RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 SOWAHCQ53LP3 525 aaPredicted RBP11.91□□□□□ -0.5
SLIRP-211ENST00000557623 MRPL14Q6P1L8 145 aaKnown RBP11.91□□□□□ -0.5
SLIRP-211ENST00000557623 KLC3Q6P597 504 aa11.91□□□□□ -0.5
SLIRP-211ENST00000557623 OVCH1Q7RTY7 1134 aa11.91□□□□□ -0.5
SLIRP-211ENST00000557623 ISCA2Q86U28 154 aa11.91□□□□□ -0.5
SLIRP-211ENST00000557623 CAMKVQ8NCB2 501 aa11.91□□□□□ -0.5
SLIRP-211ENST00000557623 PDPRQ8NCN5 879 aa11.91□□□□□ -0.5
SLIRP-211ENST00000557623 RHEBL1Q8TAI7 183 aa11.91□□□□□ -0.5
SLIRP-211ENST00000557623 UHMK1Q8TAS1 419 aaKnown RBP11.91□□□□□ -0.5
SLIRP-211ENST00000557623 APOBEC4Q8WW27 367 aaKnown RBP11.91□□□□□ -0.5
SLIRP-211ENST00000557623 NEIL2Q969S2 332 aa11.91□□□□□ -0.5
SLIRP-211ENST00000557623 SARGQ9BW04 601 aa11.91□□□□□ -0.5
SLIRP-211ENST00000557623 ADNPQ9H2P0 1102 aa11.91□□□□□ -0.5
SLIRP-211ENST00000557623 ALG9Q9H6U8 611 aa11.91□□□□□ -0.5
SLIRP-211ENST00000557623 ZNF304Q9HCX3 659 aa11.91□□□□□ -0.5
SLIRP-211ENST00000557623 WWOXQ9NZC7 414 aa11.91□□□□□ -0.5
SLIRP-211ENST00000557623 NUDT4Q9NZJ9 180 aa11.91□□□□□ -0.5
SLIRP-211ENST00000557623 CFAP47Q6ZTR5 3102 aa11.9□□□□□ -0.5
SLIRP-211ENST00000557623 TRBC2A0A5B9 178 aa11.9□□□□□ -0.5
SLIRP-211ENST00000557623 FEZF1A0PJY2 475 aa11.9□□□□□ -0.5
SLIRP-211ENST00000557623 ESPNB1AK53 854 aa11.9□□□□□ -0.5
SLIRP-211ENST00000557623 H2AFYO75367 372 aaKnown RBP11.9□□□□□ -0.5
SLIRP-211ENST00000557623 KLHL2O95198 593 aa11.9□□□□□ -0.5
SLIRP-211ENST00000557623 ALDOAP04075 364 aaKnown RBP11.9□□□□□ -0.5
SLIRP-211ENST00000557623 FURINP09958 794 aa11.9□□□□□ -0.5
SLIRP-211ENST00000557623 FAM153BP0C7A2 387 aa11.9□□□□□ -0.5
SLIRP-211ENST00000557623 GNAZP19086 355 aa11.9□□□□□ -0.5
SLIRP-211ENST00000557623 CXCR2P25025 360 aa11.9□□□□□ -0.5
SLIRP-211ENST00000557623 SLC6A12P48065 614 aa11.9□□□□□ -0.5
SLIRP-211ENST00000557623 DLG1Q12959 904 aa11.9□□□□□ -0.5
SLIRP-211ENST00000557623 FAM53BQ14153 422 aa11.9□□□□□ -0.5
SLIRP-211ENST00000557623 SSPNQ14714 243 aa11.9□□□□□ -0.5
SLIRP-211ENST00000557623 ACAP2Q15057 778 aa11.9□□□□□ -0.5
SLIRP-211ENST00000557623 HKDC1Q2TB90 917 aa11.9□□□□□ -0.5
SLIRP-211ENST00000557623 FAM153CQ494X1 144 aa11.9□□□□□ -0.5
SLIRP-211ENST00000557623 ATP1A1-AS1Q5TC04 95 aa11.9□□□□□ -0.5
SLIRP-211ENST00000557623 PCSK4Q6UW60 755 aa11.9□□□□□ -0.5
SLIRP-211ENST00000557623 NXPE4Q6UWF7 544 aa11.9□□□□□ -0.5
SLIRP-211ENST00000557623 ASPGQ86U10 573 aa11.9□□□□□ -0.5
SLIRP-211ENST00000557623 RAB43Q86YS6 212 aa11.9□□□□□ -0.5
SLIRP-211ENST00000557623 PLD3Q8IV08 490 aa11.9□□□□□ -0.5
SLIRP-211ENST00000557623 MFSD9Q8NBP5 474 aa11.9□□□□□ -0.5
SLIRP-211ENST00000557623 OR2Y1Q8NGV0 311 aa11.9□□□□□ -0.5
SLIRP-211ENST00000557623 DCAKDQ8WVC6 231 aa11.9□□□□□ -0.5
SLIRP-211ENST00000557623 KCTD4Q8WVF5 259 aa11.9□□□□□ -0.5
SLIRP-211ENST00000557623 ISL2Q96A47 359 aa11.9□□□□□ -0.5
SLIRP-211ENST00000557623 COL26A1Q96A83 441 aa11.9□□□□□ -0.5
SLIRP-211ENST00000557623 NXNL1Q96CM4 212 aa11.9□□□□□ -0.5
SLIRP-211ENST00000557623 C10orf90Q96M02 699 aa11.9□□□□□ -0.5
SLIRP-211ENST00000557623 TSNARE1Q96NA8 513 aa11.9□□□□□ -0.5
SLIRP-211ENST00000557623 IP6K3Q96PC2 410 aa11.9□□□□□ -0.5
SLIRP-211ENST00000557623 AIF1LQ9BQI0 150 aa11.9□□□□□ -0.5
SLIRP-211ENST00000557623 TXLNGYQ9BZA5 131 aa11.9□□□□□ -0.5
SLIRP-211ENST00000557623 SLC26A1Q9H2B4 701 aa11.9□□□□□ -0.5
SLIRP-211ENST00000557623 WDR54Q9H977 334 aa11.9□□□□□ -0.5
SLIRP-211ENST00000557623 IGSF5Q9NSI5 407 aa11.9□□□□□ -0.5
SLIRP-211ENST00000557623 GPRC5BQ9NZH0 403 aa11.9□□□□□ -0.5
SLIRP-211ENST00000557623 NXT1Q9UKK6 140 aaKnown RBP11.9□□□□□ -0.5
SLIRP-211ENST00000557623 MAN2B2Q9Y2E5 1009 aa11.9□□□□□ -0.5
SLIRP-211ENST00000557623 PTRH2Q9Y3E5 179 aaKnown RBP11.9□□□□□ -0.5
SLIRP-211ENST00000557623 FAM208BQ5VWN6 2430 aa11.9□□□□□ -0.5
SLIRP-211ENST00000557623 SCN3AQ9NY46 2000 aa11.89□□□□□ -0.51
SLIRP-211ENST00000557623 SUPT3HB4E1H0 165 aa11.89□□□□□ -0.51
SLIRP-211ENST00000557623 CLGNO14967 610 aa11.89□□□□□ -0.51
SLIRP-211ENST00000557623 TAPBPO15533 448 aa11.89□□□□□ -0.51
SLIRP-211ENST00000557623 OR1F1O43749 312 aa11.89□□□□□ -0.51
SLIRP-211ENST00000557623 LCMT2O60294 686 aaKnown RBP11.89□□□□□ -0.51
SLIRP-211ENST00000557623 SUPT3HO75486 399 aa11.89□□□□□ -0.51
SLIRP-211ENST00000557623 STK16O75716 305 aa11.89□□□□□ -0.51
SLIRP-211ENST00000557623 KLF7O75840 302 aaPredicted RBP11.89□□□□□ -0.51
SLIRP-211ENST00000557623 SNRPAP09012 282 aaKnown RBP11.89□□□□□ -0.51
SLIRP-211ENST00000557623 SLC35G6P0C7Q6 338 aa11.89□□□□□ -0.51
SLIRP-211ENST00000557623 COL6A2P12110 1019 aa11.89□□□□□ -0.51
SLIRP-211ENST00000557623 ITGAXP20702 1163 aa11.89□□□□□ -0.51
SLIRP-211ENST00000557623 FBLP22087 321 aaKnown RBP11.89□□□□□ -0.51
SLIRP-211ENST00000557623 BCL6P41182 706 aa11.89□□□□□ -0.51
SLIRP-211ENST00000557623 MAGEA12P43365 314 aa11.89□□□□□ -0.51
SLIRP-211ENST00000557623 OR1D4P47884 311 aa11.89□□□□□ -0.51
SLIRP-211ENST00000557623 AVPR1BP47901 424 aa11.89□□□□□ -0.51
SLIRP-211ENST00000557623 POLE2P56282 527 aa11.89□□□□□ -0.51
SLIRP-211ENST00000557623 NFKB2Q00653 900 aa11.89□□□□□ -0.51
SLIRP-211ENST00000557623 OCA2Q04671 838 aa11.89□□□□□ -0.51
SLIRP-211ENST00000557623 CDC16Q13042 620 aa11.89□□□□□ -0.51
SLIRP-211ENST00000557623 IL10RAQ13651 578 aa11.89□□□□□ -0.51
SLIRP-211ENST00000557623 SLC9A5Q14940 896 aa11.89□□□□□ -0.51
SLIRP-211ENST00000557623 CATSPEREQ5SY80 951 aa11.89□□□□□ -0.51
SLIRP-211ENST00000557623 COX15Q7KZN9 410 aa11.89□□□□□ -0.51
SLIRP-211ENST00000557623 VN1R4Q7Z5H5 301 aa11.89□□□□□ -0.51
SLIRP-211ENST00000557623 TMPRSS11BQ86T26 416 aa11.89□□□□□ -0.51
SLIRP-211ENST00000557623 CENPLQ8N0S6 344 aaPredicted RBP11.89□□□□□ -0.51
SLIRP-211ENST00000557623 ADAMTS17Q8TE56 1095 aa11.89□□□□□ -0.51
SLIRP-211ENST00000557623 SLC13A3Q8WWT9 602 aa11.89□□□□□ -0.51
SLIRP-211ENST00000557623 EXT2Q93063 718 aa11.89□□□□□ -0.51
SLIRP-211ENST00000557623 NACC2Q96BF6 587 aa11.89□□□□□ -0.51
SLIRP-211ENST00000557623 MTBPQ96DY7 904 aa11.89□□□□□ -0.51
SLIRP-211ENST00000557623 TM4SF19Q96DZ7 209 aa11.89□□□□□ -0.51
SLIRP-211ENST00000557623 BBC3Q96PG8 261 aaPredicted RBP11.89□□□□□ -0.51
SLIRP-211ENST00000557623 ATOH8Q96SQ7 321 aa11.89□□□□□ -0.51
SLIRP-211ENST00000557623 CCDC77Q9BR77 488 aa11.89□□□□□ -0.51
SLIRP-211ENST00000557623 TMEM79Q9BSE2 394 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms