RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 PEX13Q92968 403 aa19.82■□□□□ 0.76
MAP1LC3B-206ENST00000564844 OR2A14Q96R47 310 aa19.82■□□□□ 0.76
MAP1LC3B-206ENST00000564844 MGLLQ99685 303 aa19.82■□□□□ 0.76
MAP1LC3B-206ENST00000564844 TNFRSF10AO00220 468 aa19.82■□□□□ 0.76
MAP1LC3B-206ENST00000564844 EIF3FO00303 357 aaPredicted RBP19.82■□□□□ 0.76
MAP1LC3B-206ENST00000564844 RGS13O14921 159 aa19.82■□□□□ 0.76
MAP1LC3B-206ENST00000564844 GBAP04062 536 aa19.82■□□□□ 0.76
MAP1LC3B-206ENST00000564844 RGS4P49798 205 aa19.82■□□□□ 0.76
MAP1LC3B-206ENST00000564844 CLDN8P56748 225 aa19.82■□□□□ 0.76
MAP1LC3B-206ENST00000564844 SPIBQ01892 262 aa19.82■□□□□ 0.76
MAP1LC3B-206ENST00000564844 PRKCDQ05655 676 aa19.82■□□□□ 0.76
MAP1LC3B-206ENST00000564844 FAM124AQ86V42 546 aa19.82■□□□□ 0.76
MAP1LC3B-206ENST00000564844 ABCB8Q9NUT2 735 aa19.82■□□□□ 0.76
MAP1LC3B-206ENST00000564844 MEIOCA2RUB1 952 aa19.81■□□□□ 0.76
MAP1LC3B-206ENST00000564844 UNCXA6NJT0 531 aa19.81■□□□□ 0.76
MAP1LC3B-206ENST00000564844 MAGEB17A8MXT2 336 aa19.81■□□□□ 0.76
MAP1LC3B-206ENST00000564844 RFXAPO00287 272 aa19.81■□□□□ 0.76
MAP1LC3B-206ENST00000564844 KRT6AP02538 564 aa19.81■□□□□ 0.76
MAP1LC3B-206ENST00000564844 KRT6BP04259 564 aa19.81■□□□□ 0.76
MAP1LC3B-206ENST00000564844 LAMP1P11279 417 aa19.81■□□□□ 0.76
MAP1LC3B-206ENST00000564844 RPS19P39019 145 aaKnown RBP19.81■□□□□ 0.76
MAP1LC3B-206ENST00000564844 KRT6CP48668 564 aa19.81■□□□□ 0.76
MAP1LC3B-206ENST00000564844 GALK2Q01415 458 aa19.81■□□□□ 0.76
MAP1LC3B-206ENST00000564844 ABI3BPQ7Z7G0 1075 aa19.81■□□□□ 0.76
MAP1LC3B-206ENST00000564844 RAB43Q86YS6 212 aa19.81■□□□□ 0.76
MAP1LC3B-206ENST00000564844 CAMKK1Q8N5S9 505 aa19.81■□□□□ 0.76
MAP1LC3B-206ENST00000564844 HRASLS5Q96KN8 279 aa19.81■□□□□ 0.76
MAP1LC3B-206ENST00000564844 ABCB9Q9NP78 766 aa19.81■□□□□ 0.76
MAP1LC3B-206ENST00000564844 NMRK2Q9NPI5 230 aa19.81■□□□□ 0.76
MAP1LC3B-206ENST00000564844 MALT1Q9UDY8 824 aa19.81■□□□□ 0.76
MAP1LC3B-206ENST00000564844 SMLR1H3BR10 107 aa19.81■□□□□ 0.76
MAP1LC3B-206ENST00000564844 GPX5O75715 221 aa19.81■□□□□ 0.76
MAP1LC3B-206ENST00000564844 RFX2P48378 723 aa19.81■□□□□ 0.76
MAP1LC3B-206ENST00000564844 YBEYP58557 167 aaPredicted RBP19.81■□□□□ 0.76
MAP1LC3B-206ENST00000564844 CDK10Q15131 360 aa19.81■□□□□ 0.76
MAP1LC3B-206ENST00000564844 LRRC73Q5JTD7 316 aa19.81■□□□□ 0.76
MAP1LC3B-206ENST00000564844 MFSD14CQ5VZR4 134 aa19.81■□□□□ 0.76
MAP1LC3B-206ENST00000564844 RNF219Q5W0B1 726 aaPredicted RBP19.81■□□□□ 0.76
MAP1LC3B-206ENST00000564844 OR10G2Q8NGC3 310 aa19.81■□□□□ 0.76
MAP1LC3B-206ENST00000564844 CHAC2Q8WUX2 184 aa19.81■□□□□ 0.76
MAP1LC3B-206ENST00000564844 COQ8BQ96D53 544 aa19.81■□□□□ 0.76
MAP1LC3B-206ENST00000564844 CCDC177Q9NQR7 707 aaPredicted RBP19.81■□□□□ 0.76
MAP1LC3B-206ENST00000564844 ZNF226Q9NYT6 803 aa19.81■□□□□ 0.76
MAP1LC3B-206ENST00000564844 FZD4Q9ULV1 537 aa19.81■□□□□ 0.76
MAP1LC3B-206ENST00000564844 SLC22A14Q9Y267 594 aa19.81■□□□□ 0.76
MAP1LC3B-206ENST00000564844 VPS9D1Q9Y2B5 631 aa19.81■□□□□ 0.76
MAP1LC3B-206ENST00000564844 A0A1W2PQ09 198 aa19.8■□□□□ 0.76
MAP1LC3B-206ENST00000564844 WDR47O94967 919 aa19.8■□□□□ 0.76
MAP1LC3B-206ENST00000564844 RHOCP08134 193 aa19.8■□□□□ 0.76
MAP1LC3B-206ENST00000564844 UGT2B10P36537 528 aa19.8■□□□□ 0.76
MAP1LC3B-206ENST00000564844 RPIAP49247 311 aa19.8■□□□□ 0.76
MAP1LC3B-206ENST00000564844 HOXC5Q00444 222 aa19.8■□□□□ 0.76
MAP1LC3B-206ENST00000564844 TUSC3Q13454 348 aa19.8■□□□□ 0.76
MAP1LC3B-206ENST00000564844 ZXDCQ2QGD7 858 aaPredicted RBP19.8■□□□□ 0.76
MAP1LC3B-206ENST00000564844 ZNF438Q7Z4V0 828 aa19.8■□□□□ 0.76
MAP1LC3B-206ENST00000564844 ZSWIM9Q86XI8 627 aa19.8■□□□□ 0.76
MAP1LC3B-206ENST00000564844 PLPP6Q8IY26 295 aa19.8■□□□□ 0.76
MAP1LC3B-206ENST00000564844 SIGLEC11Q96RL6 698 aa19.8■□□□□ 0.76
MAP1LC3B-206ENST00000564844 CLEC2DQ9UHP7 191 aa19.8■□□□□ 0.76
MAP1LC3B-206ENST00000564844 ARHGAP33O14559 1287 aa19.8■□□□□ 0.76
MAP1LC3B-206ENST00000564844 SUV39H1O43463 412 aa19.8■□□□□ 0.76
MAP1LC3B-206ENST00000564844 CLDN7O95471 211 aa19.8■□□□□ 0.76
MAP1LC3B-206ENST00000564844 CRYBA2P53672 197 aa19.8■□□□□ 0.76
MAP1LC3B-206ENST00000564844 UBE3AQ05086 875 aa19.8■□□□□ 0.76
MAP1LC3B-206ENST00000564844 ERAP2Q6P179 960 aa19.8■□□□□ 0.76
MAP1LC3B-206ENST00000564844 GPR156Q8NFN8 814 aa19.8■□□□□ 0.76
MAP1LC3B-206ENST00000564844 RPS6KA6Q9UK32 745 aa19.8■□□□□ 0.76
MAP1LC3B-206ENST00000564844 DRGXA6NNA5 263 aa19.79■□□□□ 0.76
MAP1LC3B-206ENST00000564844 PCDH7O60245 1069 aa19.79■□□□□ 0.76
MAP1LC3B-206ENST00000564844 GJB5O95377 273 aa19.79■□□□□ 0.76
MAP1LC3B-206ENST00000564844 IGFBP1P08833 259 aaPredicted RBP19.79■□□□□ 0.76
MAP1LC3B-206ENST00000564844 CRATP43155 626 aa19.79■□□□□ 0.76
MAP1LC3B-206ENST00000564844 PPIGQ13427 754 aaKnown RBP eCLIP19.79■□□□□ 0.76
MAP1LC3B-206ENST00000564844 DSC3Q14574 896 aa19.79■□□□□ 0.76
MAP1LC3B-206ENST00000564844 TBCEQ15813 527 aaPredicted RBP19.79■□□□□ 0.76
MAP1LC3B-206ENST00000564844 LEXMQ3ZCV2 418 aa19.79■□□□□ 0.76
MAP1LC3B-206ENST00000564844 CEP78Q5JTW2 689 aa19.79■□□□□ 0.76
MAP1LC3B-206ENST00000564844 LRIF1Q5T3J3 769 aa19.79■□□□□ 0.76
MAP1LC3B-206ENST00000564844 TUBA3EQ6PEY2 450 aa19.79■□□□□ 0.76
MAP1LC3B-206ENST00000564844 ASPNQ9BXN1 380 aa19.79■□□□□ 0.76
MAP1LC3B-206ENST00000564844 ADGRE3Q9BY15 652 aa19.79■□□□□ 0.76
MAP1LC3B-206ENST00000564844 P2RY12Q9H244 342 aa19.79■□□□□ 0.76
MAP1LC3B-206ENST00000564844 TPT1P8Q9HAU6 139 aa19.79■□□□□ 0.76
MAP1LC3B-206ENST00000564844 TMEM39AQ9NV64 488 aa19.79■□□□□ 0.76
MAP1LC3B-206ENST00000564844 SH3BP4Q9P0V3 963 aa19.79■□□□□ 0.76
MAP1LC3B-206ENST00000564844 HECAQ9UBI9 543 aaPredicted RBP19.79■□□□□ 0.76
MAP1LC3B-206ENST00000564844 HSPE1-MOB4S4R3N1 261 aa19.79■□□□□ 0.76
MAP1LC3B-206ENST00000564844 ZNF7P17097 686 aaPredicted RBP19.79■□□□□ 0.76
MAP1LC3B-206ENST00000564844 GPLD1P80108 840 aa19.79■□□□□ 0.76
MAP1LC3B-206ENST00000564844 STARD3Q14849 445 aa19.79■□□□□ 0.76
MAP1LC3B-206ENST00000564844 EXOC3L2Q2M3D2 409 aa19.79■□□□□ 0.76
MAP1LC3B-206ENST00000564844 SYCE2Q6PIF2 218 aa19.79■□□□□ 0.76
MAP1LC3B-206ENST00000564844 TRIM46Q7Z4K8 759 aa19.79■□□□□ 0.76
MAP1LC3B-206ENST00000564844 NAGSQ8N159 534 aa19.79■□□□□ 0.76
MAP1LC3B-206ENST00000564844 FBXO44Q9H4M3 255 aa19.79■□□□□ 0.76
MAP1LC3B-206ENST00000564844 C11orf16Q9NQ32 467 aa19.79■□□□□ 0.76
MAP1LC3B-206ENST00000564844 CRLS1Q9UJA2 301 aa19.79■□□□□ 0.76
MAP1LC3B-206ENST00000564844 TRPV2Q9Y5S1 764 aa19.79■□□□□ 0.76
MAP1LC3B-206ENST00000564844 MYO16Q9Y6X6 1858 aa19.79■□□□□ 0.76
MAP1LC3B-206ENST00000564844 OR6C70A6NIJ9 312 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms