RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 MAGP20916 626 aa12.1□□□□□ -0.47
SF3B3-206ENST00000565990 ATP6V1C1P21283 382 aa12.1□□□□□ -0.47
SF3B3-206ENST00000565990 EEF1DP29692 281 aaKnown RBP12.1□□□□□ -0.47
SF3B3-206ENST00000565990 VHLP40337 213 aa12.1□□□□□ -0.47
SF3B3-206ENST00000565990 PIK3CGP48736 1102 aa12.1□□□□□ -0.47
SF3B3-206ENST00000565990 PPM1FP49593 454 aaPredicted RBP12.1□□□□□ -0.47
SF3B3-206ENST00000565990 CSNK1G2P78368 415 aa12.1□□□□□ -0.47
SF3B3-206ENST00000565990 EIF3IQ13347 325 aaKnown RBP12.1□□□□□ -0.47
SF3B3-206ENST00000565990 TSTA3Q13630 321 aaPredicted RBP12.1□□□□□ -0.47
SF3B3-206ENST00000565990 GTF2H2Q13888 395 aa12.1□□□□□ -0.47
SF3B3-206ENST00000565990 C16orf72Q14CZ0 275 aa12.1□□□□□ -0.47
SF3B3-206ENST00000565990 TRMT5Q32P41 509 aaKnown RBP12.1□□□□□ -0.47
SF3B3-206ENST00000565990 CATSPEREQ5SY80 951 aa12.1□□□□□ -0.47
SF3B3-206ENST00000565990 LIPMQ5VYY2 423 aa12.1□□□□□ -0.47
SF3B3-206ENST00000565990 GTF2H2CQ6P1K8 395 aa12.1□□□□□ -0.47
SF3B3-206ENST00000565990 TRIM73Q86UV7 250 aa12.1□□□□□ -0.47
SF3B3-206ENST00000565990 BPHLQ86WA6 291 aaPredicted RBP12.1□□□□□ -0.47
SF3B3-206ENST00000565990 NUDCD3Q8IVD9 361 aa12.1□□□□□ -0.47
SF3B3-206ENST00000565990 C10orf107Q8IVU9 208 aa12.1□□□□□ -0.47
SF3B3-206ENST00000565990 WDR75Q8IWA0 830 aaKnown RBP12.1□□□□□ -0.47
SF3B3-206ENST00000565990 CHCHD4Q8N4Q1 142 aa12.1□□□□□ -0.47
SF3B3-206ENST00000565990 AGBL5Q8NDL9 886 aa12.1□□□□□ -0.47
SF3B3-206ENST00000565990 RCBTB1Q8NDN9 531 aa12.1□□□□□ -0.47
SF3B3-206ENST00000565990 RFWD2Q8NHY2 731 aa12.1□□□□□ -0.47
SF3B3-206ENST00000565990 NAF1Q96HR8 494 aaKnown RBP12.1□□□□□ -0.47
SF3B3-206ENST00000565990 PRAP1Q96NZ9 151 aa12.1□□□□□ -0.47
SF3B3-206ENST00000565990 NTMT1Q9BV86 223 aa12.1□□□□□ -0.47
SF3B3-206ENST00000565990 STRADBQ9C0K7 418 aa12.1□□□□□ -0.47
SF3B3-206ENST00000565990 SYNDIG1Q9H7V2 258 aa12.1□□□□□ -0.47
SF3B3-206ENST00000565990 NT5DC2Q9H857 520 aa12.1□□□□□ -0.47
SF3B3-206ENST00000565990 IPPKQ9H8X2 491 aa12.1□□□□□ -0.47
SF3B3-206ENST00000565990 PELI2Q9HAT8 420 aa12.1□□□□□ -0.47
SF3B3-206ENST00000565990 ZBTB26Q9HCK0 441 aa12.1□□□□□ -0.47
SF3B3-206ENST00000565990 PDE7BQ9NP56 450 aa12.1□□□□□ -0.47
SF3B3-206ENST00000565990 FBXO8Q9NRD0 319 aa12.1□□□□□ -0.47
SF3B3-206ENST00000565990 SIDT1Q9NXL6 827 aaKnown RBP12.1□□□□□ -0.47
SF3B3-206ENST00000565990 KLHL20Q9Y2M5 609 aa12.1□□□□□ -0.47
SF3B3-206ENST00000565990 DYRK1BQ9Y463 629 aa12.1□□□□□ -0.47
SF3B3-206ENST00000565990 A0A0G2JND7 137 aa12.09□□□□□ -0.47
SF3B3-206ENST00000565990 A0A1W2PNU3 283 aaPredicted RBP12.09□□□□□ -0.47
SF3B3-206ENST00000565990 CAPN14A8MX76 684 aa12.09□□□□□ -0.47
SF3B3-206ENST00000565990 B4E171 279 aa12.09□□□□□ -0.47
SF3B3-206ENST00000565990 H3BMH7 237 aa12.09□□□□□ -0.47
SF3B3-206ENST00000565990 FCHO1O14526 889 aa12.09□□□□□ -0.47
SF3B3-206ENST00000565990 CLGNO14967 610 aa12.09□□□□□ -0.47
SF3B3-206ENST00000565990 GYG2O15488 501 aa12.09□□□□□ -0.47
SF3B3-206ENST00000565990 HCRTR1O43613 425 aa12.09□□□□□ -0.47
SF3B3-206ENST00000565990 UGDHO60701 494 aa12.09□□□□□ -0.47
SF3B3-206ENST00000565990 CTSVO60911 334 aa12.09□□□□□ -0.47
SF3B3-206ENST00000565990 KATNA1O75449 491 aa12.09□□□□□ -0.47
SF3B3-206ENST00000565990 CDH1P12830 882 aa12.09□□□□□ -0.47
SF3B3-206ENST00000565990 FOLR1P15328 257 aa12.09□□□□□ -0.47
SF3B3-206ENST00000565990 BGNP21810 368 aa12.09□□□□□ -0.47
SF3B3-206ENST00000565990 KCNA4P22459 653 aa12.09□□□□□ -0.47
SF3B3-206ENST00000565990 PRDX6P30041 224 aa12.09□□□□□ -0.47
SF3B3-206ENST00000565990 TSPAN7P41732 249 aa12.09□□□□□ -0.47
SF3B3-206ENST00000565990 SEPHS1P49903 392 aa12.09□□□□□ -0.47
SF3B3-206ENST00000565990 CCR8P51685 355 aa12.09□□□□□ -0.47
SF3B3-206ENST00000565990 NAGLUP54802 743 aa12.09□□□□□ -0.47
SF3B3-206ENST00000565990 CLDN6P56747 220 aa12.09□□□□□ -0.47
SF3B3-206ENST00000565990 MC2RQ01718 297 aa12.09□□□□□ -0.47
SF3B3-206ENST00000565990 CLCQ05315 142 aa12.09□□□□□ -0.47
SF3B3-206ENST00000565990 CAMK2BQ13554 666 aa12.09□□□□□ -0.47
SF3B3-206ENST00000565990 BLMHQ13867 455 aa12.09□□□□□ -0.47
SF3B3-206ENST00000565990 TAF11Q15544 211 aa12.09□□□□□ -0.47
SF3B3-206ENST00000565990 SNAP47Q5SQN1 464 aa12.09□□□□□ -0.47
SF3B3-206ENST00000565990 PHF19Q5T6S3 580 aa12.09□□□□□ -0.47
SF3B3-206ENST00000565990 LIPJQ5W064 366 aa12.09□□□□□ -0.47
SF3B3-206ENST00000565990 GOLGA7Q7Z5G4 137 aa12.09□□□□□ -0.47
SF3B3-206ENST00000565990 NET1Q7Z628 596 aaPredicted RBP12.09□□□□□ -0.47
SF3B3-206ENST00000565990 C19orf47Q8N9M1 422 aaKnown RBP12.09□□□□□ -0.47
SF3B3-206ENST00000565990 L3MBTL4Q8NA19 623 aa12.09□□□□□ -0.47
SF3B3-206ENST00000565990 SREK1Q8WXA9 508 aaKnown RBP12.09□□□□□ -0.47
SF3B3-206ENST00000565990 MCUR1Q96AQ8 359 aa12.09□□□□□ -0.47
SF3B3-206ENST00000565990 MOCOSQ96EN8 888 aa12.09□□□□□ -0.47
SF3B3-206ENST00000565990 PRR11Q96HE9 360 aaPredicted RBP12.09□□□□□ -0.47
SF3B3-206ENST00000565990 CNDP1Q96KN2 507 aa12.09□□□□□ -0.47
SF3B3-206ENST00000565990 ZNF285Q96NJ3 590 aa12.09□□□□□ -0.47
SF3B3-206ENST00000565990 OR2A5Q96R48 311 aa12.09□□□□□ -0.47
SF3B3-206ENST00000565990 CMKLR1Q99788 373 aa12.09□□□□□ -0.47
SF3B3-206ENST00000565990 CCDC28BQ9BUN5 200 aa12.09□□□□□ -0.47
SF3B3-206ENST00000565990 GATA5Q9BWX5 397 aaPredicted RBP12.09□□□□□ -0.47
SF3B3-206ENST00000565990 CADM1Q9BY67 442 aaKnown RBP12.09□□□□□ -0.47
SF3B3-206ENST00000565990 B3GNT4Q9C0J1 378 aa12.09□□□□□ -0.47
SF3B3-206ENST00000565990 PITHD1Q9GZP4 211 aaPredicted RBP12.09□□□□□ -0.47
SF3B3-206ENST00000565990 GSTO2Q9H4Y5 243 aa12.09□□□□□ -0.47
SF3B3-206ENST00000565990 CUEDC1Q9NWM3 386 aaPredicted RBP12.09□□□□□ -0.47
SF3B3-206ENST00000565990 OCIAD1Q9NX40 245 aa12.09□□□□□ -0.47
SF3B3-206ENST00000565990 STX18Q9P2W9 335 aaKnown RBP12.09□□□□□ -0.47
SF3B3-206ENST00000565990 TAGLN3Q9UI15 199 aa12.09□□□□□ -0.47
SF3B3-206ENST00000565990 ZNF490Q9ULM2 529 aaPredicted RBP12.09□□□□□ -0.47
SF3B3-206ENST00000565990 TRIM33Q9UPN9 1127 aa12.09□□□□□ -0.47
SF3B3-206ENST00000565990 CCDC187A0A096LP49 1063 aa12.08□□□□□ -0.48
SF3B3-206ENST00000565990 E7EQ34 232 aa12.08□□□□□ -0.48
SF3B3-206ENST00000565990 PPP6CO00743 305 aa12.08□□□□□ -0.48
SF3B3-206ENST00000565990 MAP3K7O43318 606 aa12.08□□□□□ -0.48
SF3B3-206ENST00000565990 LCMT2O60294 686 aaKnown RBP12.08□□□□□ -0.48
SF3B3-206ENST00000565990 SRPX2O60687 465 aaPredicted RBP12.08□□□□□ -0.48
SF3B3-206ENST00000565990 SUPT7LO94864 414 aa12.08□□□□□ -0.48
SF3B3-206ENST00000565990 SNUPNO95149 360 aaKnown RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms