RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 TAS2R42Q7RTR8 314 aa5.57□□□□□ -1.52
VPS33B-207ENST00000557470 SERPINA9Q86WD7 417 aa5.57□□□□□ -1.52
VPS33B-207ENST00000557470 KBTBD2Q8IY47 623 aa5.57□□□□□ -1.52
VPS33B-207ENST00000557470 PIANPQ8IYJ0 282 aa5.57□□□□□ -1.52
VPS33B-207ENST00000557470 TBC1D21Q8IYX1 336 aa5.57□□□□□ -1.52
VPS33B-207ENST00000557470 AMER2Q8N7J2 671 aa5.57□□□□□ -1.52
VPS33B-207ENST00000557470 NKAIN3Q8N8D7 197 aa5.57□□□□□ -1.52
VPS33B-207ENST00000557470 LINC01555Q8NAE3 123 aa5.57□□□□□ -1.52
VPS33B-207ENST00000557470 FAM156AQ8NDB6 213 aa5.57□□□□□ -1.52
VPS33B-207ENST00000557470 CCDC110Q8TBZ0 833 aa5.57□□□□□ -1.52
VPS33B-207ENST00000557470 STK35Q8TDR2 534 aa5.57□□□□□ -1.52
VPS33B-207ENST00000557470 DENND1AQ8TEH3 1009 aa5.57□□□□□ -1.52
VPS33B-207ENST00000557470 HAS2Q92819 552 aa5.57□□□□□ -1.52
VPS33B-207ENST00000557470 HAUS1Q96CS2 278 aa5.57□□□□□ -1.52
VPS33B-207ENST00000557470 VPS50Q96JG6 964 aa5.57□□□□□ -1.52
VPS33B-207ENST00000557470 DNAJC1Q96KC8 554 aaKnown RBP5.57□□□□□ -1.52
VPS33B-207ENST00000557470 QKIQ96PU8 341 aaKnown RBP eCLIP5.57□□□□□ -1.52
VPS33B-207ENST00000557470 VAT1Q99536 393 aa5.57□□□□□ -1.52
VPS33B-207ENST00000557470 BPIFA3Q9BQP9 254 aa5.57□□□□□ -1.52
VPS33B-207ENST00000557470 CENPOQ9BU64 300 aa5.57□□□□□ -1.52
VPS33B-207ENST00000557470 NAT10Q9H0A0 1025 aaKnown RBP5.57□□□□□ -1.52
VPS33B-207ENST00000557470 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.57□□□□□ -1.52
VPS33B-207ENST00000557470 C10orf88Q9H8K7 445 aa5.57□□□□□ -1.52
VPS33B-207ENST00000557470 EMC7Q9NPA0 242 aa5.57□□□□□ -1.52
VPS33B-207ENST00000557470 C14orf119Q9NWQ9 140 aa5.57□□□□□ -1.52
VPS33B-207ENST00000557470 CIDEBQ9UHD4 219 aa5.57□□□□□ -1.52
VPS33B-207ENST00000557470 TINAGQ9UJW2 476 aa5.57□□□□□ -1.52
VPS33B-207ENST00000557470 C3orf18Q9UK00 162 aa5.57□□□□□ -1.52
VPS33B-207ENST00000557470 CAPN11Q9UMQ6 739 aa5.57□□□□□ -1.52
VPS33B-207ENST00000557470 HYOU1Q9Y4L1 999 aa5.57□□□□□ -1.52
VPS33B-207ENST00000557470 CORINQ9Y5Q5 1042 aa5.57□□□□□ -1.52
VPS33B-207ENST00000557470 PRSS21Q9Y6M0 314 aa5.57□□□□□ -1.52
VPS33B-207ENST00000557470 CACNA1CQ13936 2221 aa5.57□□□□□ -1.52
VPS33B-207ENST00000557470 NCOA6Q14686 2063 aaPredicted RBP5.57□□□□□ -1.52
VPS33B-207ENST00000557470 DNHD1Q96M86 4753 aa5.56□□□□□ -1.52
VPS33B-207ENST00000557470 NSG1A0A0A6YYJ2 146 aa5.56□□□□□ -1.52
VPS33B-207ENST00000557470 SCO2A0A1W2PP80 73 aa5.56□□□□□ -1.52
VPS33B-207ENST00000557470 SLC5A10A0PJK1 596 aa5.56□□□□□ -1.52
VPS33B-207ENST00000557470 FITM1A5D6W6 292 aa5.56□□□□□ -1.52
VPS33B-207ENST00000557470 NRP2O60462 931 aa5.56□□□□□ -1.52
VPS33B-207ENST00000557470 PRAMEF2O60811 474 aa5.56□□□□□ -1.52
VPS33B-207ENST00000557470 CTSVO60911 334 aa5.56□□□□□ -1.52
VPS33B-207ENST00000557470 ANXA9O76027 345 aa5.56□□□□□ -1.52
VPS33B-207ENST00000557470 AP2A2O94973 939 aa5.56□□□□□ -1.52
VPS33B-207ENST00000557470 RASAL1O95294 804 aa5.56□□□□□ -1.52
VPS33B-207ENST00000557470 CLDN14O95500 239 aa5.56□□□□□ -1.52
VPS33B-207ENST00000557470 AP2A1O95782 977 aa5.56□□□□□ -1.52
VPS33B-207ENST00000557470 WDPCPO95876 746 aa5.56□□□□□ -1.52
VPS33B-207ENST00000557470 SERPINC1P01008 464 aa5.56□□□□□ -1.52
VPS33B-207ENST00000557470 GYPCP04921 128 aa5.56□□□□□ -1.52
VPS33B-207ENST00000557470 SERPINA7P05543 415 aa5.56□□□□□ -1.52
VPS33B-207ENST00000557470 GSTM1P09488 218 aa5.56□□□□□ -1.52
VPS33B-207ENST00000557470 ZGLP1P0C6A0 271 aa5.56□□□□□ -1.52
VPS33B-207ENST00000557470 TMEM253P0C7T8 217 aa5.56□□□□□ -1.52
VPS33B-207ENST00000557470 ESRRAP11474 423 aaPredicted RBP5.56□□□□□ -1.52
VPS33B-207ENST00000557470 FDXRP22570 491 aa5.56□□□□□ -1.52
VPS33B-207ENST00000557470 PSMB4P28070 264 aa5.56□□□□□ -1.52
VPS33B-207ENST00000557470 ARHGAP25P42331 645 aa5.56□□□□□ -1.52
VPS33B-207ENST00000557470 NSG1P42857 185 aa5.56□□□□□ -1.52
VPS33B-207ENST00000557470 STT3AP46977 705 aa5.56□□□□□ -1.52
VPS33B-207ENST00000557470 CARSP49589 748 aaKnown RBP5.56□□□□□ -1.52
VPS33B-207ENST00000557470 RAB28P51157 221 aa5.56□□□□□ -1.52
VPS33B-207ENST00000557470 SMSP52788 366 aa5.56□□□□□ -1.52
VPS33B-207ENST00000557470 CASP6P55212 293 aa5.56□□□□□ -1.52
VPS33B-207ENST00000557470 VSX2P58304 361 aaPredicted RBP5.56□□□□□ -1.52
VPS33B-207ENST00000557470 GSTM4Q03013 218 aa5.56□□□□□ -1.52
VPS33B-207ENST00000557470 OCA2Q04671 838 aa5.56□□□□□ -1.52
VPS33B-207ENST00000557470 TLE4Q04727 773 aa5.56□□□□□ -1.52
VPS33B-207ENST00000557470 EEF1A2Q05639 463 aaKnown RBP5.56□□□□□ -1.52
VPS33B-207ENST00000557470 RBPJQ06330 500 aa5.56□□□□□ -1.52
VPS33B-207ENST00000557470 TFDP2Q14188 446 aa5.56□□□□□ -1.52
VPS33B-207ENST00000557470 SPARCL1Q14515 664 aa5.56□□□□□ -1.52
VPS33B-207ENST00000557470 ZNF267Q14586 743 aaPredicted RBP5.56□□□□□ -1.52
VPS33B-207ENST00000557470 SLC18A3Q16572 532 aa5.56□□□□□ -1.52
VPS33B-207ENST00000557470 TAZQ16635 292 aa5.56□□□□□ -1.52
VPS33B-207ENST00000557470 GPR33Q49SQ1 333 aa5.56□□□□□ -1.52
VPS33B-207ENST00000557470 ODF2Q5BJF6 829 aa5.56□□□□□ -1.52
VPS33B-207ENST00000557470 DENND5AQ6IQ26 1287 aa5.56□□□□□ -1.52
VPS33B-207ENST00000557470 HIBCHQ6NVY1 386 aaPredicted RBP5.56□□□□□ -1.52
VPS33B-207ENST00000557470 CNSTQ6PJW8 725 aa5.56□□□□□ -1.52
VPS33B-207ENST00000557470 FIGLAQ6QHK4 219 aa5.56□□□□□ -1.52
VPS33B-207ENST00000557470 NCCRP1Q6ZVX7 275 aaPredicted RBP5.56□□□□□ -1.52
VPS33B-207ENST00000557470 NDUFAF7Q7L592 441 aa5.56□□□□□ -1.52
VPS33B-207ENST00000557470 TBC1D1Q86TI0 1168 aaPredicted RBP5.56□□□□□ -1.52
VPS33B-207ENST00000557470 TAX1BP1Q86VP1 789 aa5.56□□□□□ -1.52
VPS33B-207ENST00000557470 CEP97Q8IW35 865 aa5.56□□□□□ -1.52
VPS33B-207ENST00000557470 C2orf73Q8N5S3 287 aaPredicted RBP5.56□□□□□ -1.52
VPS33B-207ENST00000557470 OTUD6BQ8N6M0 293 aa5.56□□□□□ -1.52
VPS33B-207ENST00000557470 TTC29Q8NA56 475 aaPredicted RBP5.56□□□□□ -1.52
VPS33B-207ENST00000557470 ZBTB34Q8NCN2 500 aa5.56□□□□□ -1.52
VPS33B-207ENST00000557470 DNAJB8Q8NHS0 232 aa5.56□□□□□ -1.52
VPS33B-207ENST00000557470 STT3BQ8TCJ2 826 aa5.56□□□□□ -1.52
VPS33B-207ENST00000557470 ADAMTS18Q8TE60 1221 aa5.56□□□□□ -1.52
VPS33B-207ENST00000557470 CHTF18Q8WVB6 975 aa5.56□□□□□ -1.52
VPS33B-207ENST00000557470 ELMO1Q92556 727 aa5.56□□□□□ -1.52
VPS33B-207ENST00000557470 P3H4Q92791 437 aa5.56□□□□□ -1.52
VPS33B-207ENST00000557470 DIO2Q92813 273 aa5.56□□□□□ -1.52
VPS33B-207ENST00000557470 MIEF2Q96C03 454 aa5.56□□□□□ -1.52
VPS33B-207ENST00000557470 MTFMTQ96DP5 389 aaKnown RBP5.56□□□□□ -1.52
VPS33B-207ENST00000557470 C14orf79Q96F83 325 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms