RNA–Protein interactions for RNA: ENST00000561354.1

CARMIL3-204, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 4

Gene CARMIL3, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-204ENST00000561354 ARMC3Q5W041 872 aa11.18□□□□□ -0.62
CARMIL3-204ENST00000561354 DRICH1Q6PGQ1 229 aaPredicted RBP11.18□□□□□ -0.62
CARMIL3-204ENST00000561354 SYT10Q6XYQ8 523 aa11.18□□□□□ -0.62
CARMIL3-204ENST00000561354 Q6ZPB1 254 aaPredicted RBP11.18□□□□□ -0.62
CARMIL3-204ENST00000561354 PCGF5Q86SE9 256 aa11.18□□□□□ -0.62
CARMIL3-204ENST00000561354 LRRC56Q8IYG6 542 aaPredicted RBP11.18□□□□□ -0.62
CARMIL3-204ENST00000561354 ZNF295-AS1Q8N0V1 137 aa11.18□□□□□ -0.62
CARMIL3-204ENST00000561354 MDS2Q8NDY4 140 aa11.18□□□□□ -0.62
CARMIL3-204ENST00000561354 OR9A4Q8NGU2 314 aa11.18□□□□□ -0.62
CARMIL3-204ENST00000561354 ADAMTS18Q8TE60 1221 aa11.18□□□□□ -0.62
CARMIL3-204ENST00000561354 FAM136AQ96C01 138 aa11.18□□□□□ -0.62
CARMIL3-204ENST00000561354 GPR137Q96N19 417 aa11.18□□□□□ -0.62
CARMIL3-204ENST00000561354 SYBUQ9NX95 663 aa11.18□□□□□ -0.62
CARMIL3-204ENST00000561354 KLHL42Q9P2K6 505 aa11.18□□□□□ -0.62
CARMIL3-204ENST00000561354 SOX13Q9UN79 622 aa11.18□□□□□ -0.62
CARMIL3-204ENST00000561354 VPS9D1Q9Y2B5 631 aa11.18□□□□□ -0.62
CARMIL3-204ENST00000561354 NCOA6Q14686 2063 aaPredicted RBP11.17□□□□□ -0.62
CARMIL3-204ENST00000561354 IGHV3-20A0A0C4DH32 117 aa11.17□□□□□ -0.62
CARMIL3-204ENST00000561354 ASPDHA6ND91 283 aa11.17□□□□□ -0.62
CARMIL3-204ENST00000561354 GOLGA8KD6RF30 607 aa11.17□□□□□ -0.62
CARMIL3-204ENST00000561354 E5RI56 91 aa11.17□□□□□ -0.62
CARMIL3-204ENST00000561354 GOLGA8TH3BQL2 631 aa11.17□□□□□ -0.62
CARMIL3-204ENST00000561354 GFYI3L273 518 aa11.17□□□□□ -0.62
CARMIL3-204ENST00000561354 HAT1O14929 419 aa11.17□□□□□ -0.62
CARMIL3-204ENST00000561354 TTI1O43156 1089 aa11.17□□□□□ -0.62
CARMIL3-204ENST00000561354 WISP2O76076 250 aa11.17□□□□□ -0.62
CARMIL3-204ENST00000561354 SLU7O95391 586 aaKnown RBP11.17□□□□□ -0.62
CARMIL3-204ENST00000561354 HRH2P25021 359 aa11.17□□□□□ -0.62
CARMIL3-204ENST00000561354 MGAT1P26572 445 aa11.17□□□□□ -0.62
CARMIL3-204ENST00000561354 SSTR2P30874 369 aa11.17□□□□□ -0.62
CARMIL3-204ENST00000561354 AGTR2P50052 363 aa11.17□□□□□ -0.62
CARMIL3-204ENST00000561354 CLCN7P51798 805 aa11.17□□□□□ -0.62
CARMIL3-204ENST00000561354 GNG11P61952 73 aa11.17□□□□□ -0.62
CARMIL3-204ENST00000561354 TUBA3CQ13748 450 aa11.17□□□□□ -0.62
CARMIL3-204ENST00000561354 KCNJ11Q14654 390 aa11.17□□□□□ -0.62
CARMIL3-204ENST00000561354 SIX1Q15475 284 aaPredicted RBP11.17□□□□□ -0.62
CARMIL3-204ENST00000561354 EXT1Q16394 746 aa11.17□□□□□ -0.62
CARMIL3-204ENST00000561354 MEP1AQ16819 746 aa11.17□□□□□ -0.62
CARMIL3-204ENST00000561354 TTLL9Q3SXZ7 439 aa11.17□□□□□ -0.62
CARMIL3-204ENST00000561354 MINDY4Q4G0A6 757 aa11.17□□□□□ -0.62
CARMIL3-204ENST00000561354 KIAA0930Q6ICG6 404 aaPredicted RBP11.17□□□□□ -0.62
CARMIL3-204ENST00000561354 TUBA3EQ6PEY2 450 aa11.17□□□□□ -0.62
CARMIL3-204ENST00000561354 CES3Q6UWW8 571 aa11.17□□□□□ -0.62
CARMIL3-204ENST00000561354 LANCL3Q6ZV70 420 aa11.17□□□□□ -0.62
CARMIL3-204ENST00000561354 CENPUQ71F23 418 aa11.17□□□□□ -0.62
CARMIL3-204ENST00000561354 ADCK2Q7Z695 626 aa11.17□□□□□ -0.62
CARMIL3-204ENST00000561354 SPPL2CQ8IUH8 684 aa11.17□□□□□ -0.62
CARMIL3-204ENST00000561354 CILP2Q8IUL8 1156 aa11.17□□□□□ -0.62
CARMIL3-204ENST00000561354 PLD3Q8IV08 490 aa11.17□□□□□ -0.62
CARMIL3-204ENST00000561354 BEST3Q8N1M1 668 aa11.17□□□□□ -0.62
CARMIL3-204ENST00000561354 PPFIBP2Q8ND30 876 aa11.17□□□□□ -0.62
CARMIL3-204ENST00000561354 OR51Q1Q8NH59 317 aa11.17□□□□□ -0.62
CARMIL3-204ENST00000561354 MCOLN3Q8TDD5 553 aa11.17□□□□□ -0.62
CARMIL3-204ENST00000561354 ASB11Q8WXH4 323 aa11.17□□□□□ -0.62
CARMIL3-204ENST00000561354 SCMH1Q96GD3 660 aa11.17□□□□□ -0.62
CARMIL3-204ENST00000561354 MAGED4Q96JG8 741 aa11.17□□□□□ -0.62
CARMIL3-204ENST00000561354 DESI2Q9BSY9 194 aa11.17□□□□□ -0.62
CARMIL3-204ENST00000561354 KCNK13Q9HB14 408 aa11.17□□□□□ -0.62
CARMIL3-204ENST00000561354 TMEM184CQ9NVA4 438 aa11.17□□□□□ -0.62
CARMIL3-204ENST00000561354 INTS10Q9NVR2 710 aaKnown RBP11.17□□□□□ -0.62
CARMIL3-204ENST00000561354 TINAGQ9UJW2 476 aa11.17□□□□□ -0.62
CARMIL3-204ENST00000561354 SCN2AQ99250 2005 aa11.17□□□□□ -0.62
CARMIL3-204ENST00000561354 OTOGQ6ZRI0 2925 aa11.17□□□□□ -0.62
CARMIL3-204ENST00000561354 PDZD2O15018 2839 aa11.16□□□□□ -0.62
CARMIL3-204ENST00000561354 F8P00451 2351 aa11.16□□□□□ -0.62
CARMIL3-204ENST00000561354 H7BY64 318 aa11.16□□□□□ -0.62
CARMIL3-204ENST00000561354 CDK2AP1O14519 115 aa11.16□□□□□ -0.62
CARMIL3-204ENST00000561354 ZBTB14O43829 449 aa11.16□□□□□ -0.62
CARMIL3-204ENST00000561354 CLDN14O95500 239 aa11.16□□□□□ -0.62
CARMIL3-204ENST00000561354 MPC1LP0DKB6 136 aa11.16□□□□□ -0.62
CARMIL3-204ENST00000561354 CD46P15529 392 aa11.16□□□□□ -0.62
CARMIL3-204ENST00000561354 TPSB2P20231 275 aa11.16□□□□□ -0.62
CARMIL3-204ENST00000561354 EEF1DP29692 281 aaKnown RBP11.16□□□□□ -0.62
CARMIL3-204ENST00000561354 CD96P40200 585 aa11.16□□□□□ -0.62
CARMIL3-204ENST00000561354 BCL6P41182 706 aa11.16□□□□□ -0.62
CARMIL3-204ENST00000561354 SKIV2L2P42285 1042 aaKnown RBP11.16□□□□□ -0.62
CARMIL3-204ENST00000561354 XCR1P46094 333 aa11.16□□□□□ -0.62
CARMIL3-204ENST00000561354 RPS15AP62244 130 aaKnown RBP11.16□□□□□ -0.62
CARMIL3-204ENST00000561354 SNRPNP63162 240 aaKnown RBP11.16□□□□□ -0.62
CARMIL3-204ENST00000561354 ALDH6A1Q02252 535 aaKnown RBP11.16□□□□□ -0.62
CARMIL3-204ENST00000561354 TPSAB1Q15661 275 aa11.16□□□□□ -0.62
CARMIL3-204ENST00000561354 THEMIS2Q5TEJ8 643 aa11.16□□□□□ -0.62
CARMIL3-204ENST00000561354 TMEM214Q6NUQ4 689 aaKnown RBP11.16□□□□□ -0.62
CARMIL3-204ENST00000561354 NEPROQ6NW34 567 aa11.16□□□□□ -0.62
CARMIL3-204ENST00000561354 VN1R4Q7Z5H5 301 aa11.16□□□□□ -0.62
CARMIL3-204ENST00000561354 ANKRD37Q7Z713 158 aa11.16□□□□□ -0.62
CARMIL3-204ENST00000561354 CRLF3Q8IUI8 442 aa11.16□□□□□ -0.62
CARMIL3-204ENST00000561354 LGI4Q8N135 537 aa11.16□□□□□ -0.62
CARMIL3-204ENST00000561354 M1APQ8TC57 530 aa11.16□□□□□ -0.62
CARMIL3-204ENST00000561354 MTFMTQ96DP5 389 aaKnown RBP11.16□□□□□ -0.62
CARMIL3-204ENST00000561354 THAP11Q96EK4 314 aa11.16□□□□□ -0.62
CARMIL3-204ENST00000561354 C14orf79Q96F83 325 aa11.16□□□□□ -0.62
CARMIL3-204ENST00000561354 PRAP1Q96NZ9 151 aa11.16□□□□□ -0.62
CARMIL3-204ENST00000561354 SIGLEC12Q96PQ1 595 aa11.16□□□□□ -0.62
CARMIL3-204ENST00000561354 UTP23Q9BRU9 249 aaKnown RBP11.16□□□□□ -0.62
CARMIL3-204ENST00000561354 MMP25Q9NPA2 562 aa11.16□□□□□ -0.62
CARMIL3-204ENST00000561354 MEMO1Q9Y316 297 aa11.16□□□□□ -0.62
CARMIL3-204ENST00000561354 FBN2P35556 2912 aa11.15□□□□□ -0.62
CARMIL3-204ENST00000561354 PCNX1Q96RV3 2341 aa11.15□□□□□ -0.62
CARMIL3-204ENST00000561354 SYF2O95926 243 aaKnown RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms