RNA–Protein interactions for RNA: ENST00000564172.1

GDE1-203, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene GDE1, Length 2,238 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-203ENST00000564172 ITPKAP23677 461 aa17.09■□□□□ 0.33
GDE1-203ENST00000564172 HTR1BP28222 390 aa17.09■□□□□ 0.33
GDE1-203ENST00000564172 GNPDA1P46926 289 aa17.09■□□□□ 0.33
GDE1-203ENST00000564172 PXNP49023 591 aaPredicted RBP17.09■□□□□ 0.33
GDE1-203ENST00000564172 GNG2P59768 71 aa17.09■□□□□ 0.33
GDE1-203ENST00000564172 YPEL5P62699 121 aa17.09■□□□□ 0.33
GDE1-203ENST00000564172 SELENBP1Q13228 472 aa17.09■□□□□ 0.33
GDE1-203ENST00000564172 NAE1Q13564 534 aa17.09■□□□□ 0.33
GDE1-203ENST00000564172 TCHHL1Q5QJ38 904 aaPredicted RBP17.09■□□□□ 0.33
GDE1-203ENST00000564172 OR9A1PQ8NGU1 263 aa17.09■□□□□ 0.33
GDE1-203ENST00000564172 WDR92Q96MX6 357 aa17.09■□□□□ 0.33
GDE1-203ENST00000564172 CARS2Q9HA77 564 aaKnown RBP17.09■□□□□ 0.33
GDE1-203ENST00000564172 DNAJC11Q9NVH1 559 aa17.09■□□□□ 0.33
GDE1-203ENST00000564172 MUTYHQ9UIF7 546 aa17.09■□□□□ 0.33
GDE1-203ENST00000564172 KCNK6Q9Y257 313 aa17.09■□□□□ 0.33
GDE1-203ENST00000564172 PRR19A6NJB7 356 aa17.08■□□□□ 0.33
GDE1-203ENST00000564172 PRAMEF26H0Y7S4 382 aa17.08■□□□□ 0.33
GDE1-203ENST00000564172 IFRD1O00458 451 aaPredicted RBP17.08■□□□□ 0.33
GDE1-203ENST00000564172 ENO1P06733 434 aaKnown RBP17.08■□□□□ 0.33
GDE1-203ENST00000564172 HGFP14210 728 aa17.08■□□□□ 0.33
GDE1-203ENST00000564172 CXCR2P25025 360 aa17.08■□□□□ 0.33
GDE1-203ENST00000564172 CLCNKAP51800 687 aa17.08■□□□□ 0.33
GDE1-203ENST00000564172 ZBED5Q49AG3 693 aa17.08■□□□□ 0.33
GDE1-203ENST00000564172 SNX31Q8N9S9 440 aa17.08■□□□□ 0.33
GDE1-203ENST00000564172 ZNF480Q8WV37 535 aa17.08■□□□□ 0.33
GDE1-203ENST00000564172 OR1E3Q8WZA6 343 aa17.08■□□□□ 0.33
GDE1-203ENST00000564172 ISOC1Q96CN7 298 aa17.08■□□□□ 0.33
GDE1-203ENST00000564172 DOK1Q99704 481 aa17.08■□□□□ 0.33
GDE1-203ENST00000564172 OSGEPL1Q9H4B0 414 aa17.08■□□□□ 0.33
GDE1-203ENST00000564172 AKTIPQ9H8T0 292 aa17.08■□□□□ 0.33
GDE1-203ENST00000564172 RNF11Q9Y3C5 154 aa17.08■□□□□ 0.33
GDE1-203ENST00000564172 ZSCAN5BA6NJL1 495 aa17.08■□□□□ 0.32
GDE1-203ENST00000564172 PSMD12O00232 456 aaPredicted RBP17.08■□□□□ 0.32
GDE1-203ENST00000564172 BMXP51813 675 aa17.08■□□□□ 0.32
GDE1-203ENST00000564172 MTAPQ13126 283 aa17.08■□□□□ 0.32
GDE1-203ENST00000564172 TJAP1Q5JTD0 557 aa17.08■□□□□ 0.32
GDE1-203ENST00000564172 SCIMPQ6UWF3 145 aa17.08■□□□□ 0.32
GDE1-203ENST00000564172 CHSY3Q70JA7 882 aa17.08■□□□□ 0.32
GDE1-203ENST00000564172 ABI3BPQ7Z7G0 1075 aa17.08■□□□□ 0.32
GDE1-203ENST00000564172 CHCHD4Q8N4Q1 142 aa17.08■□□□□ 0.32
GDE1-203ENST00000564172 OR5AR1Q8NGP9 310 aa17.08■□□□□ 0.32
GDE1-203ENST00000564172 OR56A3Q8NH54 315 aa17.08■□□□□ 0.32
GDE1-203ENST00000564172 PDXPQ96GD0 296 aa17.08■□□□□ 0.32
GDE1-203ENST00000564172 ZNF385DQ9H6B1 395 aa17.08■□□□□ 0.32
GDE1-203ENST00000564172 RIC8BQ9NVN3 520 aa17.08■□□□□ 0.32
GDE1-203ENST00000564172 CFAP20Q9Y6A4 193 aaKnown RBP17.08■□□□□ 0.32
GDE1-203ENST00000564172 SCAMP1O15126 338 aa17.07■□□□□ 0.32
GDE1-203ENST00000564172 CLDN9O95484 217 aa17.07■□□□□ 0.32
GDE1-203ENST00000564172 SLC35G4P0C7Q5 338 aa17.07■□□□□ 0.32
GDE1-203ENST00000564172 TTKP33981 857 aa17.07■□□□□ 0.32
GDE1-203ENST00000564172 RPS9P46781 194 aaKnown RBP17.07■□□□□ 0.32
GDE1-203ENST00000564172 ESRRGP62508 458 aa17.07■□□□□ 0.32
GDE1-203ENST00000564172 Q6ZSR6 202 aa17.07■□□□□ 0.32
GDE1-203ENST00000564172 AMIGO2Q86SJ2 522 aa17.07■□□□□ 0.32
GDE1-203ENST00000564172 THOC6Q86W42 341 aaKnown RBP17.07■□□□□ 0.32
GDE1-203ENST00000564172 KLHDC8AQ8IYD2 350 aa17.07■□□□□ 0.32
GDE1-203ENST00000564172 ADCY4Q8NFM4 1077 aa17.07■□□□□ 0.32
GDE1-203ENST00000564172 SLC26A7Q8TE54 656 aa17.07■□□□□ 0.32
GDE1-203ENST00000564172 RAD51AP1Q96B01 352 aa17.07■□□□□ 0.32
GDE1-203ENST00000564172 ZNF486Q96H40 463 aaPredicted RBP17.07■□□□□ 0.32
GDE1-203ENST00000564172 UQCC2Q9BRT2 126 aa17.07■□□□□ 0.32
GDE1-203ENST00000564172 HOXD1Q9GZZ0 328 aa17.07■□□□□ 0.32
GDE1-203ENST00000564172 ACTR8Q9H981 624 aa17.07■□□□□ 0.32
GDE1-203ENST00000564172 TRPS1Q9UHF7 1281 aa17.07■□□□□ 0.32
GDE1-203ENST00000564172 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.07■□□□□ 0.32
GDE1-203ENST00000564172 MYO1DO94832 1006 aa17.06■□□□□ 0.32
GDE1-203ENST00000564172 PRKCAP17252 672 aa17.06■□□□□ 0.32
GDE1-203ENST00000564172 CLK3P49761 638 aaKnown RBP17.06■□□□□ 0.32
GDE1-203ENST00000564172 HTR6P50406 440 aa17.06■□□□□ 0.32
GDE1-203ENST00000564172 PPP2R2BQ00005 443 aa17.06■□□□□ 0.32
GDE1-203ENST00000564172 KLF10Q13118 480 aa17.06■□□□□ 0.32
GDE1-203ENST00000564172 CCNIQ14094 377 aa17.06■□□□□ 0.32
GDE1-203ENST00000564172 GRB7Q14451 532 aa17.06■□□□□ 0.32
GDE1-203ENST00000564172 XKR7Q5GH72 579 aa17.06■□□□□ 0.32
GDE1-203ENST00000564172 DCUN1D3Q8IWE4 304 aa17.06■□□□□ 0.32
GDE1-203ENST00000564172 LINC00469Q8N7U9 141 aa17.06■□□□□ 0.32
GDE1-203ENST00000564172 TTC9Q92623 222 aa17.06■□□□□ 0.32
GDE1-203ENST00000564172 TSACCQ96A04 125 aaPredicted RBP17.06■□□□□ 0.32
GDE1-203ENST00000564172 C12orf43Q96C57 262 aaKnown RBP17.06■□□□□ 0.32
GDE1-203ENST00000564172 TUBGCP3Q96CW5 907 aa17.06■□□□□ 0.32
GDE1-203ENST00000564172 MED8Q96G25 268 aa17.06■□□□□ 0.32
GDE1-203ENST00000564172 MARK4Q96L34 752 aa17.06■□□□□ 0.32
GDE1-203ENST00000564172 CNBD2Q96M20 576 aa17.06■□□□□ 0.32
GDE1-203ENST00000564172 OR2M4Q96R27 311 aa17.06■□□□□ 0.32
GDE1-203ENST00000564172 POLG2Q9UHN1 485 aa17.06■□□□□ 0.32
GDE1-203ENST00000564172 SIT1Q9Y3P8 196 aa17.06■□□□□ 0.32
GDE1-203ENST00000564172 VCANP13611 3396 aa17.06■□□□□ 0.32
GDE1-203ENST00000564172 TNFRSF10CO14798 259 aa17.06■□□□□ 0.32
GDE1-203ENST00000564172 UBDO15205 165 aa17.06■□□□□ 0.32
GDE1-203ENST00000564172 PRAMEF4O60810 478 aa17.06■□□□□ 0.32
GDE1-203ENST00000564172 DCNP07585 359 aaKnown RBP17.06■□□□□ 0.32
GDE1-203ENST00000564172 PRAMEF9Q5VWM5 478 aa17.06■□□□□ 0.32
GDE1-203ENST00000564172 TICAM1Q8IUC6 712 aa17.06■□□□□ 0.32
GDE1-203ENST00000564172 SYTL1Q8IYJ3 562 aa17.06■□□□□ 0.32
GDE1-203ENST00000564172 GJD3Q8N144 294 aa17.06■□□□□ 0.32
GDE1-203ENST00000564172 CAMKK1Q8N5S9 505 aa17.06■□□□□ 0.32
GDE1-203ENST00000564172 OR13H1Q8NG92 308 aa17.06■□□□□ 0.32
GDE1-203ENST00000564172 OR5K2Q8NHB8 316 aa17.06■□□□□ 0.32
GDE1-203ENST00000564172 TMIGD2Q96BF3 282 aa17.06■□□□□ 0.32
GDE1-203ENST00000564172 CLPTM1LQ96KA5 538 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms