RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 TMEM71Q6P5X7 295 aa10□□□□□ -0.81
TPM1-221ENST00000559831 WDR74Q6RFH5 385 aaPredicted RBP10□□□□□ -0.81
TPM1-221ENST00000559831 ACAD11Q709F0 780 aa10□□□□□ -0.81
TPM1-221ENST00000559831 LAS2Q8IYD9 372 aa10□□□□□ -0.81
TPM1-221ENST00000559831 HUS1BQ8NHY5 278 aa10□□□□□ -0.81
TPM1-221ENST00000559831 BAHD1Q8TBE0 780 aaPredicted RBP10□□□□□ -0.81
TPM1-221ENST00000559831 WDR20Q8TBZ3 569 aa10□□□□□ -0.81
TPM1-221ENST00000559831 BCAS4Q8TDM0 211 aa10□□□□□ -0.81
TPM1-221ENST00000559831 C10orf82Q8WW14 230 aa10□□□□□ -0.81
TPM1-221ENST00000559831 USP7Q93009 1102 aa10□□□□□ -0.81
TPM1-221ENST00000559831 ZUFSPQ96AP4 578 aa10□□□□□ -0.81
TPM1-221ENST00000559831 GFM1Q96RP9 751 aaKnown RBP10□□□□□ -0.81
TPM1-221ENST00000559831 CD180Q99467 661 aa10□□□□□ -0.81
TPM1-221ENST00000559831 MTERF1Q99551 399 aaKnown RBP10□□□□□ -0.81
TPM1-221ENST00000559831 CDC6Q99741 560 aa10□□□□□ -0.81
TPM1-221ENST00000559831 EBF4Q9BQW3 602 aa10□□□□□ -0.81
TPM1-221ENST00000559831 SIKE1Q9BRV8 207 aa10□□□□□ -0.81
TPM1-221ENST00000559831 PITHD1Q9GZP4 211 aaPredicted RBP10□□□□□ -0.81
TPM1-221ENST00000559831 TUBB1Q9H4B7 451 aa10□□□□□ -0.81
TPM1-221ENST00000559831 WDR55Q9H6Y2 383 aaPredicted RBP10□□□□□ -0.81
TPM1-221ENST00000559831 NT5DC2Q9H857 520 aa10□□□□□ -0.81
TPM1-221ENST00000559831 MEAF6Q9HAF1 191 aa10□□□□□ -0.81
TPM1-221ENST00000559831 KCNK13Q9HB14 408 aa10□□□□□ -0.81
TPM1-221ENST00000559831 PFDN4Q9NQP4 134 aa10□□□□□ -0.81
TPM1-221ENST00000559831 C1GALT1Q9NS00 363 aa10□□□□□ -0.81
TPM1-221ENST00000559831 PSD3Q9NYI0 1048 aa10□□□□□ -0.81
TPM1-221ENST00000559831 MN1Q10571 1320 aaPredicted RBP10□□□□□ -0.81
TPM1-221ENST00000559831 IGHV5-51A0A0C4DH38 117 aa9.99□□□□□ -0.81
TPM1-221ENST00000559831 ATP6AP2A0A1C7CYW4 349 aa9.99□□□□□ -0.81
TPM1-221ENST00000559831 MAGEB17A8MXT2 336 aa9.99□□□□□ -0.81
TPM1-221ENST00000559831 AGRPO00253 132 aa9.99□□□□□ -0.81
TPM1-221ENST00000559831 SLC28A1O00337 649 aa9.99□□□□□ -0.81
TPM1-221ENST00000559831 SDHDO14521 159 aa9.99□□□□□ -0.81
TPM1-221ENST00000559831 MAP3K7O43318 606 aa9.99□□□□□ -0.81
TPM1-221ENST00000559831 RGS14O43566 566 aa9.99□□□□□ -0.81
TPM1-221ENST00000559831 SNX3O60493 162 aa9.99□□□□□ -0.81
TPM1-221ENST00000559831 CTSVO60911 334 aa9.99□□□□□ -0.81
TPM1-221ENST00000559831 CBFA2T3O75081 653 aa9.99□□□□□ -0.81
TPM1-221ENST00000559831 ATP6AP2O75787 350 aa9.99□□□□□ -0.81
TPM1-221ENST00000559831 C9P02748 559 aa9.99□□□□□ -0.81
TPM1-221ENST00000559831 EZRP15311 586 aaKnown RBP9.99□□□□□ -0.81
TPM1-221ENST00000559831 ALOX15P16050 662 aaPredicted RBP9.99□□□□□ -0.81
TPM1-221ENST00000559831 EPHA3P29320 983 aa9.99□□□□□ -0.81
TPM1-221ENST00000559831 ACADVLP49748 655 aa9.99□□□□□ -0.81
TPM1-221ENST00000559831 INHBCP55103 352 aa9.99□□□□□ -0.81
TPM1-221ENST00000559831 HMGCS1Q01581 520 aa9.99□□□□□ -0.81
TPM1-221ENST00000559831 SPIDRQ14159 915 aa9.99□□□□□ -0.81
TPM1-221ENST00000559831 NR6A1Q15406 480 aa9.99□□□□□ -0.81
TPM1-221ENST00000559831 GALNTL6Q49A17 601 aa9.99□□□□□ -0.81
TPM1-221ENST00000559831 GKAP1Q5VSY0 366 aaPredicted RBP9.99□□□□□ -0.81
TPM1-221ENST00000559831 EPGNQ6UW88 154 aa9.99□□□□□ -0.81
TPM1-221ENST00000559831 TMPRSS9Q7Z410 1059 aa9.99□□□□□ -0.81
TPM1-221ENST00000559831 CHCHD4Q8N4Q1 142 aa9.99□□□□□ -0.81
TPM1-221ENST00000559831 ANKRD53Q8N9V6 530 aa9.99□□□□□ -0.81
TPM1-221ENST00000559831 MFSD9Q8NBP5 474 aa9.99□□□□□ -0.81
TPM1-221ENST00000559831 DEFB124Q8NES8 71 aa9.99□□□□□ -0.81
TPM1-221ENST00000559831 OR2T11Q8NH01 316 aa9.99□□□□□ -0.81
TPM1-221ENST00000559831 TUBGCP3Q96CW5 907 aa9.99□□□□□ -0.81
TPM1-221ENST00000559831 FAM122AQ96E09 287 aa9.99□□□□□ -0.81
TPM1-221ENST00000559831 C3orf30Q96M34 536 aa9.99□□□□□ -0.81
TPM1-221ENST00000559831 RILPQ96NA2 401 aa9.99□□□□□ -0.81
TPM1-221ENST00000559831 FCRL4Q96PJ5 515 aa9.99□□□□□ -0.81
TPM1-221ENST00000559831 OR52B2Q96RD2 323 aa9.99□□□□□ -0.81
TPM1-221ENST00000559831 ZFYVE21Q9BQ24 234 aa9.99□□□□□ -0.81
TPM1-221ENST00000559831 DMRT3Q9NQL9 472 aa9.99□□□□□ -0.81
TPM1-221ENST00000559831 RIC8BQ9NVN3 520 aa9.99□□□□□ -0.81
TPM1-221ENST00000559831 GIMAP2Q9UG22 337 aa9.99□□□□□ -0.81
TPM1-221ENST00000559831 G3BP2Q9UN86 482 aaKnown RBP9.99□□□□□ -0.81
TPM1-221ENST00000559831 SLC12A4Q9UP95 1085 aa9.99□□□□□ -0.81
TPM1-221ENST00000559831 APOBEC2Q9Y235 224 aaKnown RBP9.99□□□□□ -0.81
TPM1-221ENST00000559831 PCDHGA4Q9Y5G9 962 aa9.99□□□□□ -0.81
TPM1-221ENST00000559831 SCN3AQ9NY46 2000 aa9.99□□□□□ -0.81
TPM1-221ENST00000559831 EP300Q09472 2414 aaPredicted RBP9.98□□□□□ -0.81
TPM1-221ENST00000559831 D6RAR5 112 aa9.98□□□□□ -0.81
TPM1-221ENST00000559831 NDUFS4O43181 175 aa9.98□□□□□ -0.81
TPM1-221ENST00000559831 RFPL3O75679 317 aa9.98□□□□□ -0.81
TPM1-221ENST00000559831 ZBTB11O95625 1053 aaPredicted RBP9.98□□□□□ -0.81
TPM1-221ENST00000559831 TGFB1P01137 390 aa9.98□□□□□ -0.81
TPM1-221ENST00000559831 EIF2S1P05198 315 aaKnown RBP9.98□□□□□ -0.81
TPM1-221ENST00000559831 GP1BAP07359 652 aa9.98□□□□□ -0.81
TPM1-221ENST00000559831 SERPINB1P30740 379 aa9.98□□□□□ -0.81
TPM1-221ENST00000559831 AHRP35869 848 aa9.98□□□□□ -0.81
TPM1-221ENST00000559831 PIK3CBP42338 1070 aa9.98□□□□□ -0.81
TPM1-221ENST00000559831 CSTF3Q12996 717 aaKnown RBP9.98□□□□□ -0.81
TPM1-221ENST00000559831 SQSTM1Q13501 440 aa9.98□□□□□ -0.81
TPM1-221ENST00000559831 XKR7Q5GH72 579 aa9.98□□□□□ -0.81
TPM1-221ENST00000559831 SPDYAQ5MJ70 313 aa9.98□□□□□ -0.81
TPM1-221ENST00000559831 PHF19Q5T6S3 580 aa9.98□□□□□ -0.81
TPM1-221ENST00000559831 FBXO42Q6P3S6 717 aa9.98□□□□□ -0.81
TPM1-221ENST00000559831 ZNF574Q6ZN55 896 aaPredicted RBP9.98□□□□□ -0.81
TPM1-221ENST00000559831 RNF44Q7L0R7 432 aa9.98□□□□□ -0.81
TPM1-221ENST00000559831 PRSS42Q7Z5A4 293 aa9.98□□□□□ -0.81
TPM1-221ENST00000559831 VN1R5Q7Z5H4 357 aa9.98□□□□□ -0.81
TPM1-221ENST00000559831 PIGWQ7Z7B1 504 aa9.98□□□□□ -0.81
TPM1-221ENST00000559831 PIP4P1Q86T03 277 aa9.98□□□□□ -0.81
TPM1-221ENST00000559831 ASPGQ86U10 573 aa9.98□□□□□ -0.81
TPM1-221ENST00000559831 HOMEZQ8IX15 550 aa9.98□□□□□ -0.81
TPM1-221ENST00000559831 KIAA2013Q8IYS2 634 aa9.98□□□□□ -0.81
TPM1-221ENST00000559831 CCDC197Q8NCU1 140 aa9.98□□□□□ -0.81
TPM1-221ENST00000559831 TTLQ8NG68 377 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms