RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 TSC2P49815 1807 aa2.84□□□□□ -1.96
CHD9-218ENST00000566029 QSER1Q2KHR3 1735 aa2.84□□□□□ -1.96
CHD9-218ENST00000566029 PMS2P1A4D2B8 440 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 TP53P04637 393 aaPredicted RBP2.83□□□□□ -1.96
CHD9-218ENST00000566029 PFKMP08237 780 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 PRELPP51888 382 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 CDH8P55286 799 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 NRG3P56975 720 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 TNK1Q13470 666 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 GRIK4Q16099 956 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 LRRC66Q68CR7 880 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 MZT2AQ6P582 158 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 C3P1Q6ZMU1 363 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 CCDC71Q8IV32 467 aaPredicted RBP2.83□□□□□ -1.96
CHD9-218ENST00000566029 TRNT1Q96Q11 434 aaKnown RBP2.83□□□□□ -1.96
CHD9-218ENST00000566029 FYTTD1Q96QD9 318 aaKnown RBP2.83□□□□□ -1.96
CHD9-218ENST00000566029 TCF25Q9BQ70 676 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 PI4K2AQ9BTU6 479 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 SMDT1Q9H4I9 107 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 ESRP2Q9H6T0 727 aaKnown RBP2.83□□□□□ -1.96
CHD9-218ENST00000566029 SPON1Q9HCB6 807 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 XPR1Q9UBH6 696 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 PCDHB5Q9Y5E4 795 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 BLACEA4D250 179 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 ABCD4O14678 606 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 SNRPB2P08579 225 aaKnown RBP2.83□□□□□ -1.96
CHD9-218ENST00000566029 SYN1P17600 705 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 MAP2K3P46734 347 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 KCNJ5P48544 419 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 BCAR1P56945 870 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 RPS8P62241 208 aaKnown RBP2.83□□□□□ -1.96
CHD9-218ENST00000566029 SP140Q13342 867 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 ITPK1Q13572 414 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 DDX39BQ13838 428 aaKnown RBP2.83□□□□□ -1.96
CHD9-218ENST00000566029 PIGHQ14442 188 aaPredicted RBP2.83□□□□□ -1.96
CHD9-218ENST00000566029 SYTL3Q4VX76 610 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 UNC50Q53HI1 259 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 TRILQ7L0X0 811 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 TMCO2Q7Z6W1 182 aaPredicted RBP2.83□□□□□ -1.96
CHD9-218ENST00000566029 DCAF4Q8WV16 495 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 FCRL3Q96P31 734 aaPredicted RBP2.83□□□□□ -1.96
CHD9-218ENST00000566029 OR5M11Q96RB7 305 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 DEFB129Q9H1M3 183 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 RANGRFQ9HD47 186 aaPredicted RBP2.83□□□□□ -1.96
CHD9-218ENST00000566029 GKN1Q9NS71 199 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 SIRT5Q9NXA8 310 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 SEPT9Q9UHD8 586 aaPredicted RBP2.83□□□□□ -1.96
CHD9-218ENST00000566029 A8MT66 165 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 STX7O15400 261 aaKnown RBP2.83□□□□□ -1.96
CHD9-218ENST00000566029 STBD1O95210 358 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 SLC25A27O95847 323 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 AGR2O95994 175 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 ARP10275 920 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 GNA15P30679 374 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 TIE1P35590 1138 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 HUNKP57058 714 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 RAB25P57735 213 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 GRIK2Q13002 908 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 SPP2Q13103 211 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 RFX4Q33E94 735 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 UGT3A2Q3SY77 523 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 FAM174BQ3ZCQ3 159 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 C4orf46Q504U0 113 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 CELF3Q5SZQ8 465 aaKnown RBP2.83□□□□□ -1.96
CHD9-218ENST00000566029 RHOUQ7L0Q8 258 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 NIM1KQ8IY84 436 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 CYP4Z2PQ8N1L4 340 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 TMEM161BQ8NDZ6 487 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 NSMAFQ92636 917 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 GTF2H4Q92759 462 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 RPL10LQ96L21 214 aaKnown RBP2.83□□□□□ -1.96
CHD9-218ENST00000566029 DPCDQ9BVM2 203 aaPredicted RBP2.83□□□□□ -1.96
CHD9-218ENST00000566029 ASPSCR1Q9BZE9 553 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 OSGEPL1Q9H4B0 414 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 TNFRSF12AQ9NP84 129 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 EMC7Q9NPA0 242 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 AIG1Q9NVV5 245 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 TJP2Q9UDY2 1190 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 ASF1AQ9Y294 204 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 SIPA1L2Q9P2F8 1722 aaPredicted RBP2.83□□□□□ -1.96
CHD9-218ENST00000566029 AHSGP02765 367 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 CD36P16671 472 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 NPR3P17342 541 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 HSD17B2P37059 387 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 NRIP1P48552 1158 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 SMSP52788 366 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 ERVK-25P63136 954 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 SIM2Q14190 667 aaPredicted RBP2.83□□□□□ -1.96
CHD9-218ENST00000566029 POU4F3Q15319 338 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 TRNP1Q6NT89 227 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 KDELC1Q6UW63 502 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 DLEU7Q6UYE1 221 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 RBFAQ8N0V3 343 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 OR5B17Q8NGF7 314 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 PHOSPHO2Q8TCD6 241 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 MAGEE2Q8TD90 523 aaPredicted RBP2.83□□□□□ -1.96
CHD9-218ENST00000566029 SETD7Q8WTS6 366 aaKnown RBP2.83□□□□□ -1.96
CHD9-218ENST00000566029 AKT1S1Q96B36 256 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 PTERQ96BW5 349 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 ERVK-6Q9BXR3 956 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms