RNA–Protein interactions for RNA: ENST00000565442.1

CHD9-215, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-215ENST00000565442 AFAP1L1Q8TED9 768 aa3.93□□□□□ -1.78
CHD9-215ENST00000565442 GRK7Q8WTQ7 553 aa3.93□□□□□ -1.78
CHD9-215ENST00000565442 APOBEC4Q8WW27 367 aaKnown RBP3.93□□□□□ -1.78
CHD9-215ENST00000565442 TMEM190Q8WZ59 177 aa3.93□□□□□ -1.78
CHD9-215ENST00000565442 ARHGAP45Q92619 1136 aa3.93□□□□□ -1.78
CHD9-215ENST00000565442 CENPTQ96BT3 561 aa3.93□□□□□ -1.78
CHD9-215ENST00000565442 RBM41Q96IZ5 413 aaKnown RBP3.93□□□□□ -1.78
CHD9-215ENST00000565442 CDCA3Q99618 268 aaPredicted RBP3.93□□□□□ -1.78
CHD9-215ENST00000565442 PI4K2AQ9BTU6 479 aa3.93□□□□□ -1.78
CHD9-215ENST00000565442 FUT8Q9BYC5 575 aa3.93□□□□□ -1.78
CHD9-215ENST00000565442 ZNF696Q9H7X3 374 aa3.93□□□□□ -1.78
CHD9-215ENST00000565442 GAB2Q9UQC2 676 aa3.93□□□□□ -1.78
CHD9-215ENST00000565442 KLK4Q9Y5K2 254 aa3.93□□□□□ -1.78
CHD9-215ENST00000565442 DISP3Q9P2K9 1392 aa3.92□□□□□ -1.78
CHD9-215ENST00000565442 TRAV18A0A075B6X5 111 aa3.92□□□□□ -1.78
CHD9-215ENST00000565442 A0A087WW49 117 aa3.92□□□□□ -1.78
CHD9-215ENST00000565442 TRBV4-1A0A0J9YWV2 114 aa3.92□□□□□ -1.78
CHD9-215ENST00000565442 KBTBD13C9JR72 458 aa3.92□□□□□ -1.78
CHD9-215ENST00000565442 E5RGE8 158 aa3.92□□□□□ -1.78
CHD9-215ENST00000565442 SEC24AO95486 1093 aa3.92□□□□□ -1.78
CHD9-215ENST00000565442 SLC2A2P11168 524 aaPredicted RBP3.92□□□□□ -1.78
CHD9-215ENST00000565442 EEF2P13639 858 aaKnown RBP3.92□□□□□ -1.78
CHD9-215ENST00000565442 PIK3R1P27986 724 aa3.92□□□□□ -1.78
CHD9-215ENST00000565442 NPBWR1P48145 328 aa3.92□□□□□ -1.78
CHD9-215ENST00000565442 ST8SIA6P61647 398 aa3.92□□□□□ -1.78
CHD9-215ENST00000565442 TEAD2Q15562 447 aa3.92□□□□□ -1.78
CHD9-215ENST00000565442 ZNF74Q16587 644 aa3.92□□□□□ -1.78
CHD9-215ENST00000565442 ZNF674Q2M3X9 581 aa3.92□□□□□ -1.78
CHD9-215ENST00000565442 PSRC1Q6PGN9 363 aaPredicted RBP3.92□□□□□ -1.78
CHD9-215ENST00000565442 BHLHB9Q6PI77 547 aa3.92□□□□□ -1.78
CHD9-215ENST00000565442 SLC24A5Q71RS6 500 aa3.92□□□□□ -1.78
CHD9-215ENST00000565442 CPEB2Q7Z5Q1 589 aaKnown RBP3.92□□□□□ -1.78
CHD9-215ENST00000565442 PTAR1Q7Z6K3 402 aaPredicted RBP3.92□□□□□ -1.78
CHD9-215ENST00000565442 MEX3DQ86XN8 651 aaKnown RBP3.92□□□□□ -1.78
CHD9-215ENST00000565442 DCLK2Q8N568 766 aa3.92□□□□□ -1.78
CHD9-215ENST00000565442 GBP7Q8N8V2 638 aaPredicted RBP3.92□□□□□ -1.78
CHD9-215ENST00000565442 KIAA0895Q8NCT3 520 aa3.92□□□□□ -1.78
CHD9-215ENST00000565442 UBLCP1Q8WVY7 318 aaPredicted RBP3.92□□□□□ -1.78
CHD9-215ENST00000565442 TAF15Q92804 592 aaKnown RBP eCLIP3.92□□□□□ -1.78
CHD9-215ENST00000565442 TEKT1Q969V4 418 aa3.92□□□□□ -1.78
CHD9-215ENST00000565442 LRR1Q96L50 414 aa3.92□□□□□ -1.78
CHD9-215ENST00000565442 LPAR4Q99677 370 aa3.92□□□□□ -1.78
CHD9-215ENST00000565442 DNAI2Q9GZS0 605 aa3.92□□□□□ -1.78
CHD9-215ENST00000565442 SCRT2Q9NQ03 307 aa3.92□□□□□ -1.78
CHD9-215ENST00000565442 ABCB8Q9NUT2 735 aa3.92□□□□□ -1.78
CHD9-215ENST00000565442 CWC25Q9NXE8 425 aaPredicted RBP3.92□□□□□ -1.78
CHD9-215ENST00000565442 NOCTQ9UK39 431 aaKnown RBP3.92□□□□□ -1.78
CHD9-215ENST00000565442 LIPT1Q9Y234 373 aa3.92□□□□□ -1.78
CHD9-215ENST00000565442 MRPS28Q9Y2Q9 187 aaKnown RBP3.92□□□□□ -1.78
CHD9-215ENST00000565442 NSG2Q9Y328 171 aa3.92□□□□□ -1.78
CHD9-215ENST00000565442 PYGO1Q9Y3Y4 419 aa3.92□□□□□ -1.78
CHD9-215ENST00000565442 IL16Q14005 1332 aa3.92□□□□□ -1.78
CHD9-215ENST00000565442 ARID2Q68CP9 1835 aa3.91□□□□□ -1.78
CHD9-215ENST00000565442 MYH14Q7Z406 1995 aaKnown RBP3.91□□□□□ -1.78
CHD9-215ENST00000565442 ERI2A8K979 691 aaKnown RBP3.91□□□□□ -1.78
CHD9-215ENST00000565442 SLC33A1O00400 549 aaPredicted RBP3.91□□□□□ -1.78
CHD9-215ENST00000565442 FMO6PO60774 539 aa3.91□□□□□ -1.78
CHD9-215ENST00000565442 PAK4O96013 591 aaPredicted RBP3.91□□□□□ -1.78
CHD9-215ENST00000565442 GH1P01241 217 aa3.91□□□□□ -1.78
CHD9-215ENST00000565442 CD59P13987 128 aa3.91□□□□□ -1.78
CHD9-215ENST00000565442 OR3A1P47881 315 aa3.91□□□□□ -1.78
CHD9-215ENST00000565442 GLIPR1P48060 266 aa3.91□□□□□ -1.78
CHD9-215ENST00000565442 KRTAP10-3P60369 221 aa3.91□□□□□ -1.78
CHD9-215ENST00000565442 SNRPD1P62314 119 aaKnown RBP3.91□□□□□ -1.78
CHD9-215ENST00000565442 TRIM29Q14134 588 aa3.91□□□□□ -1.78
CHD9-215ENST00000565442 RCN2Q14257 317 aa3.91□□□□□ -1.78
CHD9-215ENST00000565442 ZNF542PQ5EBM4 170 aa3.91□□□□□ -1.78
CHD9-215ENST00000565442 ARHGAP11AQ6P4F7 1023 aa3.91□□□□□ -1.78
CHD9-215ENST00000565442 IYDQ6PHW0 289 aa3.91□□□□□ -1.78
CHD9-215ENST00000565442 NHLRC1Q6VVB1 395 aa3.91□□□□□ -1.78
CHD9-215ENST00000565442 Q6ZSR9 355 aa3.91□□□□□ -1.78
CHD9-215ENST00000565442 ANKRD46Q86W74 232 aa3.91□□□□□ -1.78
CHD9-215ENST00000565442 CCDC60Q8IWA6 550 aaPredicted RBP3.91□□□□□ -1.78
CHD9-215ENST00000565442 RAB42Q8N4Z0 105 aa3.91□□□□□ -1.78
CHD9-215ENST00000565442 DDHD1Q8NEL9 900 aa3.91□□□□□ -1.78
CHD9-215ENST00000565442 OR5AP2Q8NGF4 316 aa3.91□□□□□ -1.78
CHD9-215ENST00000565442 OR10G8Q8NGN5 311 aa3.91□□□□□ -1.78
CHD9-215ENST00000565442 SMAP2Q8WU79 429 aaPredicted RBP3.91□□□□□ -1.78
CHD9-215ENST00000565442 AZIN2Q96A70 460 aa3.91□□□□□ -1.78
CHD9-215ENST00000565442 LGALS12Q96DT0 336 aa3.91□□□□□ -1.78
CHD9-215ENST00000565442 LITAFQ99732 161 aa3.91□□□□□ -1.78
CHD9-215ENST00000565442 NKX3-1Q99801 234 aaPredicted RBP3.91□□□□□ -1.78
CHD9-215ENST00000565442 ALKBH7Q9BT30 221 aaPredicted RBP3.91□□□□□ -1.78
CHD9-215ENST00000565442 FUCA2Q9BTY2 467 aa3.91□□□□□ -1.78
CHD9-215ENST00000565442 CACNG6Q9BXT2 260 aa3.91□□□□□ -1.78
CHD9-215ENST00000565442 PITPNM3Q9BZ71 974 aa3.91□□□□□ -1.78
CHD9-215ENST00000565442 P2RY12Q9H244 342 aa3.91□□□□□ -1.78
CHD9-215ENST00000565442 EGLN3Q9H6Z9 239 aa3.91□□□□□ -1.78
CHD9-215ENST00000565442 SRD5A3Q9H8P0 318 aa3.91□□□□□ -1.78
CHD9-215ENST00000565442 MAN2C1Q9NTJ4 1040 aa3.91□□□□□ -1.78
CHD9-215ENST00000565442 DNAJC17Q9NVM6 304 aaKnown RBP3.91□□□□□ -1.78
CHD9-215ENST00000565442 SLCO1C1Q9NYB5 712 aa3.91□□□□□ -1.78
CHD9-215ENST00000565442 CNIH4Q9P003 139 aa3.91□□□□□ -1.78
CHD9-215ENST00000565442 FBXL5Q9UKA1 691 aa3.91□□□□□ -1.78
CHD9-215ENST00000565442 PRDM4Q9UKN5 801 aa3.91□□□□□ -1.78
CHD9-215ENST00000565442 GPR132Q9UNW8 380 aa3.91□□□□□ -1.78
CHD9-215ENST00000565442 WDR37Q9Y2I8 494 aa3.91□□□□□ -1.78
CHD9-215ENST00000565442 ANGPTL3Q9Y5C1 460 aa3.91□□□□□ -1.78
CHD9-215ENST00000565442 ACEP12821 1306 aa3.91□□□□□ -1.78
CHD9-215ENST00000565442 A0A087WUV0 522 aaPredicted RBP3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms