RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 PRICKLE3O43900 615 aaPredicted RBP6.29□□□□□ -1.4
CAPN3-210ENST00000561817 TECTAO75443 2155 aa6.29□□□□□ -1.4
CAPN3-210ENST00000561817 ETHE1O95571 254 aa6.29□□□□□ -1.4
CAPN3-210ENST00000561817 APBB3O95704 486 aa6.29□□□□□ -1.4
CAPN3-210ENST00000561817 EML2O95834 649 aa6.29□□□□□ -1.4
CAPN3-210ENST00000561817 TBX6O95947 436 aaPredicted RBP6.29□□□□□ -1.4
CAPN3-210ENST00000561817 FAM157BP0CG42 384 aa6.29□□□□□ -1.4
CAPN3-210ENST00000561817 C1GALT1C1LP0DN25 315 aa6.29□□□□□ -1.4
CAPN3-210ENST00000561817 ACP5P13686 325 aa6.29□□□□□ -1.4
CAPN3-210ENST00000561817 HSD3B1P14060 373 aa6.29□□□□□ -1.4
CAPN3-210ENST00000561817 SLC2A4P14672 509 aa6.29□□□□□ -1.4
CAPN3-210ENST00000561817 HOXB9P17482 250 aaPredicted RBP6.29□□□□□ -1.4
CAPN3-210ENST00000561817 AMD1P17707 334 aa6.29□□□□□ -1.4
CAPN3-210ENST00000561817 HNRNPA2B1P22626 353 aaKnown RBP6.29□□□□□ -1.4
CAPN3-210ENST00000561817 TACR1P25103 407 aa6.29□□□□□ -1.4
CAPN3-210ENST00000561817 PEX19P40855 299 aa6.29□□□□□ -1.4
CAPN3-210ENST00000561817 DGKEP52429 567 aa6.29□□□□□ -1.4
CAPN3-210ENST00000561817 POLR2JP52435 117 aaKnown RBP6.29□□□□□ -1.4
CAPN3-210ENST00000561817 CLDN8P56748 225 aa6.29□□□□□ -1.4
CAPN3-210ENST00000561817 C21orf58P58505 322 aa6.29□□□□□ -1.4
CAPN3-210ENST00000561817 STARD6P59095 220 aa6.29□□□□□ -1.4
CAPN3-210ENST00000561817 RPL38P63173 70 aaKnown RBP6.29□□□□□ -1.4
CAPN3-210ENST00000561817 PHC1P78364 1004 aa6.29□□□□□ -1.4
CAPN3-210ENST00000561817 RAE1P78406 368 aaKnown RBP6.29□□□□□ -1.4
CAPN3-210ENST00000561817 PRKCQQ04759 706 aa6.29□□□□□ -1.4
CAPN3-210ENST00000561817 FOXM1Q08050 763 aa6.29□□□□□ -1.4
CAPN3-210ENST00000561817 SIGLEC14Q08ET2 396 aa6.29□□□□□ -1.4
CAPN3-210ENST00000561817 SFSWAPQ12872 951 aaKnown RBP6.29□□□□□ -1.4
CAPN3-210ENST00000561817 CSTF3Q12996 717 aaKnown RBP6.29□□□□□ -1.4
CAPN3-210ENST00000561817 ART3Q13508 389 aa6.29□□□□□ -1.4
CAPN3-210ENST00000561817 PTGR1Q14914 329 aa6.29□□□□□ -1.4
CAPN3-210ENST00000561817 CLCA4Q14CN2 919 aa6.29□□□□□ -1.4
CAPN3-210ENST00000561817 FXNQ16595 210 aa6.29□□□□□ -1.4
CAPN3-210ENST00000561817 SGO1Q5FBB7 561 aa6.29□□□□□ -1.4
CAPN3-210ENST00000561817 XKR6Q5GH73 641 aa6.29□□□□□ -1.4
CAPN3-210ENST00000561817 CATSPEREQ5SY80 951 aa6.29□□□□□ -1.4
CAPN3-210ENST00000561817 CAPN13Q6MZZ7 669 aaPredicted RBP6.29□□□□□ -1.4
CAPN3-210ENST00000561817 DUS1LQ6P1R4 473 aaKnown RBP6.29□□□□□ -1.4
CAPN3-210ENST00000561817 NXPE4Q6UWF7 544 aa6.29□□□□□ -1.4
CAPN3-210ENST00000561817 LCTLQ6UWM7 567 aa6.29□□□□□ -1.4
CAPN3-210ENST00000561817 DLEU7Q6UYE1 221 aa6.29□□□□□ -1.4
CAPN3-210ENST00000561817 WASH2PQ6VEQ5 465 aa6.29□□□□□ -1.4
CAPN3-210ENST00000561817 ZNF852Q6ZMS4 543 aa6.29□□□□□ -1.4
CAPN3-210ENST00000561817 VN1R5Q7Z5H4 357 aa6.29□□□□□ -1.4
CAPN3-210ENST00000561817 ABI3BPQ7Z7G0 1075 aa6.29□□□□□ -1.4
CAPN3-210ENST00000561817 NRROSQ86YC3 692 aa6.29□□□□□ -1.4
CAPN3-210ENST00000561817 SLC15A3Q8IY34 581 aa6.29□□□□□ -1.4
CAPN3-210ENST00000561817 TBC1D21Q8IYX1 336 aa6.29□□□□□ -1.4
CAPN3-210ENST00000561817 MINDY1Q8N5J2 469 aa6.29□□□□□ -1.4
CAPN3-210ENST00000561817 LINC01555Q8NAE3 123 aa6.29□□□□□ -1.4
CAPN3-210ENST00000561817 OR7G3Q8NG95 312 aa6.29□□□□□ -1.4
CAPN3-210ENST00000561817 OR4K1Q8NGD4 311 aa6.29□□□□□ -1.4
CAPN3-210ENST00000561817 SELENOMQ8WWX9 145 aa6.29□□□□□ -1.4
CAPN3-210ENST00000561817 EDAQ92838 391 aa6.29□□□□□ -1.4
CAPN3-210ENST00000561817 VPS33AQ96AX1 596 aa6.29□□□□□ -1.4
CAPN3-210ENST00000561817 RAD51AP1Q96B01 352 aa6.29□□□□□ -1.4
CAPN3-210ENST00000561817 MTFMTQ96DP5 389 aaKnown RBP6.29□□□□□ -1.4
CAPN3-210ENST00000561817 MED8Q96G25 268 aa6.29□□□□□ -1.4
CAPN3-210ENST00000561817 PDXPQ96GD0 296 aa6.29□□□□□ -1.4
CAPN3-210ENST00000561817 APIPQ96GX9 242 aa6.29□□□□□ -1.4
CAPN3-210ENST00000561817 METTL2AQ96IZ6 378 aaKnown RBP6.29□□□□□ -1.4
CAPN3-210ENST00000561817 ELOVL6Q9H5J4 265 aa6.29□□□□□ -1.4
CAPN3-210ENST00000561817 CXorf56Q9H5V9 222 aa6.29□□□□□ -1.4
CAPN3-210ENST00000561817 CLMPQ9H6B4 373 aa6.29□□□□□ -1.4
CAPN3-210ENST00000561817 C6orf106Q9H6K1 298 aaPredicted RBP6.29□□□□□ -1.4
CAPN3-210ENST00000561817 DCLRE1BQ9H816 532 aa6.29□□□□□ -1.4
CAPN3-210ENST00000561817 LMAN1LQ9HAT1 526 aa6.29□□□□□ -1.4
CAPN3-210ENST00000561817 BRF2Q9HAW0 419 aa6.29□□□□□ -1.4
CAPN3-210ENST00000561817 WASH6PQ9NQA3 447 aa6.29□□□□□ -1.4
CAPN3-210ENST00000561817 AASDHPPTQ9NRN7 309 aa6.29□□□□□ -1.4
CAPN3-210ENST00000561817 CMTM6Q9NX76 183 aa6.29□□□□□ -1.4
CAPN3-210ENST00000561817 SIRT5Q9NXA8 310 aa6.29□□□□□ -1.4
CAPN3-210ENST00000561817 WSB2Q9NYS7 404 aaPredicted RBP6.29□□□□□ -1.4
CAPN3-210ENST00000561817 SCHIP1Q9P0W5 487 aaPredicted RBP6.29□□□□□ -1.4
CAPN3-210ENST00000561817 SPATA7Q9P0W8 599 aa6.29□□□□□ -1.4
CAPN3-210ENST00000561817 STX18Q9P2W9 335 aaKnown RBP6.29□□□□□ -1.4
CAPN3-210ENST00000561817 CROTQ9UKG9 612 aa6.29□□□□□ -1.4
CAPN3-210ENST00000561817 PCOLCE2Q9UKZ9 415 aa6.29□□□□□ -1.4
CAPN3-210ENST00000561817 PLAGL1Q9UM63 463 aa6.29□□□□□ -1.4
CAPN3-210ENST00000561817 PPT2Q9UMR5 302 aa6.29□□□□□ -1.4
CAPN3-210ENST00000561817 PSMD13Q9UNM6 376 aa6.29□□□□□ -1.4
CAPN3-210ENST00000561817 KCNK6Q9Y257 313 aa6.29□□□□□ -1.4
CAPN3-210ENST00000561817 ASF1AQ9Y294 204 aa6.29□□□□□ -1.4
CAPN3-210ENST00000561817 L3MBTL1Q9Y468 752 aa6.29□□□□□ -1.4
CAPN3-210ENST00000561817 PCDHA9Q9Y5H5 950 aa6.29□□□□□ -1.4
CAPN3-210ENST00000561817 HS3ST3A1Q9Y663 406 aa6.29□□□□□ -1.4
CAPN3-210ENST00000561817 KCNE2Q9Y6J6 123 aa6.29□□□□□ -1.4
CAPN3-210ENST00000561817 TRBV5-3A0A0A0MS03 114 aa6.28□□□□□ -1.4
CAPN3-210ENST00000561817 PRAMEF33A0A0G2JMD5 474 aa6.28□□□□□ -1.4
CAPN3-210ENST00000561817 LRRC72A6NJI9 287 aa6.28□□□□□ -1.4
CAPN3-210ENST00000561817 FOXE1O00358 373 aaPredicted RBP6.28□□□□□ -1.4
CAPN3-210ENST00000561817 TRIM38O00635 465 aa6.28□□□□□ -1.4
CAPN3-210ENST00000561817 NME4O00746 187 aa6.28□□□□□ -1.4
CAPN3-210ENST00000561817 TOR1BO14657 336 aa6.28□□□□□ -1.4
CAPN3-210ENST00000561817 FPGTO14772 594 aa6.28□□□□□ -1.4
CAPN3-210ENST00000561817 PI15O43692 258 aa6.28□□□□□ -1.4
CAPN3-210ENST00000561817 SEC22BO75396 215 aa6.28□□□□□ -1.4
CAPN3-210ENST00000561817 CIB2O75838 187 aa6.28□□□□□ -1.4
CAPN3-210ENST00000561817 BCAS2O75934 225 aaPredicted RBP6.28□□□□□ -1.4
CAPN3-210ENST00000561817 SEMA4FO95754 770 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms