RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 STPG4Q8N801 248 aa2.95□□□□□ -1.94
SHCBP1-202ENST00000563219 PSMA8Q8TAA3 256 aa2.95□□□□□ -1.94
SHCBP1-202ENST00000563219 BCL2L2Q92843 193 aaPredicted RBP2.95□□□□□ -1.94
SHCBP1-202ENST00000563219 WBP2Q969T9 261 aa2.95□□□□□ -1.94
SHCBP1-202ENST00000563219 TSACCQ96A04 125 aaPredicted RBP2.95□□□□□ -1.94
SHCBP1-202ENST00000563219 RFT1Q96AA3 541 aa2.95□□□□□ -1.94
SHCBP1-202ENST00000563219 CENPTQ96BT3 561 aa2.95□□□□□ -1.94
SHCBP1-202ENST00000563219 C5orf30Q96GV9 206 aa2.95□□□□□ -1.94
SHCBP1-202ENST00000563219 CDKN2AIPNLQ96HQ2 116 aa2.95□□□□□ -1.94
SHCBP1-202ENST00000563219 NSL1Q96IY1 281 aa2.95□□□□□ -1.94
SHCBP1-202ENST00000563219 ZNF560Q96MR9 790 aa2.95□□□□□ -1.94
SHCBP1-202ENST00000563219 GAL3ST4Q96RP7 486 aa2.95□□□□□ -1.94
SHCBP1-202ENST00000563219 CDK19Q9BWU1 502 aa2.95□□□□□ -1.94
SHCBP1-202ENST00000563219 KRT23Q9C075 422 aa2.95□□□□□ -1.94
SHCBP1-202ENST00000563219 MIS12Q9H081 205 aa2.95□□□□□ -1.94
SHCBP1-202ENST00000563219 PKD2L2Q9NZM6 624 aa2.95□□□□□ -1.94
SHCBP1-202ENST00000563219 NDUFA13Q9P0J0 144 aa2.95□□□□□ -1.94
SHCBP1-202ENST00000563219 NOCTQ9UK39 431 aaKnown RBP2.95□□□□□ -1.94
SHCBP1-202ENST00000563219 TNNQ9UQP3 1299 aa2.95□□□□□ -1.94
SHCBP1-202ENST00000563219 KCNK6Q9Y257 313 aa2.95□□□□□ -1.94
SHCBP1-202ENST00000563219 TEX264Q9Y6I9 313 aa2.95□□□□□ -1.94
SHCBP1-202ENST00000563219 TRAV24A0A0B4J272 114 aa2.94□□□□□ -1.94
SHCBP1-202ENST00000563219 SDR42E2A6NKP2 422 aa2.94□□□□□ -1.94
SHCBP1-202ENST00000563219 PMS2P5A8MQ11 134 aa2.94□□□□□ -1.94
SHCBP1-202ENST00000563219 F8VVB4 439 aa2.94□□□□□ -1.94
SHCBP1-202ENST00000563219 F8VWA3 439 aa2.94□□□□□ -1.94
SHCBP1-202ENST00000563219 ARPC2O15144 300 aa2.94□□□□□ -1.94
SHCBP1-202ENST00000563219 PIGNO95427 931 aa2.94□□□□□ -1.94
SHCBP1-202ENST00000563219 ERVK-10P10266 1014 aa2.94□□□□□ -1.94
SHCBP1-202ENST00000563219 UGT1A6P19224 532 aa2.94□□□□□ -1.94
SHCBP1-202ENST00000563219 CYP2A7P20853 494 aa2.94□□□□□ -1.94
SHCBP1-202ENST00000563219 LHCGRP22888 699 aa2.94□□□□□ -1.94
SHCBP1-202ENST00000563219 MAPK3P27361 379 aaPredicted RBP2.94□□□□□ -1.94
SHCBP1-202ENST00000563219 CD86P42081 329 aa2.94□□□□□ -1.94
SHCBP1-202ENST00000563219 OR3A1P47881 315 aa2.94□□□□□ -1.94
SHCBP1-202ENST00000563219 KHKP50053 298 aa2.94□□□□□ -1.94
SHCBP1-202ENST00000563219 LUMP51884 338 aaPredicted RBP2.94□□□□□ -1.94
SHCBP1-202ENST00000563219 KRTAP10-5P60370 271 aa2.94□□□□□ -1.94
SHCBP1-202ENST00000563219 ARF5P84085 180 aa2.94□□□□□ -1.94
SHCBP1-202ENST00000563219 ABRQ12979 859 aa2.94□□□□□ -1.94
SHCBP1-202ENST00000563219 RBBP7Q16576 425 aa2.94□□□□□ -1.94
SHCBP1-202ENST00000563219 PHKG1Q16816 387 aa2.94□□□□□ -1.94
SHCBP1-202ENST00000563219 FAM174BQ3ZCQ3 159 aa2.94□□□□□ -1.94
SHCBP1-202ENST00000563219 ZNF542PQ5EBM4 170 aa2.94□□□□□ -1.94
SHCBP1-202ENST00000563219 XKR3Q5GH77 459 aa2.94□□□□□ -1.94
SHCBP1-202ENST00000563219 CYP4A22Q5TCH4 519 aa2.94□□□□□ -1.94
SHCBP1-202ENST00000563219 LRRC38Q5VT99 294 aa2.94□□□□□ -1.94
SHCBP1-202ENST00000563219 PM20D1Q6GTS8 502 aa2.94□□□□□ -1.94
SHCBP1-202ENST00000563219 FBXL22Q6P050 247 aa2.94□□□□□ -1.94
SHCBP1-202ENST00000563219 TTC27Q6P3X3 843 aa2.94□□□□□ -1.94
SHCBP1-202ENST00000563219 NOTUMQ6P988 496 aa2.94□□□□□ -1.94
SHCBP1-202ENST00000563219 RBMS3Q6XE24 437 aaKnown RBP2.94□□□□□ -1.94
SHCBP1-202ENST00000563219 CATSPER4Q7RTX7 472 aa2.94□□□□□ -1.94
SHCBP1-202ENST00000563219 MEX3DQ86XN8 651 aaKnown RBP2.94□□□□□ -1.94
SHCBP1-202ENST00000563219 HSCBQ8IWL3 235 aa2.94□□□□□ -1.94
SHCBP1-202ENST00000563219 LRTM2Q8N967 370 aa2.94□□□□□ -1.94
SHCBP1-202ENST00000563219 ZNF383Q8NA42 475 aa2.94□□□□□ -1.94
SHCBP1-202ENST00000563219 TRIM58Q8NG06 486 aa2.94□□□□□ -1.94
SHCBP1-202ENST00000563219 URGCPQ8TCY9 931 aa2.94□□□□□ -1.94
SHCBP1-202ENST00000563219 PGM2Q96G03 612 aa2.94□□□□□ -1.94
SHCBP1-202ENST00000563219 WBP1Q96G27 269 aa2.94□□□□□ -1.94
SHCBP1-202ENST00000563219 RUFY1Q96T51 708 aa2.94□□□□□ -1.94
SHCBP1-202ENST00000563219 NDNQ99608 321 aa2.94□□□□□ -1.94
SHCBP1-202ENST00000563219 ATG101Q9BSB4 218 aa2.94□□□□□ -1.94
SHCBP1-202ENST00000563219 RHNO1Q9BSD3 238 aa2.94□□□□□ -1.94
SHCBP1-202ENST00000563219 PI4K2AQ9BTU6 479 aa2.94□□□□□ -1.94
SHCBP1-202ENST00000563219 ACPTQ9BZG2 426 aa2.94□□□□□ -1.94
SHCBP1-202ENST00000563219 XPO4Q9C0E2 1151 aaKnown RBP2.94□□□□□ -1.94
SHCBP1-202ENST00000563219 LAT2Q9GZY6 243 aa2.94□□□□□ -1.94
SHCBP1-202ENST00000563219 ZMYND12Q9H0C1 365 aa2.94□□□□□ -1.94
SHCBP1-202ENST00000563219 BICC1Q9H694 974 aaKnown RBP2.94□□□□□ -1.94
SHCBP1-202ENST00000563219 TLE6Q9H808 572 aa2.94□□□□□ -1.94
SHCBP1-202ENST00000563219 RNF121Q9H920 327 aa2.94□□□□□ -1.94
SHCBP1-202ENST00000563219 FAM207AQ9NSI2 230 aaPredicted RBP2.94□□□□□ -1.94
SHCBP1-202ENST00000563219 ANO10Q9NW15 660 aa2.94□□□□□ -1.94
SHCBP1-202ENST00000563219 SPHK1Q9NYA1 384 aa2.94□□□□□ -1.94
SHCBP1-202ENST00000563219 SLCO1C1Q9NYB5 712 aa2.94□□□□□ -1.94
SHCBP1-202ENST00000563219 ZDHHC2Q9UIJ5 367 aa2.94□□□□□ -1.94
SHCBP1-202ENST00000563219 APPL1Q9UKG1 709 aa2.94□□□□□ -1.94
SHCBP1-202ENST00000563219 STUB1Q9UNE7 303 aa2.94□□□□□ -1.94
SHCBP1-202ENST00000563219 NCKAP1Q9Y2A7 1128 aa2.94□□□□□ -1.94
SHCBP1-202ENST00000563219 TDRKHQ9Y2W6 561 aaKnown RBP2.94□□□□□ -1.94
SHCBP1-202ENST00000563219 STRAPQ9Y3F4 350 aaKnown RBP2.94□□□□□ -1.94
SHCBP1-202ENST00000563219 R4GN57 208 aa2.94□□□□□ -1.94
SHCBP1-202ENST00000563219 LOC101059948A0A1B0GTJ6 334 aa2.93□□□□□ -1.94
SHCBP1-202ENST00000563219 CCDC69A6NI79 296 aa2.93□□□□□ -1.94
SHCBP1-202ENST00000563219 SMIM1B2RUZ4 78 aa2.93□□□□□ -1.94
SHCBP1-202ENST00000563219 C17orf105B2RV13 164 aa2.93□□□□□ -1.94
SHCBP1-202ENST00000563219 BLOC1S5-TXNDC5H3BN57 136 aa2.93□□□□□ -1.94
SHCBP1-202ENST00000563219 CACNB4O00305 520 aaPredicted RBP2.93□□□□□ -1.94
SHCBP1-202ENST00000563219 PCDH7O60245 1069 aa2.93□□□□□ -1.94
SHCBP1-202ENST00000563219 CIDEAO60543 219 aa2.93□□□□□ -1.94
SHCBP1-202ENST00000563219 SEC22BO75396 215 aa2.93□□□□□ -1.94
SHCBP1-202ENST00000563219 PRKRAO75569 313 aaKnown RBP2.93□□□□□ -1.94
SHCBP1-202ENST00000563219 CAVIN2O95810 425 aa2.93□□□□□ -1.94
SHCBP1-202ENST00000563219 BAG3O95817 575 aa2.93□□□□□ -1.94
SHCBP1-202ENST00000563219 MOCS2O96007 188 aaPredicted RBP2.93□□□□□ -1.94
SHCBP1-202ENST00000563219 CGAP01215 116 aa2.93□□□□□ -1.94
SHCBP1-202ENST00000563219 ABHD2P08910 425 aa2.93□□□□□ -1.94
SHCBP1-202ENST00000563219 FRMD6-AS1P0C7T7 363 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms