RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 ATG16L2Q8NAA4 619 aa9.69□□□□□ -0.86
LRRC28-216ENST00000559819 KLHL23Q8NBE8 558 aa9.69□□□□□ -0.86
LRRC28-216ENST00000559819 OR8J2Q8NGG1 315 aa9.69□□□□□ -0.86
LRRC28-216ENST00000559819 CLP1Q92989 425 aaKnown RBP9.69□□□□□ -0.86
LRRC28-216ENST00000559819 TMEM159Q96B96 161 aa9.69□□□□□ -0.86
LRRC28-216ENST00000559819 SPHK2Q9NRA0 654 aa9.69□□□□□ -0.86
LRRC28-216ENST00000559819 FAIMQ9NVQ4 179 aa9.69□□□□□ -0.86
LRRC28-216ENST00000559819 THUMPD1Q9NXG2 353 aaKnown RBP9.69□□□□□ -0.86
LRRC28-216ENST00000559819 KIF17Q9P2E2 1029 aa9.69□□□□□ -0.86
LRRC28-216ENST00000559819 RPS6KA6Q9UK32 745 aa9.69□□□□□ -0.86
LRRC28-216ENST00000559819 PCDHGA10Q9Y5H3 936 aa9.69□□□□□ -0.86
LRRC28-216ENST00000559819 GMEB1Q9Y692 573 aa9.69□□□□□ -0.86
LRRC28-216ENST00000559819 ABHD14A-ACY1A0A1B0GW23 586 aa9.69□□□□□ -0.86
LRRC28-216ENST00000559819 KPNA5O15131 536 aa9.69□□□□□ -0.86
LRRC28-216ENST00000559819 UGT2B11O75310 529 aa9.69□□□□□ -0.86
LRRC28-216ENST00000559819 CLPXO76031 633 aa9.69□□□□□ -0.86
LRRC28-216ENST00000559819 MYO1DO94832 1006 aa9.69□□□□□ -0.86
LRRC28-216ENST00000559819 FADS2O95864 444 aaKnown RBP9.69□□□□□ -0.86
LRRC28-216ENST00000559819 MT-ND2P03891 347 aa9.69□□□□□ -0.86
LRRC28-216ENST00000559819 CCDC159P0C7I6 412 aa9.69□□□□□ -0.86
LRRC28-216ENST00000559819 POLR2EP19388 210 aaKnown RBP9.69□□□□□ -0.86
LRRC28-216ENST00000559819 FPR1P21462 350 aa9.69□□□□□ -0.86
LRRC28-216ENST00000559819 MASP1P48740 699 aa9.69□□□□□ -0.86
LRRC28-216ENST00000559819 ERVFC1P60507 584 aa9.69□□□□□ -0.86
LRRC28-216ENST00000559819 ATP1A4Q13733 1029 aa9.69□□□□□ -0.86
LRRC28-216ENST00000559819 ACOX1Q15067 660 aa9.69□□□□□ -0.86
LRRC28-216ENST00000559819 CTF1Q16619 201 aa9.69□□□□□ -0.86
LRRC28-216ENST00000559819 IER5LQ5T953 404 aa9.69□□□□□ -0.86
LRRC28-216ENST00000559819 CPTPQ5TA50 214 aa9.69□□□□□ -0.86
LRRC28-216ENST00000559819 CCDC149Q6ZUS6 474 aa9.69□□□□□ -0.86
LRRC28-216ENST00000559819 BTLAQ7Z6A9 289 aa9.69□□□□□ -0.86
LRRC28-216ENST00000559819 ABHD11Q8NFV4 315 aa9.69□□□□□ -0.86
LRRC28-216ENST00000559819 OR7G3Q8NG95 312 aa9.69□□□□□ -0.86
LRRC28-216ENST00000559819 BTN2A2Q8WVV5 523 aa9.69□□□□□ -0.86
LRRC28-216ENST00000559819 NEIL2Q969S2 332 aa9.69□□□□□ -0.86
LRRC28-216ENST00000559819 ERLEC1Q96DZ1 483 aa9.69□□□□□ -0.86
LRRC28-216ENST00000559819 C11orf24Q96F05 449 aaPredicted RBP9.69□□□□□ -0.86
LRRC28-216ENST00000559819 TMEM121BQ9BXQ6 578 aaPredicted RBP9.69□□□□□ -0.86
LRRC28-216ENST00000559819 KRT84Q9NSB2 600 aa9.69□□□□□ -0.86
LRRC28-216ENST00000559819 IRAK4Q9NWZ3 460 aa9.69□□□□□ -0.86
LRRC28-216ENST00000559819 FAM120CQ9NX05 1096 aaKnown RBP9.69□□□□□ -0.86
LRRC28-216ENST00000559819 LMCD1Q9NZU5 365 aa9.69□□□□□ -0.86
LRRC28-216ENST00000559819 SH3BP4Q9P0V3 963 aa9.69□□□□□ -0.86
LRRC28-216ENST00000559819 EXO1Q9UQ84 846 aaKnown RBP9.69□□□□□ -0.86
LRRC28-216ENST00000559819 GNG14A0A1W2PPG7 69 aa9.68□□□□□ -0.86
LRRC28-216ENST00000559819 SLC5A10A0PJK1 596 aa9.68□□□□□ -0.86
LRRC28-216ENST00000559819 TMEM229AB2RXF0 380 aa9.68□□□□□ -0.86
LRRC28-216ENST00000559819 AP2A2O94973 939 aa9.68□□□□□ -0.86
LRRC28-216ENST00000559819 IDSP22304 550 aa9.68□□□□□ -0.86
LRRC28-216ENST00000559819 XPAP23025 273 aaPredicted RBP9.68□□□□□ -0.86
LRRC28-216ENST00000559819 OPRL1P41146 370 aa9.68□□□□□ -0.86
LRRC28-216ENST00000559819 ARHGDIAP52565 204 aa9.68□□□□□ -0.86
LRRC28-216ENST00000559819 HTRA3P83110 453 aa9.68□□□□□ -0.86
LRRC28-216ENST00000559819 MEF2AQ02078 507 aaPredicted RBP9.68□□□□□ -0.86
LRRC28-216ENST00000559819 TMEM115Q12893 351 aaPredicted RBP9.68□□□□□ -0.86
LRRC28-216ENST00000559819 IL18R1Q13478 541 aa9.68□□□□□ -0.86
LRRC28-216ENST00000559819 NR1D2Q14995 579 aa9.68□□□□□ -0.86
LRRC28-216ENST00000559819 ZNF284Q2VY69 593 aa9.68□□□□□ -0.86
LRRC28-216ENST00000559819 IQCCQ4KMZ1 466 aa9.68□□□□□ -0.86
LRRC28-216ENST00000559819 COX20Q5RI15 118 aa9.68□□□□□ -0.86
LRRC28-216ENST00000559819 PLPP4Q5VZY2 271 aa9.68□□□□□ -0.86
LRRC28-216ENST00000559819 CAPN13Q6MZZ7 669 aaPredicted RBP9.68□□□□□ -0.86
LRRC28-216ENST00000559819 ANGPTL8Q6UXH0 198 aa9.68□□□□□ -0.86
LRRC28-216ENST00000559819 TECPR1Q7Z6L1 1165 aa9.68□□□□□ -0.86
LRRC28-216ENST00000559819 REM2Q8IYK8 340 aaPredicted RBP9.68□□□□□ -0.86
LRRC28-216ENST00000559819 NAGSQ8N159 534 aa9.68□□□□□ -0.86
LRRC28-216ENST00000559819 OR4K1Q8NGD4 311 aa9.68□□□□□ -0.86
LRRC28-216ENST00000559819 OR4A15Q8NGL6 344 aa9.68□□□□□ -0.86
LRRC28-216ENST00000559819 GLYATL1Q969I3 302 aa9.68□□□□□ -0.86
LRRC28-216ENST00000559819 ZNF566Q969W8 418 aa9.68□□□□□ -0.86
LRRC28-216ENST00000559819 ZSWIM3Q96MP5 696 aa9.68□□□□□ -0.86
LRRC28-216ENST00000559819 ALOXE3Q9BYJ1 711 aa9.68□□□□□ -0.86
LRRC28-216ENST00000559819 CHST8Q9H2A9 424 aa9.68□□□□□ -0.86
LRRC28-216ENST00000559819 TDP1Q9NUW8 608 aa9.68□□□□□ -0.86
LRRC28-216ENST00000559819 RAPGEFL1Q9UHV5 662 aa9.68□□□□□ -0.86
LRRC28-216ENST00000559819 MAFFQ9ULX9 164 aa9.68□□□□□ -0.86
LRRC28-216ENST00000559819 C1orf226A1L170 272 aa9.68□□□□□ -0.86
LRRC28-216ENST00000559819 H0YIV9 168 aa9.68□□□□□ -0.86
LRRC28-216ENST00000559819 PCDH7O60245 1069 aa9.68□□□□□ -0.86
LRRC28-216ENST00000559819 PRMT3O60678 531 aa9.68□□□□□ -0.86
LRRC28-216ENST00000559819 UGDHO60701 494 aa9.68□□□□□ -0.86
LRRC28-216ENST00000559819 ATG13O75143 517 aa9.68□□□□□ -0.86
LRRC28-216ENST00000559819 GCM2O75603 506 aaPredicted RBP9.68□□□□□ -0.86
LRRC28-216ENST00000559819 CATP04040 527 aaKnown RBP9.68□□□□□ -0.86
LRRC28-216ENST00000559819 TGFBR1P36897 503 aa9.68□□□□□ -0.86
LRRC28-216ENST00000559819 HNRNPFP52597 415 aaKnown RBP9.68□□□□□ -0.86
LRRC28-216ENST00000559819 ITGA1P56199 1179 aa9.68□□□□□ -0.86
LRRC28-216ENST00000559819 DCDC1P59894 354 aa9.68□□□□□ -0.86
LRRC28-216ENST00000559819 KCNJ10P78508 379 aa9.68□□□□□ -0.86
LRRC28-216ENST00000559819 MC1RQ01726 317 aa9.68□□□□□ -0.86
LRRC28-216ENST00000559819 KCNC3Q14003 757 aa9.68□□□□□ -0.86
LRRC28-216ENST00000559819 DGCR6Q14129 220 aa9.68□□□□□ -0.86
LRRC28-216ENST00000559819 ERICH5Q6P6B1 374 aa9.68□□□□□ -0.86
LRRC28-216ENST00000559819 PARS2Q7L3T8 475 aaKnown RBP9.68□□□□□ -0.86
LRRC28-216ENST00000559819 ANKRD13BQ86YJ7 626 aa9.68□□□□□ -0.86
LRRC28-216ENST00000559819 NPAS3Q8IXF0 933 aa9.68□□□□□ -0.86
LRRC28-216ENST00000559819 PGBD3Q8N328 593 aa9.68□□□□□ -0.86
LRRC28-216ENST00000559819 NDNFQ8TB73 568 aa9.68□□□□□ -0.86
LRRC28-216ENST00000559819 ZFP90Q8TF47 636 aa9.68□□□□□ -0.86
LRRC28-216ENST00000559819 ING5Q8WYH8 240 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms