RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 OR2Y1Q8NGV0 311 aa11.44□□□□□ -0.58
TPM1-216ENST00000558910 UHMK1Q8TAS1 419 aaKnown RBP11.44□□□□□ -0.58
TPM1-216ENST00000558910 ADAMTS17Q8TE56 1095 aa11.44□□□□□ -0.58
TPM1-216ENST00000558910 C8orf44Q96CB5 159 aa11.44□□□□□ -0.58
TPM1-216ENST00000558910 C10orf90Q96M02 699 aa11.44□□□□□ -0.58
TPM1-216ENST00000558910 C17orf62Q9BQA9 187 aa11.44□□□□□ -0.58
TPM1-216ENST00000558910 TRPC4Q9UBN4 977 aa11.44□□□□□ -0.58
TPM1-216ENST00000558910 CTNNAL1Q9UBT7 734 aa11.44□□□□□ -0.58
TPM1-216ENST00000558910 TNRC6AQ8NDV7 1962 aaKnown RBP11.43□□□□□ -0.58
TPM1-216ENST00000558910 ZNF860A6NHJ4 632 aa11.43□□□□□ -0.58
TPM1-216ENST00000558910 EIF3FO00303 357 aaPredicted RBP11.43□□□□□ -0.58
TPM1-216ENST00000558910 SLC16A5O15375 505 aa11.43□□□□□ -0.58
TPM1-216ENST00000558910 LCMT2O60294 686 aaKnown RBP11.43□□□□□ -0.58
TPM1-216ENST00000558910 FKBP9O95302 570 aa11.43□□□□□ -0.58
TPM1-216ENST00000558910 ANXA5P08758 320 aa11.43□□□□□ -0.58
TPM1-216ENST00000558910 PIM1P11309 404 aaPredicted RBP11.43□□□□□ -0.58
TPM1-216ENST00000558910 ZNF37AP17032 561 aaPredicted RBP11.43□□□□□ -0.58
TPM1-216ENST00000558910 IL1RNP18510 177 aa11.43□□□□□ -0.58
TPM1-216ENST00000558910 BCL6P41182 706 aa11.43□□□□□ -0.58
TPM1-216ENST00000558910 HNF4AP41235 474 aa11.43□□□□□ -0.58
TPM1-216ENST00000558910 GDF5P43026 501 aa11.43□□□□□ -0.58
TPM1-216ENST00000558910 PGDP52209 483 aa11.43□□□□□ -0.58
TPM1-216ENST00000558910 CSNK1G2P78368 415 aa11.43□□□□□ -0.58
TPM1-216ENST00000558910 ABATP80404 500 aa11.43□□□□□ -0.58
TPM1-216ENST00000558910 OCA2Q04671 838 aa11.43□□□□□ -0.58
TPM1-216ENST00000558910 TLE1Q04724 770 aa11.43□□□□□ -0.58
TPM1-216ENST00000558910 SP140Q13342 867 aa11.43□□□□□ -0.58
TPM1-216ENST00000558910 BMPR2Q13873 1038 aa11.43□□□□□ -0.58
TPM1-216ENST00000558910 SSPNQ14714 243 aa11.43□□□□□ -0.58
TPM1-216ENST00000558910 IGFBP7Q16270 282 aa11.43□□□□□ -0.58
TPM1-216ENST00000558910 WHAMMP3Q1A5X7 153 aa11.43□□□□□ -0.58
TPM1-216ENST00000558910 ZXDCQ2QGD7 858 aaPredicted RBP11.43□□□□□ -0.58
TPM1-216ENST00000558910 MUM1Q2TAK8 710 aa11.43□□□□□ -0.58
TPM1-216ENST00000558910 KBTBD12Q3ZCT8 623 aa11.43□□□□□ -0.58
TPM1-216ENST00000558910 CRTC2Q53ET0 693 aaPredicted RBP11.43□□□□□ -0.58
TPM1-216ENST00000558910 CATSPEREQ5SY80 951 aa11.43□□□□□ -0.58
TPM1-216ENST00000558910 ZNF425Q6IV72 752 aa11.43□□□□□ -0.58
TPM1-216ENST00000558910 ATG14Q6ZNE5 492 aa11.43□□□□□ -0.58
TPM1-216ENST00000558910 OVCH1Q7RTY7 1134 aa11.43□□□□□ -0.58
TPM1-216ENST00000558910 PRSS41Q7RTY9 318 aa11.43□□□□□ -0.58
TPM1-216ENST00000558910 PPP1R32Q7Z5V6 425 aa11.43□□□□□ -0.58
TPM1-216ENST00000558910 CMC1Q7Z7K0 106 aa11.43□□□□□ -0.58
TPM1-216ENST00000558910 GALNT7Q86SF2 657 aa11.43□□□□□ -0.58
TPM1-216ENST00000558910 NKAPQ8N5F7 415 aaKnown RBP11.43□□□□□ -0.58
TPM1-216ENST00000558910 FBXO15Q8NCQ5 510 aaPredicted RBP11.43□□□□□ -0.58
TPM1-216ENST00000558910 FDCSPQ8NFU4 85 aa11.43□□□□□ -0.58
TPM1-216ENST00000558910 SEC14L1Q92503 715 aa11.43□□□□□ -0.58
TPM1-216ENST00000558910 ESAMQ96AP7 390 aa11.43□□□□□ -0.58
TPM1-216ENST00000558910 PTERQ96BW5 349 aa11.43□□□□□ -0.58
TPM1-216ENST00000558910 MIEF2Q96C03 454 aa11.43□□□□□ -0.58
TPM1-216ENST00000558910 OR2A5Q96R48 311 aa11.43□□□□□ -0.58
TPM1-216ENST00000558910 DHRS4Q9BTZ2 278 aa11.43□□□□□ -0.58
TPM1-216ENST00000558910 NUDT9Q9BW91 350 aa11.43□□□□□ -0.58
TPM1-216ENST00000558910 RBCK1Q9BYM8 510 aa11.43□□□□□ -0.58
TPM1-216ENST00000558910 EPN3Q9H201 632 aa11.43□□□□□ -0.58
TPM1-216ENST00000558910 RHOJQ9H4E5 214 aa11.43□□□□□ -0.58
TPM1-216ENST00000558910 LRRC4CQ9HCJ2 640 aa11.43□□□□□ -0.58
TPM1-216ENST00000558910 P4HTMQ9NXG6 502 aa11.43□□□□□ -0.58
TPM1-216ENST00000558910 NSMCE4AQ9NXX6 385 aa11.43□□□□□ -0.58
TPM1-216ENST00000558910 HCN3Q9P1Z3 774 aa11.43□□□□□ -0.58
TPM1-216ENST00000558910 CORO1CQ9ULV4 474 aaPredicted RBP11.43□□□□□ -0.58
TPM1-216ENST00000558910 DYRK1BQ9Y463 629 aa11.43□□□□□ -0.58
TPM1-216ENST00000558910 PCM1Q15154 2024 aa11.43□□□□□ -0.58
TPM1-216ENST00000558910 MED13Q9UHV7 2174 aa11.43□□□□□ -0.58
TPM1-216ENST00000558910 HELZ2Q9BYK8 2649 aaKnown RBP11.42□□□□□ -0.58
TPM1-216ENST00000558910 OR2W5A6NFC9 320 aa11.42□□□□□ -0.58
TPM1-216ENST00000558910 SGK494L7N484 410 aa11.42□□□□□ -0.58
TPM1-216ENST00000558910 EIF3HO15372 352 aaKnown RBP eCLIP11.42□□□□□ -0.58
TPM1-216ENST00000558910 SUV39H1O43463 412 aa11.42□□□□□ -0.58
TPM1-216ENST00000558910 OR1F1O43749 312 aa11.42□□□□□ -0.58
TPM1-216ENST00000558910 B3GALT4O96024 378 aa11.42□□□□□ -0.58
TPM1-216ENST00000558910 CCDC166P0CW27 439 aa11.42□□□□□ -0.58
TPM1-216ENST00000558910 EZRP15311 586 aaKnown RBP11.42□□□□□ -0.58
TPM1-216ENST00000558910 ITGA3P26006 1051 aa11.42□□□□□ -0.58
TPM1-216ENST00000558910 RNF144AP50876 292 aaPredicted RBP11.42□□□□□ -0.58
TPM1-216ENST00000558910 MLLT10P55197 1068 aa11.42□□□□□ -0.58
TPM1-216ENST00000558910 CAV1Q03135 178 aa11.42□□□□□ -0.58
TPM1-216ENST00000558910 EEF1A2Q05639 463 aaKnown RBP11.42□□□□□ -0.58
TPM1-216ENST00000558910 KLC1Q07866 573 aa11.42□□□□□ -0.58
TPM1-216ENST00000558910 CSHL1Q14406 222 aa11.42□□□□□ -0.58
TPM1-216ENST00000558910 NAA25Q14CX7 972 aa11.42□□□□□ -0.58
TPM1-216ENST00000558910 RBBP5Q15291 538 aaKnown RBP11.42□□□□□ -0.58
TPM1-216ENST00000558910 NADK2Q4G0N4 442 aa11.42□□□□□ -0.58
TPM1-216ENST00000558910 ZNF740Q8NDX6 193 aa11.42□□□□□ -0.58
TPM1-216ENST00000558910 OR9A4Q8NGU2 314 aa11.42□□□□□ -0.58
TPM1-216ENST00000558910 STT3BQ8TCJ2 826 aa11.42□□□□□ -0.58
TPM1-216ENST00000558910 MAGEB10Q96LZ2 347 aaPredicted RBP11.42□□□□□ -0.58
TPM1-216ENST00000558910 ZNF285Q96NJ3 590 aa11.42□□□□□ -0.58
TPM1-216ENST00000558910 CRB3Q9BUF7 120 aa11.42□□□□□ -0.58
TPM1-216ENST00000558910 SPNS1Q9H2V7 528 aa11.42□□□□□ -0.58
TPM1-216ENST00000558910 TMEM184CQ9NVA4 438 aa11.42□□□□□ -0.58
TPM1-216ENST00000558910 ANKMY1Q9P2S6 941 aa11.42□□□□□ -0.58
TPM1-216ENST00000558910 DMGDHQ9UI17 866 aaKnown RBP11.42□□□□□ -0.58
TPM1-216ENST00000558910 C3orf18Q9UK00 162 aa11.42□□□□□ -0.58
TPM1-216ENST00000558910 FBXL4Q9UKA2 621 aa11.42□□□□□ -0.58
TPM1-216ENST00000558910 PCSK5Q92824 1860 aa11.42□□□□□ -0.58
TPM1-216ENST00000558910 CTAGE15A4D2H0 777 aa11.41□□□□□ -0.58
TPM1-216ENST00000558910 FITM1A5D6W6 292 aa11.41□□□□□ -0.58
TPM1-216ENST00000558910 FAM159BA6NKW6 160 aa11.41□□□□□ -0.58
TPM1-216ENST00000558910 CLGNO14967 610 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms