RNA–Protein interactions for RNA: ENST00000565966.5

HERPUD1-210, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-210ENST00000565966 PLD3Q8IV08 490 aa13.19□□□□□ -0.3
HERPUD1-210ENST00000565966 TCAIMQ8N3R3 496 aa13.19□□□□□ -0.3
HERPUD1-210ENST00000565966 ABHD11Q8NFV4 315 aa13.19□□□□□ -0.3
HERPUD1-210ENST00000565966 ADAMTS17Q8TE56 1095 aa13.19□□□□□ -0.3
HERPUD1-210ENST00000565966 EXT2Q93063 718 aa13.19□□□□□ -0.3
HERPUD1-210ENST00000565966 CAVIN3Q969G5 261 aa13.19□□□□□ -0.3
HERPUD1-210ENST00000565966 NEIL2Q969S2 332 aa13.19□□□□□ -0.3
HERPUD1-210ENST00000565966 MTBPQ96DY7 904 aa13.19□□□□□ -0.3
HERPUD1-210ENST00000565966 THAP11Q96EK4 314 aa13.19□□□□□ -0.3
HERPUD1-210ENST00000565966 ZNF358Q9NW07 568 aa13.19□□□□□ -0.3
HERPUD1-210ENST00000565966 GEMIN8Q9NWZ8 242 aaKnown RBP13.19□□□□□ -0.3
HERPUD1-210ENST00000565966 WWOXQ9NZC7 414 aa13.19□□□□□ -0.3
HERPUD1-210ENST00000565966 NUDT4Q9NZJ9 180 aa13.19□□□□□ -0.3
HERPUD1-210ENST00000565966 PSMC3IPQ9P2W1 217 aaPredicted RBP13.19□□□□□ -0.3
HERPUD1-210ENST00000565966 RAB21Q9UL25 225 aa13.19□□□□□ -0.3
HERPUD1-210ENST00000565966 KCNMB2Q9Y691 235 aa13.19□□□□□ -0.3
HERPUD1-210ENST00000565966 DOCK10Q96BY6 2186 aa13.18□□□□□ -0.3
HERPUD1-210ENST00000565966 KCNE1BA0A087WTH5 132 aa13.18□□□□□ -0.3
HERPUD1-210ENST00000565966 IQANK1A0A1B0GTG1 560 aa13.18□□□□□ -0.3
HERPUD1-210ENST00000565966 CCDC189A1A4V9 331 aa13.18□□□□□ -0.3
HERPUD1-210ENST00000565966 SUPT3HB4E1H0 165 aa13.18□□□□□ -0.3
HERPUD1-210ENST00000565966 UBXN8O00124 270 aa13.18□□□□□ -0.3
HERPUD1-210ENST00000565966 SUPT3HO75486 399 aa13.18□□□□□ -0.3
HERPUD1-210ENST00000565966 WDR47O94967 919 aa13.18□□□□□ -0.3
HERPUD1-210ENST00000565966 ALBP02768 609 aa13.18□□□□□ -0.3
HERPUD1-210ENST00000565966 S100BP04271 92 aaPredicted RBP13.18□□□□□ -0.3
HERPUD1-210ENST00000565966 PRB1P04280 392 aa13.18□□□□□ -0.3
HERPUD1-210ENST00000565966 ATXN8OSP0DMR3 200 aa13.18□□□□□ -0.3
HERPUD1-210ENST00000565966 COL6A2P12110 1019 aa13.18□□□□□ -0.3
HERPUD1-210ENST00000565966 MTHFD2P13995 350 aa13.18□□□□□ -0.3
HERPUD1-210ENST00000565966 GRK3P35626 688 aa13.18□□□□□ -0.3
HERPUD1-210ENST00000565966 HSPA7P48741 367 aa13.18□□□□□ -0.3
HERPUD1-210ENST00000565966 SSPNQ14714 243 aa13.18□□□□□ -0.3
HERPUD1-210ENST00000565966 SLC9A5Q14940 896 aa13.18□□□□□ -0.3
HERPUD1-210ENST00000565966 TECRLQ5HYJ1 363 aa13.18□□□□□ -0.3
HERPUD1-210ENST00000565966 CATSPEREQ5SY80 951 aa13.18□□□□□ -0.3
HERPUD1-210ENST00000565966 GARNL3Q5VVW2 1013 aa13.18□□□□□ -0.3
HERPUD1-210ENST00000565966 PRMT9Q6P2P2 845 aa13.18□□□□□ -0.3
HERPUD1-210ENST00000565966 KLC3Q6P597 504 aa13.18□□□□□ -0.3
HERPUD1-210ENST00000565966 OVCH1Q7RTY7 1134 aa13.18□□□□□ -0.3
HERPUD1-210ENST00000565966 CSNK1A1LQ8N752 337 aa13.18□□□□□ -0.3
HERPUD1-210ENST00000565966 OR4K1Q8NGD4 311 aa13.18□□□□□ -0.3
HERPUD1-210ENST00000565966 MZB1Q8WU39 189 aa13.18□□□□□ -0.3
HERPUD1-210ENST00000565966 SLC5A11Q8WWX8 675 aa13.18□□□□□ -0.3
HERPUD1-210ENST00000565966 ESAMQ96AP7 390 aa13.18□□□□□ -0.3
HERPUD1-210ENST00000565966 FKBP10Q96AY3 582 aa13.18□□□□□ -0.3
HERPUD1-210ENST00000565966 CABS1Q96KC9 395 aa13.18□□□□□ -0.3
HERPUD1-210ENST00000565966 TSNARE1Q96NA8 513 aa13.18□□□□□ -0.3
HERPUD1-210ENST00000565966 SEMA4CQ9C0C4 833 aa13.18□□□□□ -0.3
HERPUD1-210ENST00000565966 ZNF304Q9HCX3 659 aa13.18□□□□□ -0.3
HERPUD1-210ENST00000565966 SLC22A11Q9NSA0 550 aa13.18□□□□□ -0.3
HERPUD1-210ENST00000565966 TUBD1Q9UJT1 453 aa13.18□□□□□ -0.3
HERPUD1-210ENST00000565966 RUVBL1Q9Y265 456 aaKnown RBP13.18□□□□□ -0.3
HERPUD1-210ENST00000565966 MAN2B2Q9Y2E5 1009 aa13.18□□□□□ -0.3
HERPUD1-210ENST00000565966 PTRH2Q9Y3E5 179 aaKnown RBP13.18□□□□□ -0.3
HERPUD1-210ENST00000565966 DYRK1BQ9Y463 629 aa13.18□□□□□ -0.3
HERPUD1-210ENST00000565966 KCNE2Q9Y6J6 123 aa13.18□□□□□ -0.3
HERPUD1-210ENST00000565966 TLN1Q9Y490 2541 aaKnown RBP13.17□□□□□ -0.3
HERPUD1-210ENST00000565966 SYCE1LA8MT33 242 aa13.17□□□□□ -0.3
HERPUD1-210ENST00000565966 STK16O75716 305 aa13.17□□□□□ -0.3
HERPUD1-210ENST00000565966 IPO13O94829 963 aaKnown RBP13.17□□□□□ -0.3
HERPUD1-210ENST00000565966 MED26O95402 600 aa13.17□□□□□ -0.3
HERPUD1-210ENST00000565966 ITGAXP20702 1163 aa13.17□□□□□ -0.3
HERPUD1-210ENST00000565966 FOLR3P41439 243 aa13.17□□□□□ -0.3
HERPUD1-210ENST00000565966 OR1D4P47884 311 aa13.17□□□□□ -0.3
HERPUD1-210ENST00000565966 CCR8P51685 355 aa13.17□□□□□ -0.3
HERPUD1-210ENST00000565966 MEF2AQ02078 507 aaPredicted RBP13.17□□□□□ -0.3
HERPUD1-210ENST00000565966 C19orf57Q0VDD7 668 aa13.17□□□□□ -0.3
HERPUD1-210ENST00000565966 KCNAB2Q13303 367 aa13.17□□□□□ -0.3
HERPUD1-210ENST00000565966 TSNAXIP1Q2TAA8 658 aa13.17□□□□□ -0.3
HERPUD1-210ENST00000565966 HKDC1Q2TB90 917 aa13.17□□□□□ -0.3
HERPUD1-210ENST00000565966 FAM69BQ5VUD6 431 aa13.17□□□□□ -0.3
HERPUD1-210ENST00000565966 TDRPQ86YL5 185 aa13.17□□□□□ -0.3
HERPUD1-210ENST00000565966 RAB43Q86YS6 212 aa13.17□□□□□ -0.3
HERPUD1-210ENST00000565966 APLFQ8IW19 511 aaPredicted RBP13.17□□□□□ -0.3
HERPUD1-210ENST00000565966 OR2Y1Q8NGV0 311 aa13.17□□□□□ -0.3
HERPUD1-210ENST00000565966 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.17□□□□□ -0.3
HERPUD1-210ENST00000565966 MVB12AQ96EY5 273 aa13.17□□□□□ -0.3
HERPUD1-210ENST00000565966 C10orf90Q96M02 699 aa13.17□□□□□ -0.3
HERPUD1-210ENST00000565966 SARGQ9BW04 601 aa13.17□□□□□ -0.3
HERPUD1-210ENST00000565966 SLC26A1Q9H2B4 701 aa13.17□□□□□ -0.3
HERPUD1-210ENST00000565966 SPNS1Q9H2V7 528 aa13.17□□□□□ -0.3
HERPUD1-210ENST00000565966 CNOT10Q9H9A5 744 aaKnown RBP13.17□□□□□ -0.3
HERPUD1-210ENST00000565966 PPCSQ9HAB8 311 aa13.17□□□□□ -0.3
HERPUD1-210ENST00000565966 PELI2Q9HAT8 420 aa13.17□□□□□ -0.3
HERPUD1-210ENST00000565966 TBK1Q9UHD2 729 aa13.17□□□□□ -0.3
HERPUD1-210ENST00000565966 CDC14AQ9UNH5 594 aa13.17□□□□□ -0.3
HERPUD1-210ENST00000565966 ASB1Q9Y576 335 aa13.17□□□□□ -0.3
HERPUD1-210ENST00000565966 KALRNO60229 2985 aa13.17□□□□□ -0.3
HERPUD1-210ENST00000565966 TNRC6AQ8NDV7 1962 aaKnown RBP13.16□□□□□ -0.3
HERPUD1-210ENST00000565966 FEZF1A0PJY2 475 aa13.16□□□□□ -0.3
HERPUD1-210ENST00000565966 MAP2K7O14733 419 aa13.16□□□□□ -0.3
HERPUD1-210ENST00000565966 P2RX6O15547 441 aa13.16□□□□□ -0.3
HERPUD1-210ENST00000565966 LCMT2O60294 686 aaKnown RBP13.16□□□□□ -0.3
HERPUD1-210ENST00000565966 CNOT3O75175 753 aaKnown RBP13.16□□□□□ -0.3
HERPUD1-210ENST00000565966 C1QL1O75973 258 aa13.16□□□□□ -0.3
HERPUD1-210ENST00000565966 BCL6P41182 706 aa13.16□□□□□ -0.3
HERPUD1-210ENST00000565966 SLCO1A2P46721 670 aa13.16□□□□□ -0.3
HERPUD1-210ENST00000565966 AGTR2P50052 363 aa13.16□□□□□ -0.3
HERPUD1-210ENST00000565966 CDC16Q13042 620 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms