RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 KRT78Q8N1N4 520 aa10.65□□□□□ -0.7
SF3B3-205ENST00000564899 ZNF843Q8N446 348 aa10.65□□□□□ -0.7
SF3B3-205ENST00000564899 EID2Q8N6I1 236 aa10.65□□□□□ -0.7
SF3B3-205ENST00000564899 FAM181AQ8N9Y4 354 aa10.65□□□□□ -0.7
SF3B3-205ENST00000564899 ABHD11Q8NFV4 315 aa10.65□□□□□ -0.7
SF3B3-205ENST00000564899 SELENOMQ8WWX9 145 aa10.65□□□□□ -0.7
SF3B3-205ENST00000564899 APOLD1Q96LR9 279 aa10.65□□□□□ -0.7
SF3B3-205ENST00000564899 RILPQ96NA2 401 aa10.65□□□□□ -0.7
SF3B3-205ENST00000564899 OR2A14Q96R47 310 aa10.65□□□□□ -0.7
SF3B3-205ENST00000564899 AIF1LQ9BQI0 150 aa10.65□□□□□ -0.7
SF3B3-205ENST00000564899 TUBB1Q9H4B7 451 aa10.65□□□□□ -0.7
SF3B3-205ENST00000564899 MEAF6Q9HAF1 191 aa10.65□□□□□ -0.7
SF3B3-205ENST00000564899 PRM3Q9NNZ6 103 aa10.65□□□□□ -0.7
SF3B3-205ENST00000564899 SLC6A20Q9NP91 592 aa10.65□□□□□ -0.7
SF3B3-205ENST00000564899 GEMIN8Q9NWZ8 242 aaKnown RBP10.65□□□□□ -0.7
SF3B3-205ENST00000564899 PADI4Q9UM07 663 aa10.65□□□□□ -0.7
SF3B3-205ENST00000564899 PTGDR2Q9Y5Y4 395 aa10.65□□□□□ -0.7
SF3B3-205ENST00000564899 TDRD6O60522 2096 aaKnown RBP10.65□□□□□ -0.7
SF3B3-205ENST00000564899 BOD1L1Q8NFC6 3051 aa10.65□□□□□ -0.7
SF3B3-205ENST00000564899 ARHGEF17Q96PE2 2063 aaPredicted RBP10.64□□□□□ -0.71
SF3B3-205ENST00000564899 GOLGA8QA0A0J9YX86 632 aa10.64□□□□□ -0.71
SF3B3-205ENST00000564899 GOLGA8OA6NCC3 632 aa10.64□□□□□ -0.71
SF3B3-205ENST00000564899 GOLGA8NF8WBI6 632 aa10.64□□□□□ -0.71
SF3B3-205ENST00000564899 H0YIV9 168 aa10.64□□□□□ -0.71
SF3B3-205ENST00000564899 H7BY64 318 aa10.64□□□□□ -0.71
SF3B3-205ENST00000564899 ULK1O75385 1050 aa10.64□□□□□ -0.71
SF3B3-205ENST00000564899 FKBP9O95302 570 aa10.64□□□□□ -0.71
SF3B3-205ENST00000564899 LINC00032P0C843 101 aa10.64□□□□□ -0.71
SF3B3-205ENST00000564899 ZNF883P0CG24 379 aa10.64□□□□□ -0.71
SF3B3-205ENST00000564899 PCNAP12004 261 aa10.64□□□□□ -0.71
SF3B3-205ENST00000564899 CXCR2P25025 360 aa10.64□□□□□ -0.71
SF3B3-205ENST00000564899 EPHA3P29320 983 aa10.64□□□□□ -0.71
SF3B3-205ENST00000564899 CSNK1G2P78368 415 aa10.64□□□□□ -0.71
SF3B3-205ENST00000564899 REEP5Q00765 189 aa10.64□□□□□ -0.71
SF3B3-205ENST00000564899 MEF2AQ02078 507 aaPredicted RBP10.64□□□□□ -0.71
SF3B3-205ENST00000564899 C19orf57Q0VDD7 668 aa10.64□□□□□ -0.71
SF3B3-205ENST00000564899 ABRAXAS2Q15018 415 aa10.64□□□□□ -0.71
SF3B3-205ENST00000564899 SUZ12Q15022 739 aaKnown RBP10.64□□□□□ -0.71
SF3B3-205ENST00000564899 SLC5A12Q1EHB4 618 aa10.64□□□□□ -0.71
SF3B3-205ENST00000564899 INAVAQ3KP66 663 aa10.64□□□□□ -0.71
SF3B3-205ENST00000564899 KIAA1614Q5VZ46 1190 aa10.64□□□□□ -0.71
SF3B3-205ENST00000564899 FRG2Q64ET8 278 aa10.64□□□□□ -0.71
SF3B3-205ENST00000564899 NXNQ6DKJ4 435 aa10.64□□□□□ -0.71
SF3B3-205ENST00000564899 MED27Q6P2C8 311 aa10.64□□□□□ -0.71
SF3B3-205ENST00000564899 SPESP1Q6UW49 350 aa10.64□□□□□ -0.71
SF3B3-205ENST00000564899 RNF165Q6ZSG1 346 aa10.64□□□□□ -0.71
SF3B3-205ENST00000564899 ZNF438Q7Z4V0 828 aa10.64□□□□□ -0.71
SF3B3-205ENST00000564899 FAM129CQ86XR2 697 aa10.64□□□□□ -0.71
SF3B3-205ENST00000564899 ANKS4BQ8N8V4 417 aa10.64□□□□□ -0.71
SF3B3-205ENST00000564899 OR6C4Q8NGE1 309 aa10.64□□□□□ -0.71
SF3B3-205ENST00000564899 FLVCR1-AS1Q8TAF5 88 aa10.64□□□□□ -0.71
SF3B3-205ENST00000564899 STON2Q8WXE9 905 aa10.64□□□□□ -0.71
SF3B3-205ENST00000564899 USP7Q93009 1102 aa10.64□□□□□ -0.71
SF3B3-205ENST00000564899 UBE2E3Q969T4 207 aa10.64□□□□□ -0.71
SF3B3-205ENST00000564899 REPS1Q96D71 796 aa10.64□□□□□ -0.71
SF3B3-205ENST00000564899 PRAP1Q96NZ9 151 aa10.64□□□□□ -0.71
SF3B3-205ENST00000564899 FRG2BQ96QU4 278 aa10.64□□□□□ -0.71
SF3B3-205ENST00000564899 OR52B2Q96RD2 323 aa10.64□□□□□ -0.71
SF3B3-205ENST00000564899 UBL7Q96S82 380 aaPredicted RBP10.64□□□□□ -0.71
SF3B3-205ENST00000564899 HBEGFQ99075 208 aa10.64□□□□□ -0.71
SF3B3-205ENST00000564899 CCT7Q99832 543 aa10.64□□□□□ -0.71
SF3B3-205ENST00000564899 DPH7Q9BTV6 452 aa10.64□□□□□ -0.71
SF3B3-205ENST00000564899 SPNS1Q9H2V7 528 aa10.64□□□□□ -0.71
SF3B3-205ENST00000564899 PRORYQ9H606 182 aa10.64□□□□□ -0.71
SF3B3-205ENST00000564899 WDR55Q9H6Y2 383 aaPredicted RBP10.64□□□□□ -0.71
SF3B3-205ENST00000564899 TCF7L2Q9NQB0 619 aa10.64□□□□□ -0.71
SF3B3-205ENST00000564899 FARSBQ9NSD9 589 aaKnown RBP10.64□□□□□ -0.71
SF3B3-205ENST00000564899 RIC8BQ9NVN3 520 aa10.64□□□□□ -0.71
SF3B3-205ENST00000564899 POMT2Q9UKY4 750 aa10.64□□□□□ -0.71
SF3B3-205ENST00000564899 ZNF490Q9ULM2 529 aaPredicted RBP10.64□□□□□ -0.71
SF3B3-205ENST00000564899 PCDHGB2Q9Y5G2 931 aa10.64□□□□□ -0.71
SF3B3-205ENST00000564899 PCDHGA11Q9Y5H2 935 aa10.64□□□□□ -0.71
SF3B3-205ENST00000564899 PTPN13Q12923 2485 aa10.64□□□□□ -0.71
SF3B3-205ENST00000564899 PIEZO2Q9H5I5 2752 aa10.63□□□□□ -0.71
SF3B3-205ENST00000564899 IGKV1-8A0A0C4DH67 115 aa10.63□□□□□ -0.71
SF3B3-205ENST00000564899 LY6G6EA0A0G2JKS1 128 aa10.63□□□□□ -0.71
SF3B3-205ENST00000564899 A0A0J9YY10 115 aa10.63□□□□□ -0.71
SF3B3-205ENST00000564899 SLC28A1O00337 649 aa10.63□□□□□ -0.71
SF3B3-205ENST00000564899 ATXN7O15265 892 aaPredicted RBP10.63□□□□□ -0.71
SF3B3-205ENST00000564899 DUX1O43812 170 aa10.63□□□□□ -0.71
SF3B3-205ENST00000564899 PDYNP01213 254 aa10.63□□□□□ -0.71
SF3B3-205ENST00000564899 HRH2P25021 359 aa10.63□□□□□ -0.71
SF3B3-205ENST00000564899 ALDH4A1P30038 563 aa10.63□□□□□ -0.71
SF3B3-205ENST00000564899 GRK3P35626 688 aa10.63□□□□□ -0.71
SF3B3-205ENST00000564899 EIF2S3P41091 472 aaKnown RBP10.63□□□□□ -0.71
SF3B3-205ENST00000564899 GPR3P46089 330 aa10.63□□□□□ -0.71
SF3B3-205ENST00000564899 NEK2P51955 445 aa10.63□□□□□ -0.71
SF3B3-205ENST00000564899 OR1D5P58170 312 aa10.63□□□□□ -0.71
SF3B3-205ENST00000564899 PPP1CAP62136 330 aa10.63□□□□□ -0.71
SF3B3-205ENST00000564899 DDX39BQ13838 428 aaKnown RBP10.63□□□□□ -0.71
SF3B3-205ENST00000564899 NR1D2Q14995 579 aa10.63□□□□□ -0.71
SF3B3-205ENST00000564899 NAA25Q14CX7 972 aa10.63□□□□□ -0.71
SF3B3-205ENST00000564899 RBBP5Q15291 538 aaKnown RBP10.63□□□□□ -0.71
SF3B3-205ENST00000564899 IMPG1Q17R60 797 aa10.63□□□□□ -0.71
SF3B3-205ENST00000564899 XKR7Q5GH72 579 aa10.63□□□□□ -0.71
SF3B3-205ENST00000564899 IRGCQ6NXR0 463 aa10.63□□□□□ -0.71
SF3B3-205ENST00000564899 TMIGD1Q6UXZ0 262 aa10.63□□□□□ -0.71
SF3B3-205ENST00000564899 LAS2Q8IYD9 372 aa10.63□□□□□ -0.71
SF3B3-205ENST00000564899 TBC1D19Q8N5T2 526 aa10.63□□□□□ -0.71
SF3B3-205ENST00000564899 Q8N9G6 341 aaPredicted RBP10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms