RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 TRIM62Q9BVG3 475 aa13.59□□□□□ -0.23
GTF3C1-203ENST00000562609 SRRQ9GZT4 340 aa13.59□□□□□ -0.23
GTF3C1-203ENST00000562609 TLR6Q9Y2C9 796 aa13.59□□□□□ -0.23
GTF3C1-203ENST00000562609 ACTL7AQ9Y615 435 aa13.59□□□□□ -0.23
GTF3C1-203ENST00000562609 PI15O43692 258 aa13.59□□□□□ -0.23
GTF3C1-203ENST00000562609 VPS4BO75351 444 aa13.59□□□□□ -0.23
GTF3C1-203ENST00000562609 WDR47O94967 919 aa13.59□□□□□ -0.23
GTF3C1-203ENST00000562609 NRIP1P48552 1158 aa13.59□□□□□ -0.23
GTF3C1-203ENST00000562609 KCNQ1P51787 676 aa13.59□□□□□ -0.23
GTF3C1-203ENST00000562609 DGKQP52824 942 aa13.59□□□□□ -0.23
GTF3C1-203ENST00000562609 ZNF33BQ06732 778 aa13.59□□□□□ -0.23
GTF3C1-203ENST00000562609 PRKG2Q13237 762 aa13.59□□□□□ -0.23
GTF3C1-203ENST00000562609 BTN1A1Q13410 526 aa13.59□□□□□ -0.23
GTF3C1-203ENST00000562609 IHHQ14623 411 aa13.59□□□□□ -0.23
GTF3C1-203ENST00000562609 FBXO48Q5FWF7 155 aa13.59□□□□□ -0.23
GTF3C1-203ENST00000562609 SHQ1Q6PI26 577 aaKnown RBP13.59□□□□□ -0.23
GTF3C1-203ENST00000562609 TMEM207Q6UWW9 146 aa13.59□□□□□ -0.23
GTF3C1-203ENST00000562609 TTC16Q8NEE8 873 aa13.59□□□□□ -0.23
GTF3C1-203ENST00000562609 ENKURQ8TC29 256 aa13.59□□□□□ -0.23
GTF3C1-203ENST00000562609 PXYLP1Q8TE99 480 aa13.59□□□□□ -0.23
GTF3C1-203ENST00000562609 APH1BQ8WW43 257 aa13.59□□□□□ -0.23
GTF3C1-203ENST00000562609 CCDC115Q96NT0 180 aa13.59□□□□□ -0.23
GTF3C1-203ENST00000562609 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.59□□□□□ -0.23
GTF3C1-203ENST00000562609 PPIL3Q9H2H8 161 aaKnown RBP13.59□□□□□ -0.23
GTF3C1-203ENST00000562609 PPA2Q9H2U2 334 aa13.59□□□□□ -0.23
GTF3C1-203ENST00000562609 FBXO44Q9H4M3 255 aa13.59□□□□□ -0.23
GTF3C1-203ENST00000562609 MARCH2Q9P0N8 246 aa13.59□□□□□ -0.23
GTF3C1-203ENST00000562609 ALG5Q9Y673 324 aa13.59□□□□□ -0.23
GTF3C1-203ENST00000562609 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.58□□□□□ -0.24
GTF3C1-203ENST00000562609 MYO1GB0I1T2 1018 aa13.58□□□□□ -0.24
GTF3C1-203ENST00000562609 CXCR6O00574 342 aa13.58□□□□□ -0.24
GTF3C1-203ENST00000562609 FGF10O15520 208 aaPredicted RBP13.58□□□□□ -0.24
GTF3C1-203ENST00000562609 CD72P21854 359 aa13.58□□□□□ -0.24
GTF3C1-203ENST00000562609 SLC19A1P41440 591 aa13.58□□□□□ -0.24
GTF3C1-203ENST00000562609 LIMK1P53667 647 aa13.58□□□□□ -0.24
GTF3C1-203ENST00000562609 GRIK2Q13002 908 aa13.58□□□□□ -0.24
GTF3C1-203ENST00000562609 MYLKQ15746 1914 aa13.58□□□□□ -0.24
GTF3C1-203ENST00000562609 SLC35F1Q5T1Q4 408 aa13.58□□□□□ -0.24
GTF3C1-203ENST00000562609 TMEM81Q6P7N7 255 aa13.58□□□□□ -0.24
GTF3C1-203ENST00000562609 ZFAND4Q86XD8 727 aa13.58□□□□□ -0.24
GTF3C1-203ENST00000562609 DPP10Q8N608 796 aa13.58□□□□□ -0.24
GTF3C1-203ENST00000562609 ZNF548Q8NEK5 533 aaPredicted RBP13.58□□□□□ -0.24
GTF3C1-203ENST00000562609 FUBP3Q96I24 572 aaKnown RBP eCLIP13.58□□□□□ -0.24
GTF3C1-203ENST00000562609 RPRD1AQ96P16 312 aaPredicted RBP13.58□□□□□ -0.24
GTF3C1-203ENST00000562609 DEFB118Q96PH6 123 aa13.58□□□□□ -0.24
GTF3C1-203ENST00000562609 TSEN34Q9BSV6 310 aaKnown RBP13.58□□□□□ -0.24
GTF3C1-203ENST00000562609 C5orf42Q9H799 3197 aa13.58□□□□□ -0.24
GTF3C1-203ENST00000562609 C3orf14Q9HBI5 128 aa13.58□□□□□ -0.24
GTF3C1-203ENST00000562609 FARSBQ9NSD9 589 aaKnown RBP13.58□□□□□ -0.24
GTF3C1-203ENST00000562609 PATJQ8NI35 1801 aa13.58□□□□□ -0.24
GTF3C1-203ENST00000562609 A0A075B6Q4 140 aa13.58□□□□□ -0.24
GTF3C1-203ENST00000562609 TMEM189-UBE2V1I3L0A0 370 aa13.58□□□□□ -0.24
GTF3C1-203ENST00000562609 CPN2P22792 545 aa13.58□□□□□ -0.24
GTF3C1-203ENST00000562609 PER3P56645 1201 aa13.58□□□□□ -0.24
GTF3C1-203ENST00000562609 AANATQ16613 207 aa13.58□□□□□ -0.24
GTF3C1-203ENST00000562609 CARD16Q5EG05 197 aa13.58□□□□□ -0.24
GTF3C1-203ENST00000562609 KIAA1614Q5VZ46 1190 aa13.58□□□□□ -0.24
GTF3C1-203ENST00000562609 TEX261Q6UWH6 196 aa13.58□□□□□ -0.24
GTF3C1-203ENST00000562609 LURAP1LQ8IV03 231 aa13.58□□□□□ -0.24
GTF3C1-203ENST00000562609 ZNF680Q8NEM1 530 aa13.58□□□□□ -0.24
GTF3C1-203ENST00000562609 PPHLN1Q8NEY8 458 aaKnown RBP13.58□□□□□ -0.24
GTF3C1-203ENST00000562609 VANGL1Q8TAA9 524 aaPredicted RBP13.58□□□□□ -0.24
GTF3C1-203ENST00000562609 MRGPRX2Q96LB1 330 aa13.58□□□□□ -0.24
GTF3C1-203ENST00000562609 TSGA13Q96PP4 275 aa13.58□□□□□ -0.24
GTF3C1-203ENST00000562609 BRINP2Q9C0B6 783 aa13.58□□□□□ -0.24
GTF3C1-203ENST00000562609 SEMA4BQ9NPR2 832 aaPredicted RBP13.58□□□□□ -0.24
GTF3C1-203ENST00000562609 VAPAQ9P0L0 249 aa13.58□□□□□ -0.24
GTF3C1-203ENST00000562609 AAR2Q9Y312 384 aaKnown RBP13.58□□□□□ -0.24
GTF3C1-203ENST00000562609 U3KQ87 197 aa13.58□□□□□ -0.24
GTF3C1-203ENST00000562609 SYN3O14994 580 aa13.57□□□□□ -0.24
GTF3C1-203ENST00000562609 PTHP01270 115 aa13.57□□□□□ -0.24
GTF3C1-203ENST00000562609 GALTP07902 379 aa13.57□□□□□ -0.24
GTF3C1-203ENST00000562609 HOXA9P31269 272 aa13.57□□□□□ -0.24
GTF3C1-203ENST00000562609 HOXC13P31276 330 aa13.57□□□□□ -0.24
GTF3C1-203ENST00000562609 HMGCLP35914 325 aa13.57□□□□□ -0.24
GTF3C1-203ENST00000562609 CD86P42081 329 aa13.57□□□□□ -0.24
GTF3C1-203ENST00000562609 DSC2Q02487 901 aa13.57□□□□□ -0.24
GTF3C1-203ENST00000562609 RIN1Q13671 783 aa13.57□□□□□ -0.24
GTF3C1-203ENST00000562609 IGSF11Q5DX21 431 aa13.57□□□□□ -0.24
GTF3C1-203ENST00000562609 HECTD2Q5U5R9 776 aa13.57□□□□□ -0.24
GTF3C1-203ENST00000562609 KDM4DQ6B0I6 523 aa13.57□□□□□ -0.24
GTF3C1-203ENST00000562609 RAB44Q7Z6P3 723 aaPredicted RBP13.57□□□□□ -0.24
GTF3C1-203ENST00000562609 PIM3Q86V86 326 aa13.57□□□□□ -0.24
GTF3C1-203ENST00000562609 PGBD5Q8N414 524 aa13.57□□□□□ -0.24
GTF3C1-203ENST00000562609 C9orf62Q8N4C0 152 aa13.57□□□□□ -0.24
GTF3C1-203ENST00000562609 RIT1Q92963 219 aa13.57□□□□□ -0.24
GTF3C1-203ENST00000562609 FCRL5Q96RD9 977 aa13.57□□□□□ -0.24
GTF3C1-203ENST00000562609 MCUBQ9NWR8 336 aa13.57□□□□□ -0.24
GTF3C1-203ENST00000562609 ELF5Q9UKW6 265 aaPredicted RBP13.57□□□□□ -0.24
GTF3C1-203ENST00000562609 DOCK4Q8N1I0 1966 aa13.57□□□□□ -0.24
GTF3C1-203ENST00000562609 OR5K4A6NMS3 321 aa13.57□□□□□ -0.24
GTF3C1-203ENST00000562609 PPM1BO75688 479 aa13.57□□□□□ -0.24
GTF3C1-203ENST00000562609 PRR35P0CG20 571 aa13.57□□□□□ -0.24
GTF3C1-203ENST00000562609 MADCAM1Q13477 382 aa13.57□□□□□ -0.24
GTF3C1-203ENST00000562609 MRPL58Q14197 206 aaKnown RBP13.57□□□□□ -0.24
GTF3C1-203ENST00000562609 PLET1Q6UQ28 207 aa13.57□□□□□ -0.24
GTF3C1-203ENST00000562609 GLCCI1Q86VQ1 547 aa13.57□□□□□ -0.24
GTF3C1-203ENST00000562609 ENTHD1Q8IYW4 607 aa13.57□□□□□ -0.24
GTF3C1-203ENST00000562609 SH3RF2Q8TEC5 729 aa13.57□□□□□ -0.24
GTF3C1-203ENST00000562609 TSPAN17Q96FV3 270 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms