RNA–Protein interactions for RNA: ENST00000560424.1

SMAD3-215, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-215ENST00000560424 UGT1A10Q9HAW8 530 aa8.87□□□□□ -0.99
SMAD3-215ENST00000560424 UGT1A8Q9HAW9 530 aa8.87□□□□□ -0.99
SMAD3-215ENST00000560424 IL26Q9NPH9 171 aa8.87□□□□□ -0.99
SMAD3-215ENST00000560424 CHRAC1Q9NRG0 131 aa8.87□□□□□ -0.99
SMAD3-215ENST00000560424 SMYD2Q9NRG4 433 aa8.87□□□□□ -0.99
SMAD3-215ENST00000560424 CCM2LQ9NUG4 571 aaPredicted RBP8.87□□□□□ -0.99
SMAD3-215ENST00000560424 EDARQ9UNE0 448 aa8.87□□□□□ -0.99
SMAD3-215ENST00000560424 PLCL2Q9UPR0 1127 aa8.87□□□□□ -0.99
SMAD3-215ENST00000560424 PKP3Q9Y446 797 aa8.87□□□□□ -0.99
SMAD3-215ENST00000560424 IKBKGQ9Y6K9 419 aa8.87□□□□□ -0.99
SMAD3-215ENST00000560424 A0A0J9YY10 115 aa8.86□□□□□ -0.99
SMAD3-215ENST00000560424 H7C0S8 307 aa8.86□□□□□ -0.99
SMAD3-215ENST00000560424 AURKAO14965 403 aa8.86□□□□□ -0.99
SMAD3-215ENST00000560424 PRPF4O43172 522 aaKnown RBP eCLIP8.86□□□□□ -0.99
SMAD3-215ENST00000560424 GPR39O43194 453 aa8.86□□□□□ -0.99
SMAD3-215ENST00000560424 PRAMEF1O95521 474 aa8.86□□□□□ -0.99
SMAD3-215ENST00000560424 CRTAMO95727 393 aa8.86□□□□□ -0.99
SMAD3-215ENST00000560424 TSPAN12O95859 305 aa8.86□□□□□ -0.99
SMAD3-215ENST00000560424 SNRPAP09012 282 aaKnown RBP8.86□□□□□ -0.99
SMAD3-215ENST00000560424 RALBP11234 206 aa8.86□□□□□ -0.99
SMAD3-215ENST00000560424 UGT2B7P16662 529 aa8.86□□□□□ -0.99
SMAD3-215ENST00000560424 CXCR2P25025 360 aa8.86□□□□□ -0.99
SMAD3-215ENST00000560424 ARNTP27540 789 aa8.86□□□□□ -0.99
SMAD3-215ENST00000560424 GP5P40197 560 aa8.86□□□□□ -0.99
SMAD3-215ENST00000560424 CHRNA4P43681 627 aa8.86□□□□□ -0.99
SMAD3-215ENST00000560424 SLCO1A2P46721 670 aa8.86□□□□□ -0.99
SMAD3-215ENST00000560424 CSE1LP55060 971 aaKnown RBP8.86□□□□□ -0.99
SMAD3-215ENST00000560424 MAGOHP61326 146 aaKnown RBP8.86□□□□□ -0.99
SMAD3-215ENST00000560424 AP2B1P63010 937 aa8.86□□□□□ -0.99
SMAD3-215ENST00000560424 TMPRSS15P98073 1019 aa8.86□□□□□ -0.99
SMAD3-215ENST00000560424 CACNG1Q06432 222 aa8.86□□□□□ -0.99
SMAD3-215ENST00000560424 FOXD4Q12950 439 aaPredicted RBP8.86□□□□□ -0.99
SMAD3-215ENST00000560424 PRKG2Q13237 762 aa8.86□□□□□ -0.99
SMAD3-215ENST00000560424 POU6F1Q14863 301 aa8.86□□□□□ -0.99
SMAD3-215ENST00000560424 TAF1AQ15573 450 aaPredicted RBP8.86□□□□□ -0.99
SMAD3-215ENST00000560424 CEBPEQ15744 281 aa8.86□□□□□ -0.99
SMAD3-215ENST00000560424 KRTCAP3Q53RY4 240 aa8.86□□□□□ -0.99
SMAD3-215ENST00000560424 TSTD2Q5T7W7 516 aa8.86□□□□□ -0.99
SMAD3-215ENST00000560424 TEDDM1Q5T9Z0 273 aa8.86□□□□□ -0.99
SMAD3-215ENST00000560424 GRTP1Q5TC63 336 aa8.86□□□□□ -0.99
SMAD3-215ENST00000560424 ABHD17BQ5VST6 288 aa8.86□□□□□ -0.99
SMAD3-215ENST00000560424 GLT6D1Q7Z4J2 308 aa8.86□□□□□ -0.99
SMAD3-215ENST00000560424 TMEM151BQ8IW70 566 aa8.86□□□□□ -0.99
SMAD3-215ENST00000560424 FAM20CQ8IXL6 584 aa8.86□□□□□ -0.99
SMAD3-215ENST00000560424 CYP4X1Q8N118 509 aa8.86□□□□□ -0.99
SMAD3-215ENST00000560424 PPM1NQ8N819 430 aa8.86□□□□□ -0.99
SMAD3-215ENST00000560424 TTC29Q8NA56 475 aaPredicted RBP8.86□□□□□ -0.99
SMAD3-215ENST00000560424 HM13Q8TCT9 377 aa8.86□□□□□ -0.99
SMAD3-215ENST00000560424 CALML6Q8TD86 181 aa8.86□□□□□ -0.99
SMAD3-215ENST00000560424 STYXQ8WUJ0 223 aa8.86□□□□□ -0.99
SMAD3-215ENST00000560424 ZNF669Q96BR6 464 aaPredicted RBP8.86□□□□□ -0.99
SMAD3-215ENST00000560424 MFSD3Q96ES6 412 aa8.86□□□□□ -0.99
SMAD3-215ENST00000560424 FAM167BQ9BTA0 163 aa8.86□□□□□ -0.99
SMAD3-215ENST00000560424 SLC26A1Q9H2B4 701 aa8.86□□□□□ -0.99
SMAD3-215ENST00000560424 CXXC4Q9H2H0 198 aa8.86□□□□□ -0.99
SMAD3-215ENST00000560424 MVB12BQ9H7P6 319 aa8.86□□□□□ -0.99
SMAD3-215ENST00000560424 SLC24A3Q9HC58 644 aa8.86□□□□□ -0.99
SMAD3-215ENST00000560424 PIH1D1Q9NWS0 290 aaKnown RBP8.86□□□□□ -0.99
SMAD3-215ENST00000560424 MKS1Q9NXB0 559 aa8.86□□□□□ -0.99
SMAD3-215ENST00000560424 PSD3Q9NYI0 1048 aa8.86□□□□□ -0.99
SMAD3-215ENST00000560424 ZFATQ9P243 1243 aa8.86□□□□□ -0.99
SMAD3-215ENST00000560424 TNFRSF10DQ9UBN6 386 aa8.86□□□□□ -0.99
SMAD3-215ENST00000560424 TEKT2Q9UIF3 430 aa8.86□□□□□ -0.99
SMAD3-215ENST00000560424 PPT2Q9UMR5 302 aa8.86□□□□□ -0.99
SMAD3-215ENST00000560424 ZNF469Q96JG9 3925 aaPredicted RBP8.85□□□□□ -0.99
SMAD3-215ENST00000560424 OR5H15A6NDH6 313 aa8.85□□□□□ -0.99
SMAD3-215ENST00000560424 CXorf49A8MYA2 514 aaPredicted RBP8.85□□□□□ -0.99
SMAD3-215ENST00000560424 ISM1B1AKI9 464 aa8.85□□□□□ -0.99
SMAD3-215ENST00000560424 POC1B-GALNT4F8VUJ3 575 aa8.85□□□□□ -0.99
SMAD3-215ENST00000560424 H3BMH7 237 aa8.85□□□□□ -0.99
SMAD3-215ENST00000560424 PRRG2O14669 202 aa8.85□□□□□ -0.99
SMAD3-215ENST00000560424 KDM1AO60341 852 aa8.85□□□□□ -0.99
SMAD3-215ENST00000560424 BMP10O95393 424 aa8.85□□□□□ -0.99
SMAD3-215ENST00000560424 WDPCPO95876 746 aa8.85□□□□□ -0.99
SMAD3-215ENST00000560424 PRR35P0CG20 571 aa8.85□□□□□ -0.99
SMAD3-215ENST00000560424 TPH1P17752 444 aa8.85□□□□□ -0.99
SMAD3-215ENST00000560424 NMBRP28336 390 aa8.85□□□□□ -0.99
SMAD3-215ENST00000560424 ADSLP30566 484 aaPredicted RBP8.85□□□□□ -0.99
SMAD3-215ENST00000560424 SHMT2P34897 504 aa8.85□□□□□ -0.99
SMAD3-215ENST00000560424 ZNF140P52738 457 aaPredicted RBP8.85□□□□□ -0.99
SMAD3-215ENST00000560424 PMP22Q01453 160 aa8.85□□□□□ -0.99
SMAD3-215ENST00000560424 ALDH6A1Q02252 535 aaKnown RBP8.85□□□□□ -0.99
SMAD3-215ENST00000560424 SLC18A2Q05940 514 aa8.85□□□□□ -0.99
SMAD3-215ENST00000560424 EFTUD2Q15029 972 aaKnown RBP eCLIP8.85□□□□□ -0.99
SMAD3-215ENST00000560424 PCOLCEQ15113 449 aa8.85□□□□□ -0.99
SMAD3-215ENST00000560424 BCL7AQ4VC05 210 aa8.85□□□□□ -0.99
SMAD3-215ENST00000560424 PACS1Q6VY07 963 aa8.85□□□□□ -0.99
SMAD3-215ENST00000560424 CAPN12Q6ZSI9 719 aa8.85□□□□□ -0.99
SMAD3-215ENST00000560424 SH2D5Q6ZV89 423 aa8.85□□□□□ -0.99
SMAD3-215ENST00000560424 NCCRP1Q6ZVX7 275 aaPredicted RBP8.85□□□□□ -0.99
SMAD3-215ENST00000560424 NDUFAF7Q7L592 441 aa8.85□□□□□ -0.99
SMAD3-215ENST00000560424 BIVMQ86UB2 503 aa8.85□□□□□ -0.99
SMAD3-215ENST00000560424 PRSS58Q8IYP2 241 aa8.85□□□□□ -0.99
SMAD3-215ENST00000560424 ADGRF3Q8IZF5 1079 aa8.85□□□□□ -0.99
SMAD3-215ENST00000560424 PHC3Q8NDX5 983 aa8.85□□□□□ -0.99
SMAD3-215ENST00000560424 OR13J1Q8NGT2 312 aa8.85□□□□□ -0.99
SMAD3-215ENST00000560424 DTX3LQ8TDB6 740 aa8.85□□□□□ -0.99
SMAD3-215ENST00000560424 ACMSDQ8TDX5 336 aa8.85□□□□□ -0.99
SMAD3-215ENST00000560424 AGAP11Q8TF27 550 aa8.85□□□□□ -0.99
SMAD3-215ENST00000560424 THAP3Q8WTV1 239 aaPredicted RBP8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms