3-218ENST00000566926 ACTL8Q9H568 366 aa12.85□□□□□ -0.35
CLK3-218ENST00000566926 AKIRIN1Q9H9L7 192 aaPredicted RBP12.85□□□□□ -0.35
CLK3-218ENST00000566926 CCDC177Q9NQR7 707 aaPredicted RBP12.85□□□□□ -0.35
CLK3-218ENST00000566926 ENAMQ9NRM1 1142 aa12.85□□□□□ -0.35
CLK3-218ENST00000566926 NUDT4Q9NZJ9 180 aa12.85□□□□□ -0.35
CLK3-218ENST00000566926 GPN3Q9UHW5 284 aaPredicted RBP12.85□□□□□ -0.35
CLK3-218ENST00000566926 SNX7Q9UNH6 387 aa12.85□□□□□ -0.35
CLK3-218ENST00000566926 PDE10AQ9Y233 779 aa12.85□□□□□ -0.35
CLK3-218ENST00000566926 KLHL20Q9Y2M5 609 aa12.85□□□□□ -0.35
CLK3-218ENST00000566926 MRPS18BQ9Y676 258 aaKnown RBP12.85□□□□□ -0.35
CLK3-218ENST00000566926 ATRXP46100 2492 aa12.85□□□□□ -0.35
CLK3-218ENST00000566926 ATMQ13315 3056 aa12.85□□□□□ -0.35
CLK3-218ENST00000566926 OR2A25A4D2G3 310 aa12.84□□□□□ -0.35
CLK3-218ENST00000566926 STX16-NPEPL1H3BU86 382 aa12.84□□□□□ -0.35
CLK3-218ENST00000566926 NDUFAB1O14561 156 aa12.84□□□□□ -0.35
CLK3-218ENST00000566926 STX16O14662 325 aa12.84□□□□□ -0.35
CLK3-218ENST00000566926 TGDSO95455 350 aa12.84□□□□□ -0.35
CLK3-218ENST00000566926 S100BP04271 92 aaPredicted RBP12.84□□□□□ -0.35
CLK3-218ENST00000566926 BGNP21810 368 aa12.84□□□□□ -0.35
CLK3-218ENST00000566926 IMPA1P29218 277 aa12.84□□□□□ -0.35
CLK3-218ENST00000566926 HK2P52789 917 aa12.84□□□□□ -0.35
CLK3-218ENST00000566926 DCDP81605 110 aaKnown RBP12.84□□□□□ -0.35
CLK3-218ENST00000566926 RELAQ04206 551 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms