RNA–Protein interactions for RNA: ENST00000558103.1

CLPX-202, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 5

Gene CLPX, Length 605 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-202ENST00000558103 ARMC12Q5T9G4 340 aa5.9□□□□□ -1.46
CLPX-202ENST00000558103 TEDDM1Q5T9Z0 273 aa5.9□□□□□ -1.46
CLPX-202ENST00000558103 MARC1Q5VT66 337 aa5.9□□□□□ -1.46
CLPX-202ENST00000558103 TXNRD3NBQ6F5E7 133 aa5.9□□□□□ -1.46
CLPX-202ENST00000558103 RGS7BPQ6MZT1 257 aaPredicted RBP5.9□□□□□ -1.46
CLPX-202ENST00000558103 TMCO3Q6UWJ1 677 aa5.9□□□□□ -1.46
CLPX-202ENST00000558103 CEACAM20Q6UY09 585 aa5.9□□□□□ -1.46
CLPX-202ENST00000558103 MARK2Q7KZI7 788 aaKnown RBP5.9□□□□□ -1.46
CLPX-202ENST00000558103 ZNF551Q7Z340 670 aaPredicted RBP5.9□□□□□ -1.46
CLPX-202ENST00000558103 GAS2L3Q86XJ1 694 aa5.9□□□□□ -1.46
CLPX-202ENST00000558103 GALNT13Q8IUC8 556 aa5.9□□□□□ -1.46
CLPX-202ENST00000558103 LURAP1LQ8IV03 231 aa5.9□□□□□ -1.46
CLPX-202ENST00000558103 NRSN1Q8IZ57 195 aa5.9□□□□□ -1.46
CLPX-202ENST00000558103 BBS5Q8N3I7 341 aa5.9□□□□□ -1.46
CLPX-202ENST00000558103 ATPAF2Q8N5M1 289 aa5.9□□□□□ -1.46
CLPX-202ENST00000558103 TEX26Q8N6G2 289 aa5.9□□□□□ -1.46
CLPX-202ENST00000558103 EXD1Q8NHP7 514 aa5.9□□□□□ -1.46
CLPX-202ENST00000558103 NTN5Q8WTR8 489 aaPredicted RBP5.9□□□□□ -1.46
CLPX-202ENST00000558103 MIB2Q96AX9 1013 aa5.9□□□□□ -1.46
CLPX-202ENST00000558103 APIPQ96GX9 242 aa5.9□□□□□ -1.46
CLPX-202ENST00000558103 ZNF764Q96H86 408 aaPredicted RBP5.9□□□□□ -1.46
CLPX-202ENST00000558103 WDR24Q96S15 920 aa5.9□□□□□ -1.46
CLPX-202ENST00000558103 LYSMD1Q96S90 227 aa5.9□□□□□ -1.46
CLPX-202ENST00000558103 CTRCQ99895 268 aa5.9□□□□□ -1.46
CLPX-202ENST00000558103 ZPBPQ9BS86 351 aa5.9□□□□□ -1.46
CLPX-202ENST00000558103 EFHD1Q9BUP0 239 aa5.9□□□□□ -1.46
CLPX-202ENST00000558103 TDRD1Q9BXT4 1180 aaKnown RBP5.9□□□□□ -1.46
CLPX-202ENST00000558103 POLR1EQ9GZS1 481 aaKnown RBP5.9□□□□□ -1.46
CLPX-202ENST00000558103 ARFGAP3Q9NP61 516 aa5.9□□□□□ -1.46
CLPX-202ENST00000558103 ZNF71Q9NQZ8 489 aaPredicted RBP5.9□□□□□ -1.46
CLPX-202ENST00000558103 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.9□□□□□ -1.46
CLPX-202ENST00000558103 CHMP5Q9NZZ3 219 aa5.9□□□□□ -1.46
CLPX-202ENST00000558103 VPS18Q9P253 973 aa5.9□□□□□ -1.46
CLPX-202ENST00000558103 CNOT8Q9UFF9 292 aaKnown RBP5.9□□□□□ -1.46
CLPX-202ENST00000558103 TBC1D29Q9UFV1 150 aa5.9□□□□□ -1.46
CLPX-202ENST00000558103 MAN2B2Q9Y2E5 1009 aa5.9□□□□□ -1.46
CLPX-202ENST00000558103 SCINQ9Y6U3 715 aa5.9□□□□□ -1.46
CLPX-202ENST00000558103 FER1L5A0AVI2 2057 aa5.9□□□□□ -1.47
CLPX-202ENST00000558103 SPTAN1Q13813 2472 aaKnown RBP5.9□□□□□ -1.47
CLPX-202ENST00000558103 PCM1Q15154 2024 aa5.89□□□□□ -1.47
CLPX-202ENST00000558103 GOLGA6L3A6NEY3 463 aa5.89□□□□□ -1.47
CLPX-202ENST00000558103 LILRA5A6NI73 299 aa5.89□□□□□ -1.47
CLPX-202ENST00000558103 A8MU76 341 aa5.89□□□□□ -1.47
CLPX-202ENST00000558103 ISM1B1AKI9 464 aa5.89□□□□□ -1.47
CLPX-202ENST00000558103 F5H423 210 aaPredicted RBP5.89□□□□□ -1.47
CLPX-202ENST00000558103 IFRD1O00458 451 aaPredicted RBP5.89□□□□□ -1.47
CLPX-202ENST00000558103 INPP4BO15327 924 aa5.89□□□□□ -1.47
CLPX-202ENST00000558103 MFSD11O43934 449 aa5.89□□□□□ -1.47
CLPX-202ENST00000558103 NXPH3O95157 252 aa5.89□□□□□ -1.47
CLPX-202ENST00000558103 C9P02748 559 aa5.89□□□□□ -1.47
CLPX-202ENST00000558103 ATP1A1P05023 1023 aaKnown RBP5.89□□□□□ -1.47
CLPX-202ENST00000558103 F3P13726 295 aa5.89□□□□□ -1.47
CLPX-202ENST00000558103 F8A1P23610 371 aa5.89□□□□□ -1.47
CLPX-202ENST00000558103 IL4RP24394 825 aa5.89□□□□□ -1.47
CLPX-202ENST00000558103 MAN1A1P33908 653 aa5.89□□□□□ -1.47
CLPX-202ENST00000558103 GFERP55789 205 aa5.89□□□□□ -1.47
CLPX-202ENST00000558103 SUMO3P55854 103 aaPredicted RBP5.89□□□□□ -1.47
CLPX-202ENST00000558103 UBE2IP63279 158 aaKnown RBP5.89□□□□□ -1.47
CLPX-202ENST00000558103 RAB32Q13637 225 aa5.89□□□□□ -1.47
CLPX-202ENST00000558103 FAM153CQ494X1 144 aa5.89□□□□□ -1.47
CLPX-202ENST00000558103 LACTB2Q53H82 288 aaPredicted RBP5.89□□□□□ -1.47
CLPX-202ENST00000558103 BOLA3Q53S33 107 aa5.89□□□□□ -1.47
CLPX-202ENST00000558103 HENMT1Q5T8I9 393 aaKnown RBP5.89□□□□□ -1.47
CLPX-202ENST00000558103 ATP1A1-AS1Q5TC04 95 aa5.89□□□□□ -1.47
CLPX-202ENST00000558103 IYDQ6PHW0 289 aa5.89□□□□□ -1.47
CLPX-202ENST00000558103 CLEC17AQ6ZS10 378 aa5.89□□□□□ -1.47
CLPX-202ENST00000558103 ZNF571Q7Z3V5 609 aaPredicted RBP5.89□□□□□ -1.47
CLPX-202ENST00000558103 MAVSQ7Z434 540 aa5.89□□□□□ -1.47
CLPX-202ENST00000558103 KRT78Q8N1N4 520 aa5.89□□□□□ -1.47
CLPX-202ENST00000558103 NIPA2Q8N8Q9 360 aa5.89□□□□□ -1.47
CLPX-202ENST00000558103 ANKRD20A12PQ8NF67 263 aa5.89□□□□□ -1.47
CLPX-202ENST00000558103 FAM71BQ8TC56 605 aa5.89□□□□□ -1.47
CLPX-202ENST00000558103 TEKT4Q8WW24 435 aa5.89□□□□□ -1.47
CLPX-202ENST00000558103 APOBEC4Q8WW27 367 aaKnown RBP5.89□□□□□ -1.47
CLPX-202ENST00000558103 MAML1Q92585 1016 aa5.89□□□□□ -1.47
CLPX-202ENST00000558103 HSPH1Q92598 858 aa5.89□□□□□ -1.47
CLPX-202ENST00000558103 KIAA1143Q96AT1 154 aaPredicted RBP5.89□□□□□ -1.47
CLPX-202ENST00000558103 ZNF653Q96CK0 615 aa5.89□□□□□ -1.47
CLPX-202ENST00000558103 HERPUD2Q9BSE4 406 aa5.89□□□□□ -1.47
CLPX-202ENST00000558103 RIOK2Q9BVS4 552 aaKnown RBP5.89□□□□□ -1.47
CLPX-202ENST00000558103 TBC1D10AQ9BXI6 508 aa5.89□□□□□ -1.47
CLPX-202ENST00000558103 ISCUQ9H1K1 167 aa5.89□□□□□ -1.47
CLPX-202ENST00000558103 STN1Q9H668 368 aaKnown RBP5.89□□□□□ -1.47
CLPX-202ENST00000558103 HAUS4Q9H6D7 363 aa5.89□□□□□ -1.47
CLPX-202ENST00000558103 NT5MQ9NPB1 228 aa5.89□□□□□ -1.47
CLPX-202ENST00000558103 OGFRQ9NZT2 677 aa5.89□□□□□ -1.47
CLPX-202ENST00000558103 CPNE7Q9UBL6 633 aa5.89□□□□□ -1.47
CLPX-202ENST00000558103 DNPEPQ9ULA0 475 aa5.89□□□□□ -1.47
CLPX-202ENST00000558103 TP53TG5Q9Y2B4 290 aa5.89□□□□□ -1.47
CLPX-202ENST00000558103 LRCH1Q9Y2L9 728 aa5.89□□□□□ -1.47
CLPX-202ENST00000558103 MRPS18BQ9Y676 258 aaKnown RBP5.89□□□□□ -1.47
CLPX-202ENST00000558103 PRRC2CQ9Y520 2896 aaKnown RBP5.89□□□□□ -1.47
CLPX-202ENST00000558103 SPTBN1Q01082 2364 aaKnown RBP5.89□□□□□ -1.47
CLPX-202ENST00000558103 CSMD1Q96PZ7 3565 aa5.88□□□□□ -1.47
CLPX-202ENST00000558103 CCDC88CQ9P219 2028 aa5.88□□□□□ -1.47
CLPX-202ENST00000558103 CELSR2Q9HCU4 2923 aa5.88□□□□□ -1.47
CLPX-202ENST00000558103 KIR2DS5A0A0G2JLQ3 304 aa5.88□□□□□ -1.47
CLPX-202ENST00000558103 A0A0G2JNG1 304 aa5.88□□□□□ -1.47
CLPX-202ENST00000558103 OR5K4A6NMS3 321 aa5.88□□□□□ -1.47
CLPX-202ENST00000558103 K7EM74 188 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms