RNA–Protein interactions for RNA: ENST00000558879.5

LRRC28-210, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4 BASIC

Gene LRRC28, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-210ENST00000558879 ZADH2Q8N4Q0 377 aa16.14■□□□□ 0.17
LRRC28-210ENST00000558879 C8orf44Q96CB5 159 aa16.14■□□□□ 0.17
LRRC28-210ENST00000558879 KRT12Q99456 494 aa16.14■□□□□ 0.17
LRRC28-210ENST00000558879 WDR77Q9BQA1 342 aaPredicted RBP16.14■□□□□ 0.17
LRRC28-210ENST00000558879 IKZF3Q9UKT9 509 aa16.14■□□□□ 0.17
LRRC28-210ENST00000558879 VWA7Q9Y334 891 aa16.14■□□□□ 0.17
LRRC28-210ENST00000558879 PCDHGA10Q9Y5H3 936 aa16.14■□□□□ 0.17
LRRC28-210ENST00000558879 IGHV1-45A0A0A0MS14 117 aa16.13■□□□□ 0.17
LRRC28-210ENST00000558879 CYSRT1A8MQ03 144 aa16.13■□□□□ 0.17
LRRC28-210ENST00000558879 NDC80O14777 642 aa16.13■□□□□ 0.17
LRRC28-210ENST00000558879 ANXA5P08758 320 aa16.13■□□□□ 0.17
LRRC28-210ENST00000558879 HIST1H2AGP0C0S8 130 aaPredicted RBP16.13■□□□□ 0.17
LRRC28-210ENST00000558879 CDH1P12830 882 aa16.13■□□□□ 0.17
LRRC28-210ENST00000558879 NPPBP16860 134 aa16.13■□□□□ 0.17
LRRC28-210ENST00000558879 HIST1H2ADP20671 130 aa16.13■□□□□ 0.17
LRRC28-210ENST00000558879 BCL6P41182 706 aa16.13■□□□□ 0.17
LRRC28-210ENST00000558879 AGAP7PQ5VUJ5 663 aa16.13■□□□□ 0.17
LRRC28-210ENST00000558879 DUPD1Q68J44 220 aa16.13■□□□□ 0.17
LRRC28-210ENST00000558879 CAPN13Q6MZZ7 669 aaPredicted RBP16.13■□□□□ 0.17
LRRC28-210ENST00000558879 TMEM205Q6UW68 189 aa16.13■□□□□ 0.17
LRRC28-210ENST00000558879 CUZD1Q86UP6 607 aa16.13■□□□□ 0.17
LRRC28-210ENST00000558879 PARP9Q8IXQ6 854 aa16.13■□□□□ 0.17
LRRC28-210ENST00000558879 ABHD11Q8NFV4 315 aa16.13■□□□□ 0.17
LRRC28-210ENST00000558879 FBXL8Q96CD0 374 aa16.13■□□□□ 0.17
LRRC28-210ENST00000558879 SNRNP40Q96DI7 357 aaKnown RBP16.13■□□□□ 0.17
LRRC28-210ENST00000558879 THOC3Q96J01 351 aaKnown RBP16.13■□□□□ 0.17
LRRC28-210ENST00000558879 HIST1H2AHQ96KK5 128 aa16.13■□□□□ 0.17
LRRC28-210ENST00000558879 AGAP4Q96P64 663 aa16.13■□□□□ 0.17
LRRC28-210ENST00000558879 OR4K3Q96R72 315 aa16.13■□□□□ 0.17
LRRC28-210ENST00000558879 BARD1Q99728 777 aaKnown RBP16.13■□□□□ 0.17
LRRC28-210ENST00000558879 HIST1H2AJQ99878 128 aa16.13■□□□□ 0.17
LRRC28-210ENST00000558879 HAUS8Q9BT25 410 aa16.13■□□□□ 0.17
LRRC28-210ENST00000558879 H2AFJQ9BTM1 129 aa16.13■□□□□ 0.17
LRRC28-210ENST00000558879 SLC29A3Q9BZD2 475 aa16.13■□□□□ 0.17
LRRC28-210ENST00000558879 ILKAPQ9H0C8 392 aaPredicted RBP16.13■□□□□ 0.17
LRRC28-210ENST00000558879 ZNF160Q9HCG1 818 aa16.13■□□□□ 0.17
LRRC28-210ENST00000558879 ARL15Q9NXU5 204 aa16.13■□□□□ 0.17
LRRC28-210ENST00000558879 NOVA2Q9UNW9 492 aaKnown RBP16.13■□□□□ 0.17
LRRC28-210ENST00000558879 FAM95CA0A1B0GW59 222 aa16.12■□□□□ 0.17
LRRC28-210ENST00000558879 TCP11X1B4DZS4 312 aa16.12■□□□□ 0.17
LRRC28-210ENST00000558879 LCMT2O60294 686 aaKnown RBP16.12■□□□□ 0.17
LRRC28-210ENST00000558879 BMP10O95393 424 aa16.12■□□□□ 0.17
LRRC28-210ENST00000558879 STATHP02808 62 aa16.12■□□□□ 0.17
LRRC28-210ENST00000558879 CYC1P08574 325 aa16.12■□□□□ 0.17
LRRC28-210ENST00000558879 EMP2P54851 167 aa16.12■□□□□ 0.17
LRRC28-210ENST00000558879 MAT1AQ00266 395 aaKnown RBP16.12■□□□□ 0.17
LRRC28-210ENST00000558879 CAMKVQ8NCB2 501 aa16.12■□□□□ 0.17
LRRC28-210ENST00000558879 BBOF1Q8ND07 529 aa16.12■□□□□ 0.17
LRRC28-210ENST00000558879 OR4K1Q8NGD4 311 aa16.12■□□□□ 0.17
LRRC28-210ENST00000558879 OR9A4Q8NGU2 314 aa16.12■□□□□ 0.17
LRRC28-210ENST00000558879 ANKRD7Q92527 254 aa16.12■□□□□ 0.17
LRRC28-210ENST00000558879 PYCR2Q96C36 320 aa16.12■□□□□ 0.17
LRRC28-210ENST00000558879 FAM129AQ9BZQ8 928 aa16.12■□□□□ 0.17
LRRC28-210ENST00000558879 SNX24Q9Y343 169 aa16.12■□□□□ 0.17
LRRC28-210ENST00000558879 POLEQ07864 2286 aa16.12■□□□□ 0.17
LRRC28-210ENST00000558879 NSG1A0A0A6YYJ2 146 aa16.11■□□□□ 0.17
LRRC28-210ENST00000558879 FEZF1A0PJY2 475 aa16.11■□□□□ 0.17
LRRC28-210ENST00000558879 FAM187AA6NFU0 413 aa16.11■□□□□ 0.17
LRRC28-210ENST00000558879 WISP3O95389 354 aaPredicted RBP16.11■□□□□ 0.17
LRRC28-210ENST00000558879 IL1RNP18510 177 aa16.11■□□□□ 0.17
LRRC28-210ENST00000558879 SOX11P35716 441 aa16.11■□□□□ 0.17
LRRC28-210ENST00000558879 AVPR1BP47901 424 aa16.11■□□□□ 0.17
LRRC28-210ENST00000558879 TAS2R39P59534 338 aa16.11■□□□□ 0.17
LRRC28-210ENST00000558879 MFAP5Q13361 173 aa16.11■□□□□ 0.17
LRRC28-210ENST00000558879 ZNF460Q14592 562 aa16.11■□□□□ 0.17
LRRC28-210ENST00000558879 PCOLCEQ15113 449 aa16.11■□□□□ 0.17
LRRC28-210ENST00000558879 IRAK1BP1Q5VVH5 260 aa16.11■□□□□ 0.17
LRRC28-210ENST00000558879 NDUFAF7Q7L592 441 aa16.11■□□□□ 0.17
LRRC28-210ENST00000558879 STRA8Q7Z7C7 330 aa16.11■□□□□ 0.17
LRRC28-210ENST00000558879 ASPGQ86U10 573 aa16.11■□□□□ 0.17
LRRC28-210ENST00000558879 ZBED8Q8IZ13 594 aa16.11■□□□□ 0.17
LRRC28-210ENST00000558879 SHISA5Q8N114 240 aa16.11■□□□□ 0.17
LRRC28-210ENST00000558879 MFSD9Q8NBP5 474 aa16.11■□□□□ 0.17
LRRC28-210ENST00000558879 KCT2Q8NC54 265 aa16.11■□□□□ 0.17
LRRC28-210ENST00000558879 SPATA4Q8NEY3 305 aa16.11■□□□□ 0.17
LRRC28-210ENST00000558879 ATL1Q8WXF7 558 aa16.11■□□□□ 0.17
LRRC28-210ENST00000558879 PSMF1Q92530 271 aa16.11■□□□□ 0.17
LRRC28-210ENST00000558879 C19orf60Q96EN9 201 aa16.11■□□□□ 0.17
LRRC28-210ENST00000558879 TRIM54Q9BYV2 358 aa16.11■□□□□ 0.17
LRRC28-210ENST00000558879 SPNS1Q9H2V7 528 aa16.11■□□□□ 0.17
LRRC28-210ENST00000558879 RHOJQ9H4E5 214 aa16.11■□□□□ 0.17
LRRC28-210ENST00000558879 EPS8L2Q9H6S3 715 aa16.11■□□□□ 0.17
LRRC28-210ENST00000558879 SMYD2Q9NRG4 433 aa16.11■□□□□ 0.17
LRRC28-210ENST00000558879 RIC8BQ9NVN3 520 aa16.11■□□□□ 0.17
LRRC28-210ENST00000558879 ASF1BQ9NVP2 202 aa16.11■□□□□ 0.17
LRRC28-210ENST00000558879 NSMCE4AQ9NXX6 385 aa16.11■□□□□ 0.17
LRRC28-210ENST00000558879 GRHL1Q9NZI5 618 aa16.11■□□□□ 0.17
LRRC28-210ENST00000558879 WHRNQ9P202 907 aa16.11■□□□□ 0.17
LRRC28-210ENST00000558879 NTNG1Q9Y2I2 539 aa16.11■□□□□ 0.17
LRRC28-210ENST00000558879 EIF3HO15372 352 aaKnown RBP eCLIP16.1■□□□□ 0.17
LRRC28-210ENST00000558879 RAD51CO43502 376 aa16.1■□□□□ 0.17
LRRC28-210ENST00000558879 KLHL18O94889 574 aa16.1■□□□□ 0.17
LRRC28-210ENST00000558879 HEXBP07686 556 aa16.1■□□□□ 0.17
LRRC28-210ENST00000558879 SLC35G6P0C7Q6 338 aa16.1■□□□□ 0.17
LRRC28-210ENST00000558879 PRR35P0CG20 571 aa16.1■□□□□ 0.17
LRRC28-210ENST00000558879 GRK3P35626 688 aa16.1■□□□□ 0.17
LRRC28-210ENST00000558879 TSFMP43897 325 aaKnown RBP16.1■□□□□ 0.17
LRRC28-210ENST00000558879 CDKL1Q00532 357 aa16.1■□□□□ 0.17
LRRC28-210ENST00000558879 EEF1A2Q05639 463 aaKnown RBP16.1■□□□□ 0.17
LRRC28-210ENST00000558879 MRPL49Q13405 166 aaKnown RBP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms