RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 TNFRSF10AO00220 468 aa8.26□□□□□ -1.09
TRAF3-209ENST00000560463 ARHGAP33O14559 1287 aa8.26□□□□□ -1.09
TRAF3-209ENST00000560463 OR1F1O43749 312 aa8.26□□□□□ -1.09
TRAF3-209ENST00000560463 SDC3O75056 442 aa8.26□□□□□ -1.09
TRAF3-209ENST00000560463 MYO1DO94832 1006 aa8.26□□□□□ -1.09
TRAF3-209ENST00000560463 UBXN7O94888 489 aa8.26□□□□□ -1.09
TRAF3-209ENST00000560463 SEMA3DO95025 777 aa8.26□□□□□ -1.09
TRAF3-209ENST00000560463 EPN2O95208 641 aa8.26□□□□□ -1.09
TRAF3-209ENST00000560463 CBX6O95503 412 aa8.26□□□□□ -1.09
TRAF3-209ENST00000560463 CFIP05156 583 aa8.26□□□□□ -1.09
TRAF3-209ENST00000560463 SNRPB2P08579 225 aaKnown RBP8.26□□□□□ -1.09
TRAF3-209ENST00000560463 PNLIPP16233 465 aa8.26□□□□□ -1.09
TRAF3-209ENST00000560463 GLB1P16278 677 aa8.26□□□□□ -1.09
TRAF3-209ENST00000560463 UGT2B7P16662 529 aa8.26□□□□□ -1.09
TRAF3-209ENST00000560463 AMD1P17707 334 aa8.26□□□□□ -1.09
TRAF3-209ENST00000560463 POLR2CP19387 275 aaPredicted RBP8.26□□□□□ -1.09
TRAF3-209ENST00000560463 PIK3R1P27986 724 aa8.26□□□□□ -1.09
TRAF3-209ENST00000560463 PTPN4P29074 926 aa8.26□□□□□ -1.09
TRAF3-209ENST00000560463 GRIA3P42263 894 aa8.26□□□□□ -1.09
TRAF3-209ENST00000560463 GPR3P46089 330 aa8.26□□□□□ -1.09
TRAF3-209ENST00000560463 CCT8P50990 548 aa8.26□□□□□ -1.09
TRAF3-209ENST00000560463 DIO3P55073 304 aa8.26□□□□□ -1.09
TRAF3-209ENST00000560463 RPS15AP62244 130 aaKnown RBP8.26□□□□□ -1.09
TRAF3-209ENST00000560463 RPS13P62277 151 aaKnown RBP8.26□□□□□ -1.09
TRAF3-209ENST00000560463 RPL38P63173 70 aaKnown RBP8.26□□□□□ -1.09
TRAF3-209ENST00000560463 HMGCS1Q01581 520 aa8.26□□□□□ -1.09
TRAF3-209ENST00000560463 MEF2AQ02078 507 aaPredicted RBP8.26□□□□□ -1.09
TRAF3-209ENST00000560463 ACSM2AQ08AH3 577 aa8.26□□□□□ -1.09
TRAF3-209ENST00000560463 DDX39BQ13838 428 aaKnown RBP8.26□□□□□ -1.09
TRAF3-209ENST00000560463 CYLC2Q14093 348 aaPredicted RBP8.26□□□□□ -1.09
TRAF3-209ENST00000560463 NR1D2Q14995 579 aa8.26□□□□□ -1.09
TRAF3-209ENST00000560463 SHBQ15464 509 aa8.26□□□□□ -1.09
TRAF3-209ENST00000560463 HLA-BQ31612 363 aa8.26□□□□□ -1.09
TRAF3-209ENST00000560463 AGKQ53H12 422 aa8.26□□□□□ -1.09
TRAF3-209ENST00000560463 IL23RQ5VWK5 629 aa8.26□□□□□ -1.09
TRAF3-209ENST00000560463 KIAA1614Q5VZ46 1190 aa8.26□□□□□ -1.09
TRAF3-209ENST00000560463 FAM219BQ5XKK7 198 aa8.26□□□□□ -1.09
TRAF3-209ENST00000560463 ACSM2BQ68CK6 577 aa8.26□□□□□ -1.09
TRAF3-209ENST00000560463 ZCCHC8Q6NZY4 707 aaKnown RBP8.26□□□□□ -1.09
TRAF3-209ENST00000560463 GALNT18Q6P9A2 607 aa8.26□□□□□ -1.09
TRAF3-209ENST00000560463 PRR23BQ6ZRT6 265 aa8.26□□□□□ -1.09
TRAF3-209ENST00000560463 KANSL1Q7Z3B3 1105 aa8.26□□□□□ -1.09
TRAF3-209ENST00000560463 ADCK2Q7Z695 626 aa8.26□□□□□ -1.09
TRAF3-209ENST00000560463 PAQR7Q86WK9 346 aa8.26□□□□□ -1.09
TRAF3-209ENST00000560463 GLB1L3Q8NCI6 653 aaPredicted RBP8.26□□□□□ -1.09
TRAF3-209ENST00000560463 ZNF740Q8NDX6 193 aa8.26□□□□□ -1.09
TRAF3-209ENST00000560463 SAP25Q8TEE9 199 aa8.26□□□□□ -1.09
TRAF3-209ENST00000560463 CHTF18Q8WVB6 975 aa8.26□□□□□ -1.09
TRAF3-209ENST00000560463 THAP11Q96EK4 314 aa8.26□□□□□ -1.09
TRAF3-209ENST00000560463 C11orf24Q96F05 449 aaPredicted RBP8.26□□□□□ -1.09
TRAF3-209ENST00000560463 CENPKQ9BS16 269 aa8.26□□□□□ -1.09
TRAF3-209ENST00000560463 RTKNQ9BST9 563 aa8.26□□□□□ -1.09
TRAF3-209ENST00000560463 SLC25A23Q9BV35 468 aa8.26□□□□□ -1.09
TRAF3-209ENST00000560463 SPNS1Q9H2V7 528 aa8.26□□□□□ -1.09
TRAF3-209ENST00000560463 CAAP1Q9H8G2 361 aa8.26□□□□□ -1.09
TRAF3-209ENST00000560463 SLC6A20Q9NP91 592 aa8.26□□□□□ -1.09
TRAF3-209ENST00000560463 UCKL1Q9NWZ5 548 aa8.26□□□□□ -1.09
TRAF3-209ENST00000560463 ACTR10Q9NZ32 417 aa8.26□□□□□ -1.09
TRAF3-209ENST00000560463 GIMAP2Q9UG22 337 aa8.26□□□□□ -1.09
TRAF3-209ENST00000560463 RAB23Q9ULC3 237 aa8.26□□□□□ -1.09
TRAF3-209ENST00000560463 G3BP2Q9UN86 482 aaKnown RBP8.26□□□□□ -1.09
TRAF3-209ENST00000560463 POLR3HQ9Y535 204 aaPredicted RBP8.26□□□□□ -1.09
TRAF3-209ENST00000560463 AP1M2Q9Y6Q5 423 aa8.26□□□□□ -1.09
TRAF3-209ENST00000560463 FER1L5A0AVI2 2057 aa8.25□□□□□ -1.09
TRAF3-209ENST00000560463 NINQ8N4C6 2090 aa8.25□□□□□ -1.09
TRAF3-209ENST00000560463 FEZF1A0PJY2 475 aa8.25□□□□□ -1.09
TRAF3-209ENST00000560463 OR2A25A4D2G3 310 aa8.25□□□□□ -1.09
TRAF3-209ENST00000560463 BBIP1A8MTZ0 92 aa8.25□□□□□ -1.09
TRAF3-209ENST00000560463 B2RBV5 119 aa8.25□□□□□ -1.09
TRAF3-209ENST00000560463 PRMT3O60678 531 aa8.25□□□□□ -1.09
TRAF3-209ENST00000560463 SLC22A3O75751 556 aa8.25□□□□□ -1.09
TRAF3-209ENST00000560463 PROS1P07225 676 aa8.25□□□□□ -1.09
TRAF3-209ENST00000560463 ZNF883P0CG24 379 aa8.25□□□□□ -1.09
TRAF3-209ENST00000560463 GIMD1P0DJR0 217 aa8.25□□□□□ -1.09
TRAF3-209ENST00000560463 JAK1P23458 1154 aa8.25□□□□□ -1.09
TRAF3-209ENST00000560463 TSFMP43897 325 aaKnown RBP8.25□□□□□ -1.09
TRAF3-209ENST00000560463 GSTM5P46439 218 aa8.25□□□□□ -1.09
TRAF3-209ENST00000560463 ASMTP46597 345 aa8.25□□□□□ -1.09
TRAF3-209ENST00000560463 CAPZBP47756 277 aa8.25□□□□□ -1.09
TRAF3-209ENST00000560463 CLNS1AP54105 237 aaKnown RBP8.25□□□□□ -1.09
TRAF3-209ENST00000560463 MAZP56270 477 aaKnown RBP8.25□□□□□ -1.09
TRAF3-209ENST00000560463 NCALDP61601 193 aa8.25□□□□□ -1.09
TRAF3-209ENST00000560463 YBX1P67809 324 aaKnown RBP8.25□□□□□ -1.09
TRAF3-209ENST00000560463 GPLD1P80108 840 aa8.25□□□□□ -1.09
TRAF3-209ENST00000560463 TBL3Q12788 808 aaKnown RBP8.25□□□□□ -1.09
TRAF3-209ENST00000560463 TMEM35AQ53FP2 167 aa8.25□□□□□ -1.09
TRAF3-209ENST00000560463 TRIM61Q5EBN2 209 aa8.25□□□□□ -1.09
TRAF3-209ENST00000560463 COQ5Q5HYK3 327 aa8.25□□□□□ -1.09
TRAF3-209ENST00000560463 DEPDC1Q5TB30 811 aa8.25□□□□□ -1.09
TRAF3-209ENST00000560463 NOXRED1Q6NXP6 359 aa8.25□□□□□ -1.09
TRAF3-209ENST00000560463 FIGLAQ6QHK4 219 aa8.25□□□□□ -1.09
TRAF3-209ENST00000560463 BLOC1S3Q6QNY0 202 aa8.25□□□□□ -1.09
TRAF3-209ENST00000560463 CYP20A1Q6UW02 462 aa8.25□□□□□ -1.09
TRAF3-209ENST00000560463 PAGE2Q7Z2X7 111 aa8.25□□□□□ -1.09
TRAF3-209ENST00000560463 ZNF438Q7Z4V0 828 aa8.25□□□□□ -1.09
TRAF3-209ENST00000560463 SFTPA2Q8IWL1 248 aa8.25□□□□□ -1.09
TRAF3-209ENST00000560463 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.25□□□□□ -1.092e-6■■■■■ 81.2
TRAF3-209ENST00000560463 CARFQ8N187 725 aa8.25□□□□□ -1.09
TRAF3-209ENST00000560463 METTL4Q8N3J2 472 aa8.25□□□□□ -1.09
TRAF3-209ENST00000560463 LIX1Q8N485 282 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms