RNA–Protein interactions for RNA: ENST00000564969.5

FANCA-217, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 850 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-217ENST00000564969 SPNS1Q9H2V7 528 aa10.84□□□□□ -0.67
FANCA-217ENST00000564969 WDR55Q9H6Y2 383 aaPredicted RBP10.84□□□□□ -0.67
FANCA-217ENST00000564969 TCF7L2Q9NQB0 619 aa10.84□□□□□ -0.67
FANCA-217ENST00000564969 PDP2Q9P2J9 529 aa10.84□□□□□ -0.67
FANCA-217ENST00000564969 ZFP69BQ9UJL9 534 aa10.84□□□□□ -0.67
FANCA-217ENST00000564969 PILRAQ9UKJ1 303 aa10.84□□□□□ -0.67
FANCA-217ENST00000564969 BTRCQ9Y297 605 aa10.84□□□□□ -0.67
FANCA-217ENST00000564969 KLHL20Q9Y2M5 609 aa10.84□□□□□ -0.67
FANCA-217ENST00000564969 MN1Q10571 1320 aaPredicted RBP10.84□□□□□ -0.67
FANCA-217ENST00000564969 A0A1W2PQM1 296 aa10.83□□□□□ -0.68
FANCA-217ENST00000564969 LCMT2O60294 686 aaKnown RBP10.83□□□□□ -0.68
FANCA-217ENST00000564969 SRPX2O60687 465 aaPredicted RBP10.83□□□□□ -0.68
FANCA-217ENST00000564969 CBFA2T3O75081 653 aa10.83□□□□□ -0.68
FANCA-217ENST00000564969 RSL1D1O76021 490 aaKnown RBP10.83□□□□□ -0.68
FANCA-217ENST00000564969 ZBTB11O95625 1053 aaPredicted RBP10.83□□□□□ -0.68
FANCA-217ENST00000564969 RPLP0P05388 317 aaKnown RBP10.83□□□□□ -0.68
FANCA-217ENST00000564969 JUNP05412 331 aaKnown RBP10.83□□□□□ -0.68
FANCA-217ENST00000564969 PCSK2P16519 638 aa10.83□□□□□ -0.68
FANCA-217ENST00000564969 PRPH2P23942 346 aa10.83□□□□□ -0.68
FANCA-217ENST00000564969 EPHA3P29320 983 aa10.83□□□□□ -0.68
FANCA-217ENST00000564969 PPP1CAP62136 330 aa10.83□□□□□ -0.68
FANCA-217ENST00000564969 IRX1P78414 480 aaPredicted RBP10.83□□□□□ -0.68
FANCA-217ENST00000564969 CCL7P80098 99 aa10.83□□□□□ -0.68
FANCA-217ENST00000564969 E2F1Q01094 437 aa10.83□□□□□ -0.68
FANCA-217ENST00000564969 CFHR1Q03591 330 aa10.83□□□□□ -0.68
FANCA-217ENST00000564969 ILKQ13418 452 aa10.83□□□□□ -0.68
FANCA-217ENST00000564969 IMPG1Q17R60 797 aa10.83□□□□□ -0.68
FANCA-217ENST00000564969 LSM12Q3MHD2 195 aaKnown RBP10.83□□□□□ -0.68
FANCA-217ENST00000564969 ZC3H12BQ5HYM0 836 aaKnown RBP10.83□□□□□ -0.68
FANCA-217ENST00000564969 MANEAQ5SRI9 462 aa10.83□□□□□ -0.68
FANCA-217ENST00000564969 CACHD1Q5VU97 1274 aa10.83□□□□□ -0.68
FANCA-217ENST00000564969 SCIMPQ6UWF3 145 aa10.83□□□□□ -0.68
FANCA-217ENST00000564969 FAM92BQ6ZTR7 304 aa10.83□□□□□ -0.68
FANCA-217ENST00000564969 CHSY3Q70JA7 882 aa10.83□□□□□ -0.68
FANCA-217ENST00000564969 PRSS42Q7Z5A4 293 aa10.83□□□□□ -0.68
FANCA-217ENST00000564969 KMT5CQ86Y97 462 aa10.83□□□□□ -0.68
FANCA-217ENST00000564969 CACNA2D3Q8IZS8 1091 aa10.83□□□□□ -0.68
FANCA-217ENST00000564969 ANKRD53Q8N9V6 530 aa10.83□□□□□ -0.68
FANCA-217ENST00000564969 OR4D9Q8NGE8 314 aa10.83□□□□□ -0.68
FANCA-217ENST00000564969 TUBGCP3Q96CW5 907 aa10.83□□□□□ -0.68
FANCA-217ENST00000564969 CMTM7Q96FZ5 175 aa10.83□□□□□ -0.68
FANCA-217ENST00000564969 C3orf30Q96M34 536 aa10.83□□□□□ -0.68
FANCA-217ENST00000564969 PPM1MQ96MI6 270 aa10.83□□□□□ -0.68
FANCA-217ENST00000564969 OR2A5Q96R48 311 aa10.83□□□□□ -0.68
FANCA-217ENST00000564969 MTERF1Q99551 399 aaKnown RBP10.83□□□□□ -0.68
FANCA-217ENST00000564969 ZFYVE21Q9BQ24 234 aa10.83□□□□□ -0.68
FANCA-217ENST00000564969 EBF4Q9BQW3 602 aa10.83□□□□□ -0.68
FANCA-217ENST00000564969 AKTIPQ9H8T0 292 aa10.83□□□□□ -0.68
FANCA-217ENST00000564969 DMRT3Q9NQL9 472 aa10.83□□□□□ -0.68
FANCA-217ENST00000564969 FARSBQ9NSD9 589 aaKnown RBP10.83□□□□□ -0.68
FANCA-217ENST00000564969 AHSPQ9NZD4 102 aa10.83□□□□□ -0.68
FANCA-217ENST00000564969 VPS29Q9UBQ0 182 aa10.83□□□□□ -0.68
FANCA-217ENST00000564969 TRIM33Q9UPN9 1127 aa10.83□□□□□ -0.68
FANCA-217ENST00000564969 CCL27Q9Y4X3 112 aa10.83□□□□□ -0.68
FANCA-217ENST00000564969 PCDHGA4Q9Y5G9 962 aa10.83□□□□□ -0.68
FANCA-217ENST00000564969 AP1M2Q9Y6Q5 423 aa10.83□□□□□ -0.68
FANCA-217ENST00000564969 GOLGA8QA0A0J9YX86 632 aa10.82□□□□□ -0.68
FANCA-217ENST00000564969 FEZF1A0PJY2 475 aa10.82□□□□□ -0.68
FANCA-217ENST00000564969 GOLGA8OA6NCC3 632 aa10.82□□□□□ -0.68
FANCA-217ENST00000564969 MAGEB17A8MXT2 336 aa10.82□□□□□ -0.68
FANCA-217ENST00000564969 GOLGA8NF8WBI6 632 aa10.82□□□□□ -0.68
FANCA-217ENST00000564969 NTN3O00634 580 aaPredicted RBP10.82□□□□□ -0.68
FANCA-217ENST00000564969 TXNDC9O14530 226 aa10.82□□□□□ -0.68
FANCA-217ENST00000564969 HAT1O14929 419 aa10.82□□□□□ -0.68
FANCA-217ENST00000564969 KIF1CO43896 1103 aaKnown RBP10.82□□□□□ -0.68
FANCA-217ENST00000564969 CCDC22O60826 627 aa10.82□□□□□ -0.68
FANCA-217ENST00000564969 SERPINA6P08185 405 aa10.82□□□□□ -0.68
FANCA-217ENST00000564969 PRR35P0CG20 571 aa10.82□□□□□ -0.68
FANCA-217ENST00000564969 PVRP15151 417 aa10.82□□□□□ -0.68
FANCA-217ENST00000564969 ST6GAL1P15907 406 aa10.82□□□□□ -0.68
FANCA-217ENST00000564969 LBPP18428 481 aa10.82□□□□□ -0.68
FANCA-217ENST00000564969 BCL6P41182 706 aa10.82□□□□□ -0.68
FANCA-217ENST00000564969 ARL4DP49703 201 aa10.82□□□□□ -0.68
FANCA-217ENST00000564969 ARFIP1P53367 373 aa10.82□□□□□ -0.68
FANCA-217ENST00000564969 LIMK1P53667 647 aa10.82□□□□□ -0.68
FANCA-217ENST00000564969 GFERP55789 205 aa10.82□□□□□ -0.68
FANCA-217ENST00000564969 RPS13P62277 151 aaKnown RBP10.82□□□□□ -0.68
FANCA-217ENST00000564969 HSD11B2P80365 405 aa10.82□□□□□ -0.68
FANCA-217ENST00000564969 EMX2Q04743 252 aa10.82□□□□□ -0.68
FANCA-217ENST00000564969 SF3A3Q12874 501 aaKnown RBP eCLIP10.82□□□□□ -0.685e-9■■■□□ 18.5
FANCA-217ENST00000564969 MAD2L1Q13257 205 aaPredicted RBP10.82□□□□□ -0.68
FANCA-217ENST00000564969 PWP1Q13610 501 aa10.82□□□□□ -0.68
FANCA-217ENST00000564969 CUL3Q13618 768 aa10.82□□□□□ -0.68
FANCA-217ENST00000564969 DDX39BQ13838 428 aaKnown RBP10.82□□□□□ -0.68
FANCA-217ENST00000564969 ZIC1Q15915 447 aa10.82□□□□□ -0.68
FANCA-217ENST00000564969 AP5B1Q2VPB7 878 aa10.82□□□□□ -0.68
FANCA-217ENST00000564969 ATP6AP1LQ52LC2 224 aa10.82□□□□□ -0.68
FANCA-217ENST00000564969 TMEM35AQ53FP2 167 aa10.82□□□□□ -0.68
FANCA-217ENST00000564969 C6orf136Q5SQH8 315 aa10.82□□□□□ -0.68
FANCA-217ENST00000564969 DEPDC1Q5TB30 811 aa10.82□□□□□ -0.68
FANCA-217ENST00000564969 STPG1Q5TH74 334 aa10.82□□□□□ -0.68
FANCA-217ENST00000564969 NXNQ6DKJ4 435 aa10.82□□□□□ -0.68
FANCA-217ENST00000564969 OGFOD2Q6N063 350 aa10.82□□□□□ -0.68
FANCA-217ENST00000564969 RNF44Q7L0R7 432 aa10.82□□□□□ -0.68
FANCA-217ENST00000564969 SPATA19Q7Z5L4 167 aa10.82□□□□□ -0.68
FANCA-217ENST00000564969 PLD3Q8IV08 490 aa10.82□□□□□ -0.68
FANCA-217ENST00000564969 DNAJC22Q8N4W6 341 aa10.82□□□□□ -0.68
FANCA-217ENST00000564969 C19orf47Q8N9M1 422 aaKnown RBP10.82□□□□□ -0.68
FANCA-217ENST00000564969 CREB3L4Q8TEY5 395 aa10.82□□□□□ -0.68
FANCA-217ENST00000564969 SLC13A3Q8WWT9 602 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms